RNA-seq of Hordeum vulgare: dry seed 0h radicle replicate 3 - SRA

SRX4883053: RNA-seq of Hordeum vulgare: dry seed 0h radicle replicate 3
1 ILLUMINA (NextSeq 500) run: 18.2M spots, 1.4G bases, 582.2Mb downloads

Design: RNA-seq library synthesis using the TruSeq Stranded Total RNA with Ribo-Zero Plant kit. RNA-seq libraries were pooled and sequenced on a Illumina Nextseq500 platform (Illumina).

Submitted by: La Trobe University

Study: Barley seed germination

PRJNA496380 • SRP165710 • All experiments • All runs

show Abstracthide Abstract

To investigate cell-type specific genome regulation during germination, we have applied laser-capture microdissection RNA sequencing to three tissues of barley seeds that have distinct functions (plumules, radicles and scutellum).

Sample: 0R3

SAMN10240094 • SRS3931860 • All experiments • All runs

Organism: Hordeum vulgare

Library:

Name: 0R3

Instrument: NextSeq 500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Runs: 1 run, 18.2M spots, 1.4G bases, 582.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR8053404	18,195,490	1.4G	582.2Mb	2019-11-01

ID:: 6583492

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity