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dbSNP Short Genetic Variations

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs9894429

Current Build 153

Released July 9, 2019

Organism
Homo sapiens
Position
chr17:81629785 (GRCh38.p12) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
C>A / C>T
Variation Type
SNV Single Nucleotide Variation
Frequency
C=0.41479 (52084/125568, TOPMED)
C=0.44497 (53732/120754, ExAC)
C=0.4411 (13823/31336, GnomAD) (+ 6 more)
C=0.4422 (5471/12372, GO-ESP)
C=0.326 (1632/5008, 1000G)
T=0.461 (2065/4480, Estonian)
T=0.451 (1739/3854, ALSPAC)
T=0.445 (1649/3708, TWINSUK)
T=0.47 (279/600, NorthernSweden)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
NPLOC4 : Synonymous Variant
Publications
1 citation
Genomic View
See rs on genome
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p12 chr 17 NC_000017.11:g.81629785C>A
GRCh38.p12 chr 17 NC_000017.11:g.81629785C>T
GRCh37.p13 chr 17 NC_000017.10:g.79596811C>A
GRCh37.p13 chr 17 NC_000017.10:g.79596811C>T
Gene: NPLOC4, NPL4 homolog, ubiquitin recognition factor (minus strand)
Molecule type Change Amino acid[Codon] SO Term
NPLOC4 transcript variant 1 NM_017921.4:c.36G>T P [CCG] > P [CCT] Coding Sequence Variant
nuclear protein localization protein 4 homolog isoform 1 NP_060391.2:p.Pro12= P (Pro) > P (Pro) Synonymous Variant
NPLOC4 transcript variant 1 NM_017921.4:c.36G>A P [CCG] > P [CCA] Coding Sequence Variant
nuclear protein localization protein 4 homolog isoform 1 NP_060391.2:p.Pro12= P (Pro) > P (Pro) Synonymous Variant
NPLOC4 transcript variant 4 NM_001369698.1:c. N/A Coding Sequence Variant
NPLOC4 transcript variant 2 NR_130139.1:n. N/A Genic Upstream Transcript Variant
NPLOC4 transcript variant 3 NR_130140.2:n. N/A Genic Upstream Transcript Variant
NPLOC4 transcript variant X1 XM_011524979.1:c.36G>T P [CCG] > P [CCT] Coding Sequence Variant
nuclear protein localization protein 4 homolog isoform X1 XP_011523281.1:p.Pro12= P (Pro) > P (Pro) Synonymous Variant
NPLOC4 transcript variant X1 XM_011524979.1:c.36G>A P [CCG] > P [CCA] Coding Sequence Variant
nuclear protein localization protein 4 homolog isoform X1 XP_011523281.1:p.Pro12= P (Pro) > P (Pro) Synonymous Variant
NPLOC4 transcript variant X2 XM_011524980.1:c.36G>T P [CCG] > P [CCT] Coding Sequence Variant
nuclear protein localization protein 4 homolog isoform X2 XP_011523282.1:p.Pro12= P (Pro) > P (Pro) Synonymous Variant
NPLOC4 transcript variant X2 XM_011524980.1:c.36G>A P [CCG] > P [CCA] Coding Sequence Variant
nuclear protein localization protein 4 homolog isoform X2 XP_011523282.1:p.Pro12= P (Pro) > P (Pro) Synonymous Variant
NPLOC4 transcript variant X5 XM_011524982.2:c.36G>T P [CCG] > P [CCT] Coding Sequence Variant
nuclear protein localization protein 4 homolog isoform X4 XP_011523284.1:p.Pro12= P (Pro) > P (Pro) Synonymous Variant
NPLOC4 transcript variant X5 XM_011524982.2:c.36G>A P [CCG] > P [CCA] Coding Sequence Variant
nuclear protein localization protein 4 homolog isoform X4 XP_011523284.1:p.Pro12= P (Pro) > P (Pro) Synonymous Variant
NPLOC4 transcript variant X6 XR_934501.1:n.254G>T N/A Non Coding Transcript Variant
NPLOC4 transcript variant X6 XR_934501.1:n.254G>A N/A Non Coding Transcript Variant
NPLOC4 transcript variant X7 XR_934502.1:n.254G>T N/A Non Coding Transcript Variant
NPLOC4 transcript variant X7 XR_934502.1:n.254G>A N/A Non Coding Transcript Variant
NPLOC4 transcript variant X4 XR_001752557.1:n.254G>T N/A Non Coding Transcript Variant
NPLOC4 transcript variant X4 XR_001752557.1:n.254G>A N/A Non Coding Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 125568 C=0.41479 T=0.58521
ExAC Global Study-wide 120754 C=0.44497 T=0.55503
ExAC Europe Sub 73350 C=0.5463 T=0.4537
ExAC Asian Sub 25126 C=0.3195 T=0.6805
ExAC American Sub 11576 C=0.2433 T=0.7567
ExAC African Sub 9804 C=0.244 T=0.756
ExAC Other Sub 898 C=0.48 T=0.52
gnomAD - Genomes Global Study-wide 31336 C=0.4411 T=0.5589
gnomAD - Genomes European Sub 18864 C=0.5542 T=0.4458
gnomAD - Genomes African Sub 8700 C=0.239 T=0.761
gnomAD - Genomes East Asian Sub 1552 C=0.214 T=0.786
gnomAD - Genomes Other Sub 1086 C=0.496 T=0.504
gnomAD - Genomes American Sub 844 C=0.32 T=0.68
gnomAD - Genomes Ashkenazi Jewish Sub 290 C=0.52 T=0.48
GO Exome Sequencing Project Global Study-wide 12372 C=0.4422 T=0.5578
GO Exome Sequencing Project European American Sub 8356 C=0.538 T=0.462
GO Exome Sequencing Project African American Sub 4016 C=0.243 T=0.757
1000Genomes Global Study-wide 5008 C=0.326 T=0.674
1000Genomes African Sub 1322 C=0.185 T=0.815
1000Genomes East Asian Sub 1008 C=0.223 T=0.777
1000Genomes Europe Sub 1006 C=0.588 T=0.412
1000Genomes South Asian Sub 978 C=0.35 T=0.65
1000Genomes American Sub 694 C=0.32 T=0.68
Genetic variation in the Estonian population Estonian Study-wide 4480 C=0.539 T=0.461
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 C=0.549 T=0.451
UK 10K study - Twins TWIN COHORT Study-wide 3708 C=0.555 T=0.445
Northern Sweden ACPOP Study-wide 600 C=0.54 T=0.47
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement C= A T Note
GRCh38.p12 chr 17 NC_000017.11:g.81...

