Human metagenomic next-generation sequencing - SRA

SRX18162393: Human metagenomic next-generation sequencing
1 ILLUMINA (NextSeq 500) run: 2.5M spots, 387.2M bases, 167.7Mb downloads

Design: Oligo-dT

Submitted by: Heze Municipal Hospital

Study: Bronchoalveolar Lavage Fluid Metagenomic Next-Generation Sequencing in non-severe and severe Pneumonia

PRJNA897106 • SRP406166 • All experiments • All runs

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The aim of this study is to investigate the clinical usefulness of metagenomic Next-generation sequencing (mNGS) on bronchoalveolar lavage fluid (BALF) samples to discriminate non-severe pneumonia and severe pneumonia. We investigate the performance of mNGS on BALF samples from 100 pneumonia suspects, in comparison with conventional microbiological testing of BALF samples and final clinical diagnosis.

Sample:

SAMN31578063 • SRS15660969 • All experiments • All runs

Organism: human lung metagenome

Library:

Name: S81

Instrument: NextSeq 500

Strategy: WGS

Source: METAGENOMIC

Selection: cDNA

Layout: PAIRED

Runs: 1 run, 2.5M spots, 387.2M bases, 167.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR22183690	2,547,508	387.2M	167.7Mb	2022-11-03

ID:: 25144752

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