RNA-Seq of Hordeum vulgare L.,cv. Morex: cadmium treatment control pl... - SRA

SRX2740785: RNA-Seq of Hordeum vulgare L.,cv. Morex: cadmium treatment control plant roots replicate 1
1 ILLUMINA (Illumina HiSeq 2000) run: 16.6M spots, 1.7G bases, 1.1Gb downloads

Design: RNA samples of 2 μg was provided to Genomics Core Facility Center (EMBL Heidelberg) for construction of cDNA libraries with poly(A)+ selection and sequencing. Sequencing libraries were prepared using a TruSeq RNA Sample preparation Kit v2 (Illumina, San Diego, CA, USA), according to manufacturer's protocol. Libraries were sequenced on an Illumina HiSeq 2000, producing 2x 50-nucleotide paired-end reads.

Submitted by: Centre of Plant Structural and Functional Genomics

Study: Transcriptome of barley under three different heavy metal stress conditions.

PRJNA382490 • SRP104085 • All experiments • All runs

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The aim of the study is to identify gene regulated by three heavy metal: copper, zinc and cadmium.

Sample: cadmium treatment control sample root 01

SAMN06718709 • SRS2127470 • All experiments • All runs

Organism: Hordeum vulgare

Library:

Name: 0Cd01R

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 16.6M spots, 1.7G bases, 1.1Gb

Run	# of Spots	# of Bases	Size	Published
SRR5452107	16,602,940	1.7G	1.1Gb	2017-05-24

ID:: 3949441

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