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SRX220491: GSM1072476: Long days WT, ZT10, rep 1; Arabidopsis thaliana; RNA-Seq
1 ILLUMINA (Illumina Genome Analyzer IIx) run: 11.2M spots, 1.1G bases, 713.2Mb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: Genome-wide analysis of LINK1 and LINK2 effects on the Arabidopsis transcriptome
show Abstracthide Abstract
The goal of this study was to compare the transcriptional profile (RNA-seq) of wild type plants with that of link1link2 double mutants grown under continous light or long day (16h light/8 h darkness) conditions. Overall design: In the first experiment wild-type and link1link2 mutant plants were grown for two weeks under continuous white light conditions at 22 degrees centigrades and the transcriptional profile of these plants was analyzed using RNA-seq. In the second experiment, wild-type and link1link2 mutants were grown under long day conditions (16 h light/8 h darkness), and the transcriptional profile of these plants was analyzed in samples harvested every 4 hours over a 24 hour, starting 2 hourse after the onset of the light period.
Sample: Long days WT, ZT10, rep 1
SAMN01907039 • SRS388029 • All experiments • All runs
Instrument: Illumina Genome Analyzer IIx
Strategy: RNA-Seq
Selection: cDNA
Layout: SINGLE
Experiment attributes:
GEO Accession: GSM1072476
External link:
Runs: 1 run, 11.2M spots, 1.1G bases, 713.2Mb
Run# of Spots# of BasesSizePublished


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