GSM1254778: eomesafh105_sphere_rep1; Danio rerio; RNA-Seq - SRA

SRX370994: GSM1254778: eomesafh105_sphere_rep1; Danio rerio; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2000) run: 77M spots, 7.7G bases, 5Gb downloads

Submitted by: Gene Expression Omnibus (GEO)

Study: Identification of genes differentially expressed in MZeomesa embryos compared with wild-type

PRJNA225691 • SRP032374 • All experiments • All runs

show Abstracthide Abstract

Study of Smad2 and Eomesa genomic binding in zebrafish blastulas, their relationship to eachother and the relaptionship between genomic binding and Ndr1 and Eomesa responsive genes as identified by microarray and RNA-seq. Overall design: Replicate RNA samples from wild-type and MZeomesa sphere stage embryos

Sample: eomesafh105_sphere_rep1

SAMN02389004 • SRS496508 • All experiments • All runs

Organism: Danio rerio

Library:

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Construction protocol: Total RNA was extracted using Trizol according to manufacturers protocol and treated with Ambion TURBO Dnase. RNA libraries were prepared for sequencing using standard Illumina protocols

Experiment attributes:

GEO Accession: GSM1254778

Links:

External link: GEO Sample GSM1254778

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 77M spots, 7.7G bases, 5Gb

Run	# of Spots	# of Bases	Size	Published
SRR1021215	76,950,856	7.7G	5Gb	2014-10-15

ID:: 530865

SRA

Sequence Read Archive

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