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ERX2530313: Illumina HiSeq 2000 sequencing
1 ILLUMINA (Illumina HiSeq 2000) run: 8M spots, 797.8M bases, 335.8Mb downloads

Submitted by: MAX PLANCK INSTITUTE (Max Planck Institute)
Study: Transcriptome analysis on mature, non aged seeds of the spring barley landraces Cebada Capa and L94 and L94 NILs by RNA sequencing.
show Abstracthide Abstract
Widespread natural variation in barley offers an opportunity to study seed longevity in an important temperate cereal crop. For example, the spring barley landraces Cebada Capa (Argentina) and L94 (Ethiopia) display long and short-term seed longevity, respectively. We have used this contrast to identify and characterize seed longevity genes in barley by RNA sequencing analysis of mature, non aged seeds of Near Isogenic Lines (NILs) with a L94 background but harboring introgressions from Cebada Capa in four putative QTLs on chromosomes 1H and 2H.
Sample: RNA-Seq of embryo samples of mature, non-aged seeds
SAMEA1103161 • ERS2395203 • All experiments • All runs
Name: unspecified
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Selection: cDNA
Layout: SINGLE
Runs: 1 run, 8M spots, 797.8M bases, 335.8Mb
Run# of Spots# of BasesSizePublished


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