GSM1076994: Gata6 morphant, 6-somites, rep 1; Danio rerio; RNA-Seq - SRA

SRX222289: GSM1076994: Gata6 morphant, 6-somites, rep 1; Danio rerio; RNA-Seq
1 ILLUMINA (Illumina Genome Analyzer IIx) run: 39.5M spots, 1.4G bases, 858.5Mb downloads

Submitted by: Gene Expression Omnibus (GEO)

Study: Tmem88a Mediates GATA-dependent Specification of Cardiomyocyte Progenitors by Restricting Canonical WNT Signaling

PRJNA188349 • SRP018379 • All experiments • All runs

show Abstracthide Abstract

We sequenced mRNA from zebrafish wild-type embryos, gata5 morphants, gata6 morphants, and gata5/6 morphants at bud and 6-somite developmental stages to identify genes co-operatively regulated by gata5 and gata6 during cardiomyocyte progenitor specification. Overall design: Samples were collected in duplicate, with 40 embryos per sample. Single 36-base pair reads were sequenced on the Illumina Genome Analyzer IIx

Sample: Gata6 morphant, 6-somites, rep 1

SAMN01909136 • SRS389579 • All experiments • All runs

Organism: Danio rerio

Library:

Instrument: Illumina Genome Analyzer IIx

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Experiment attributes:

GEO Accession: GSM1076994

Links:

External link: GEO Sample

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 39.5M spots, 1.4G bases, 858.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR658545	39,457,158	1.4G	858.5Mb	2015-07-22

ID:: 310055

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity