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SRX387598: GSM1280516: kctd10 mut zebrafish heart; Danio rerio; RNA-Seq
2 ILLUMINA (Illumina HiSeq 2000) runs: 204.3M spots, 10.2G bases, 9.7Gb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: Expression profiling in the heart of wild-type and kctd10 mutant zebrafish larvae
show Abstracthide Abstract
We sequenced mRNA of hearts from 50 wild-type and 50 kctd10 mutant embryos at 48 hpf. Overall design: Examination of mRNA levels in the larvae hearts between the the wt and the kctd10 mutant.
Sample: kctd10 mut zebrafish heart
SAMN02437283 • SRS511498 • All experiments • All runs
Organism: Danio rerio
Library:
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Total RNAs from wild-type and kctd10 mutant fish hearts were isolated with RNeasy Mini Kit (Qiagen), purified with RNeasy columns (QIAGEN). Next generation sequencing libraries were prepared with the Illumina TruSeq preparation kit (Illumina) according to manufacturer's protocol
Experiment attributes:
GEO Accession: GSM1280516
Links:
External link:
Runs: 2 runs, 204.3M spots, 10.2G bases, 9.7Gb
Run# of Spots# of BasesSizePublished
SRR1104059201,071,80310.1G9.5Gb2014-01-07
SRR10436883,183,235159.2M138.8Mb2013-12-09

ID:
557158

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