NC_000017.11:g.81629785=

NC_000017.11:g.81...

NC_000017.11:g.81629785C>A

NC_000017.11:g.81...

NC_000017.11:g.81629785C>T

GRCh37.p13 chr 17 NC_000017.10:g.79...

NC_000017.10:g.79596811=

NC_000017.10:g.79...

NC_000017.10:g.79596811C>A

NC_000017.10:g.79...

NC_000017.10:g.79596811C>T

NPLOC4 transcript variant 1 NM_017921.4:c.36= NM_017921.4:c.36G>T NM_017921.4:c.36G>A
NPLOC4 transcript variant 1 NM_017921.3:c.36= NM_017921.3:c.36G>T NM_017921.3:c.36G>A
NPLOC4 transcript NM_017921.2:c.36= NM_017921.2:c.36G>T NM_017921.2:c.36G>A
NPLOC4 transcript variant X5 XM_011524982.2:c.36= XM_011524982.2:c....

XM_011524982.2:c.36G>T

XM_011524982.2:c....

XM_011524982.2:c.36G>A

NPLOC4 transcript variant X4 XR_001752557.1:n....

XR_001752557.1:n.254=

XR_001752557.1:n....

XR_001752557.1:n.254G>T

XR_001752557.1:n....

XR_001752557.1:n.254G>A

NPLOC4 transcript variant X2 XM_011524980.1:c.36= XM_011524980.1:c....

XM_011524980.1:c.36G>T

XM_011524980.1:c....

XM_011524980.1:c.36G>A

NPLOC4 transcript variant X7 XR_934502.1:n.254= XR_934502.1:n.254G>T XR_934502.1:n.254G>A
NPLOC4 transcript variant X6 XR_934501.1:n.254= XR_934501.1:n.254G>T XR_934501.1:n.254G>A
NPLOC4 transcript variant X1 XM_011524979.1:c.36= XM_011524979.1:c....

