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ERX1999208: Illumina HiSeq 2500 sequencing; Histone H3K9me3 ChIP-seq of young adult C. elegans wildtype, and mutants emb-4 (qm31) and hrde-1 (tm1200)
1 ILLUMINA (Illumina HiSeq 2500) run: 454,553 spots, 23M bases, 9.2Mb downloads

Design: Histone H3K9me3 ChIP-seq of young adult C. elegans wildtype, and mutants emb-4 (qm31) and hrde-1 (tm1200)
Submitted by: Wellcome Trust/Cancer Research UK Gurdon Institute Department of Genetics, University of Cambridge Wellcome Trust Sanger Institute (Wellcome Trust/Cancer Research UK Gurdon Institute)
Study: Histone H3K9me3 ChIP-seq of young adult C. elegans wildtype, and mutants emb-4 (qm31) and hrde-1 (tm1200)
show Abstracthide Abstract
This data set was generated to study the silencing of transposable elements by the histone H3K9me3 mark and its relevance for the nuclear RNAi pathway.
Sample: E-MTAB-5662:SX2000-input-3
SAMEA103982080 • ERS1671248 • All experiments • All runs
Library:
Name: SX2000-input-3_s
Instrument: Illumina HiSeq 2500
Strategy: ChIP-Seq
Source: GENOMIC
Selection: ChIP
Layout: SINGLE
Construction protocol: Strains were cultured using standard methods (Brenner, 1974) The experiment was carried out according to Schmidl et al. 2015, Nature. Library preparation was performed using the Illumina Nextera DNA prep kit.
Experiment attributes:
Experimental Factor: immunoprecipitate: input DNA
Runs: 1 run, 454,553 spots, 23M bases, 9.2Mb
Run# of Spots# of BasesSizePublished
ERR1938675454,55323M9.2Mb2017-07-01

ID:
4241213

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