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SRX712054: Whole Genome Sequencing of Microbacterium sp. UNCCL10
1 ILLUMINA (Illumina HiSeq 2000) run: 4.4M spots, 1.3G bases, 762.9Mb downloads

Submitted by: DOE JOINT GENOME INSTITUTE (JGI)
Study: Microbacterium sp. UNCCL10 Genome sequencing and assembly
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This is a reference bacterial genome from a study to characterize how plant host genes affect the microbiome community assemblage and how the microbiome influences plant phenotypes, such as drought or salt tolerance, nutrient use, productivity, pathogen resistance, and yield. Plant-associated metagenomes are being characterized by 16S ribotyping, metagenome and reference genome sequencing and metatranscriptome sequencing. Experimental systems used to characterize the interplay between host and associated communities in different plant types have been chosen to be relevant to energy and environmental concerns, for example, Arabidopsis as a model, corn, and a key biofuel crop (Miscanthus).
Sample: Microbacterium sp. UNCCL10
SAMN02745433 • SRS710592 • All experiments • All runs
Library:
Name: TZGU
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
forward151  reverse

Runs: 1 run, 4.4M spots, 1.3G bases, 762.9Mb
Run# of Spots# of BasesSizePublished
SRR15877814,412,8201.3G762.9Mb2014-09-27

ID:
1003248

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