Trypanosoma cruzi Ikiakarora strain (TcIII) draft genome - SRA

SRX7846941: Trypanosoma cruzi Ikiakarora strain (TcIII) draft genome
1 ION_TORRENT (Ion Torrent PGM) run: 726,941 spots, 182.4M bases, 132.3Mb downloads

Design: Oneg of gDNA was used for automatic library construction in the AB Library Builder system using the Ion XpressTM Plus Fragmet Library Kit (Thermo Fisher); library size selection was performed by using the E-Gel system and SizeSelect 2% Agarose Gels (Thermo Fisher). Library size was confirmed by the Bioanalyzer 2100 system using a high-sensitivity DNA Kit (Agilent Technologies, Santa Clara, CA) and DNA concentration was determined by the Quant-IT dsDNA assay kit and the Qubit Fluorometer system (Invitrogen, Carlsbab, CA).

Submitted by: National Research Council

Study: Trypanosoma cruzi strain:Ikiakarora Genome sequencing and assembly

PRJNA595095 • SRP251504 • All experiments • All runs

show Abstracthide Abstract

Trypanosoma cruzi is a protozoan parasite that causes Chagas disease, one of the biggest public health problems. Here, the draft genome of T. cruzi Ikiakarora strain (TcIII), which has been related with sylvatic cycle, is reported

Sample:

SAMN13546110 • SRS6252590 • All experiments • All runs

Organism: Trypanosoma cruzi

Library:

Name: SAMN13546110.1

Instrument: Ion Torrent PGM

Strategy: WGS

Source: GENOMIC

Selection: PCR

Layout: SINGLE

Runs: 1 run, 726,941 spots, 182.4M bases, 132.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR11235103	726,941	182.4M	132.3Mb	2020-03-04

ID:: 10264969

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