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SRX244301: GSM1087255: wild-type, total mRNA; Danio rerio; RNA-Seq
1 ILLUMINA (Illumina Genome Analyzer IIx) run: 39.8M spots, 1.4G bases, 808.2Mb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: The Translation Initiation Factor eIF3h Targets Specific Transcripts to Polysomes during Embryogenesis
show Abstracthide Abstract
We have sequenced the polysome-associated translating mRNAs from stage-matched wild-type and eif3ha morphant embryos at ~24 hpf stage to identify transcripts translationally regulated by eIF3ha. As a control, we have also sequenced total mRNAs from the stage-matched wild-type and eif3ha morphants as well at ~ 24 hpf. Overall design: Polysome-associated mRNAs were isolated from 300 zebrafish embryos. Total RNA was isolated from 50 zebrafish embryos. Single 36-base pair reads were sequenced on the Illumina Genome Analyzer Iix.
Sample: wild-type, total mRNA
SAMN01924421 • SRS397562 • All experiments • All runs
Organism: Danio rerio
Library:
Instrument: Illumina Genome Analyzer IIx
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Experiment attributes:
GEO Accession: GSM1087255
Links:
External link:
Runs: 1 run, 39.8M spots, 1.4G bases, 808.2Mb
Run# of Spots# of BasesSizePublished
SRR74951439,815,8101.4G808.2Mb2015-07-22

ID:
335296

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