Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473530: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322740' containing sample 'TKK_04_0113' from individual 'NL_113'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.8M spots, 559.6M bases, 209.8Mb downloads

UUID: c388f47c-4c99-411d-b99f-964e2aedb0f5

Design: Illumina sequencing of Mycobacterium tuberculosis TKK_04_0113 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - KRITH 2

PRJNA235581 • SRP038520 • All experiments • All runs

Sample:

SAMN02586071 • SRS559824 • All experiments • All runs

Organism: Mycobacterium tuberculosis TKK_04_0113

Library:

Name: Pond-322740

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485244.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5VN

material_type: DNA:DNA Somatic

product_order: PDO-2815

product_part_number: P-WG-0033

project: G58249

research_project: RP-114

root_sample_id: SM-4Q75P

sample_id: SM-5G5VN

work_request: 39964

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:40:42.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.8M spots, 559.6M bases, 209.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1173038	1,394,694	281.7M	105.4Mb	2014-02-20
SRR1175354	1,375,596	277.9M	104.4Mb	2014-02-24

ID:: 654020

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Sequence Read Archive

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