RNA-seq of Hordeum vulgare: germinating seed 16h plumule replicate 1 - SRA

SRX4883006: RNA-seq of Hordeum vulgare: germinating seed 16h plumule replicate 1
1 ILLUMINA (NextSeq 500) run: 30.7M spots, 2.3G bases, 940.7Mb downloads

Design: RNA-seq library synthesis using the TruSeq Stranded Total RNA with Ribo-Zero Plant kit. RNA-seq libraries were pooled and sequenced on a Illumina Nextseq500 platform (Illumina).

Submitted by: La Trobe University

Study: Barley seed germination

PRJNA496380 • SRP165710 • All experiments • All runs

show Abstracthide Abstract

To investigate cell-type specific genome regulation during germination, we have applied laser-capture microdissection RNA sequencing to three tissues of barley seeds that have distinct functions (plumules, radicles and scutellum).

Sample: 16P1

SAMN10240104 • SRS3931813 • All experiments • All runs

Organism: Hordeum vulgare

Library:

Name: 16P1

Instrument: NextSeq 500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Runs: 1 run, 30.7M spots, 2.3G bases, 940.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR8053451	30,650,820	2.3G	940.7Mb	2019-11-01

ID:: 6583445

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