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SRX5094073: RNA-Seq of Hordeum spontaneum: Sede Boqer, sample 5-3, 1980
1 ILLUMINA (Illumina HiSeq 2500) run: 50,918 spots, 12.8M bases, 4.8Mb downloads

Design: RNA: Qiagen RNEasy Plant Mini, Library: Lexogen SENSE mRNA-Seq v2, Seq: Single HiSeq lane with SBS v4 2x125 bases
Submitted by: Agriculture & Agri-Food Canada
Study: Hordeum spontaneum Genome Sequencing Using RNA Seq
PRJNA507455 • SRP172445 • All experiments • All runs
show Abstracthide Abstract
Ten populations of wild barley (Hordeum spontaneum) were collected 28 years apart. Single nucleotide polymorphisms (SNPs) were detected using RNA Seq sequences. Focus was placed on those SNPs that were deleterious and associated with the two sample times to examine the change in diversity over time.
Sample: The tissue originated from seed that was increased once from seed collected either in 1980 or 2008.
SAMN10500146 • SRS4105683 • All experiments • All runs
Organism: Hordeum vulgare subsp. spontaneum
Library:
Name: B05-3_S18
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: PolyA
Layout: PAIRED
Runs: 1 run, 50,918 spots, 12.8M bases, 4.8Mb
Run# of Spots# of BasesSizePublished
SRR827923050,91812.8M4.8Mb2019-12-01

ID:
6870535

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