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Embryo hypermethylation in Brassica rapa - BioProject

Brassica rapa mature embryos show CHH hypermethylation, and functional RdDM in the maternal sporophyte cannot restore wild-type levels of methylation in RdDM mutant embryos. Sequencing data are from dissected mature embryos in the Brassica rapa...

Raw sequence reads project

Accession: PRJNA657007

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Items: 17

1.

R-o-18_WT_early_embryo_rep_2

1 ILLUMINA (NextSeq 500) run: 37.2M spots, 5.6G bases, 2.1Gb downloads

Accession:
SRX8941595
2.

R-o-18_WT_early_embryo_rep_1

1 ILLUMINA (NextSeq 500) run: 37.1M spots, 5.6G bases, 2.1Gb downloads

Accession:
SRX8941594
3.

R-o-18_WT_mature_embryo_rep_2

1 ILLUMINA (NextSeq 500) run: 40.4M spots, 6.1G bases, 2.4Gb downloads

Accession:
SRX8941593
4.

R-o-18_WT_mature_embryo_rep_1

1 ILLUMINA (NextSeq 500) run: 48.5M spots, 7.3G bases, 2.8Gb downloads

Accession:
SRX8941592
5.

rdr2_mutant_from_rdr2_heterozygous_mother_mature_embryo_rep_3

1 ILLUMINA (NextSeq 500) run: 45.1M spots, 6.8G bases, 2.6Gb downloads

Accession:
SRX8941591
6.

rdr2_mutant_from_rdr2_heterozygous_mother_mature_embryo_rep_2

1 ILLUMINA (NextSeq 500) run: 45.7M spots, 6.9G bases, 2.7Gb downloads

Accession:
SRX8941590
7.

rdr2_mutant_from_rdr2_heterozygous_mother_mature_embryo_rep_1

1 ILLUMINA (NextSeq 500) run: 48.6M spots, 7.3G bases, 2.8Gb downloads

Accession:
SRX8941589
8.

rdr2_mutant_from_rdr2_homozygous_mother_mature_embryo_rep_3

1 ILLUMINA (NextSeq 500) run: 44.4M spots, 6.7G bases, 2.6Gb downloads

Accession:
SRX8941588
9.

R-o-18_WT_seedcoat_rep_3

1 ILLUMINA (NextSeq 500) run: 40.7M spots, 6.1G bases, 2.3Gb downloads

Accession:
SRX8941587
10.

R-o-18_WT_seedcoat_rep_2

1 ILLUMINA (NextSeq 500) run: 38.5M spots, 5.8G bases, 2.1Gb downloads

Accession:
SRX8941586
11.

R-o-18_WT_seedcoat_rep_1

1 ILLUMINA (NextSeq 500) run: 37.8M spots, 5.7G bases, 2.1Gb downloads

Accession:
SRX8941585
12.

R-o-18_WT_endosperm_rep_3

1 ILLUMINA (NextSeq 500) run: 42.8M spots, 6.5G bases, 2.4Gb downloads

Accession:
SRX8941584
13.

R-o-18_WT_endosperm_rep_2

1 ILLUMINA (NextSeq 500) run: 40.1M spots, 6G bases, 2.2Gb downloads

Accession:
SRX8941583
14.

R-o-18_WT_endosperm_rep_1

1 ILLUMINA (NextSeq 500) run: 37.7M spots, 5.7G bases, 2.1Gb downloads

Accession:
SRX8941582
15.

R-o-18_WT_early_embryo_rep_3

1 ILLUMINA (NextSeq 500) run: 39.1M spots, 5.9G bases, 2.2Gb downloads

Accession:
SRX8941581
16.

rdr2_mutant_from_rdr2_homozygous_mother_mature_embryo_rep_2

1 ILLUMINA (NextSeq 500) run: 43M spots, 6.5G bases, 2.5Gb downloads

Accession:
SRX8941580
17.

rdr2_mutant_from_rdr2_homozygous_mother_mature_embryo_rep_1

1 ILLUMINA (NextSeq 500) run: 42.2M spots, 6.4G bases, 2.5Gb downloads

Accession:
SRX8941579
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