XM_011524979.1:c.36G>T

XM_011524979.1:c....

XM_011524979.1:c.36G>A

nuclear protein localization protein 4 homolog isoform 1 NP_060391.2:p.Pro12= NP_060391.2:p.Pro12= NP_060391.2:p.Pro12=
nuclear protein localization protein 4 homolog isoform X4 XP_011523284.1:p....

XP_011523284.1:p.Pro12=

XP_011523284.1:p....

XP_011523284.1:p.Pro12=

XP_011523284.1:p....

XP_011523284.1:p.Pro12=

nuclear protein localization protein 4 homolog isoform X2 XP_011523282.1:p....

XP_011523282.1:p.Pro12=

XP_011523282.1:p....

XP_011523282.1:p.Pro12=

XP_011523282.1:p....

XP_011523282.1:p.Pro12=

nuclear protein localization protein 4 homolog isoform X1 XP_011523281.1:p....

XP_011523281.1:p.Pro12=

XP_011523281.1:p....

XP_011523281.1:p.Pro12=

XP_011523281.1:p....

XP_011523281.1:p.Pro12=

Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

132 SubSNP, 11 Frequency submissions
No Submitter Submission ID Date (Build)
1 BCM_SSAHASNP ss13731937 Dec 05, 2003 (119)
2 CSHL-HAPMAP ss17576865 Feb 27, 2004 (120)
3 SSAHASNP ss21395952 Apr 05, 2004 (121)
4 ABI ss44013793 Mar 15, 2006 (126)
5 ILLUMINA ss65736147 Oct 14, 2006 (127)
6 ILLUMINA ss66822948 Nov 29, 2006 (127)
7 ILLUMINA ss67957369 Nov 29, 2006 (127)
8 ILLUMINA ss68066954 Nov 29, 2006 (127)
9 ILLUMINA ss71631805 May 16, 2007 (127)
10 ILLUMINA ss75833686 Dec 06, 2007 (129)
11 ILLUMINA ss79307420 Dec 15, 2007 (130)
12 HGSV ss82493111 Dec 15, 2007 (130)
13 HGSV ss84789738 Dec 15, 2007 (130)
14 KRIBB_YJKIM ss84869846 Dec 15, 2007 (130)
15 BCMHGSC_JDW ss90679282 Mar 24, 2008 (129)
16 ILLUMINA ss98299347 May 26, 2008 (130)
17 BGI ss106523362 Feb 06, 2009 (130)
18 1000GENOMES ss109992316 Jan 24, 2009 (130)
19 ILLUMINA-UK ss118146630 Feb 14, 2009 (130)
20 ILLUMINA ss123057910 Dec 01, 2009 (131)
21 ENSEMBL ss136493739 Dec 01, 2009 (131)
22 ENSEMBL ss137211987 Dec 01, 2009 (131)
23 ILLUMINA ss154515596 Dec 01, 2009 (131)
24 GMI ss154711854 Dec 01, 2009 (131)
25 ILLUMINA ss159689434 Dec 01, 2009 (131)
26 ILLUMINA ss161021905 Dec 01, 2009 (131)
27 COMPLETE_GENOMICS ss168584412 Jul 04, 2010 (132)
28 ILLUMINA ss172514621 Jul 04, 2010 (132)
29 ILLUMINA ss174920933 Jul 04, 2010 (132)
30 BUSHMAN ss202855469 Jul 04, 2010 (132)
31 BCM-HGSC-SUB ss207949636 Jul 04, 2010 (132)
32 1000GENOMES ss211837887 Jul 14, 2010 (132)
33 1000GENOMES ss227686409 Jul 14, 2010 (132)
34 1000GENOMES ss237343342 Jul 15, 2010 (132)
35 1000GENOMES ss243618734 Jul 15, 2010 (132)
36 GMI ss282863380 May 04, 2012 (137)
37 GMI ss287224695 Apr 25, 2013 (138)
38 PJP ss292004285 May 09, 2011 (134)
39 ILLUMINA ss482008248 May 04, 2012 (137)
40 ILLUMINA ss482042387 May 04, 2012 (137)
41 ILLUMINA ss482993815 Sep 08, 2015 (146)
42 ILLUMINA ss485797677 May 04, 2012 (137)
43 1000GENOMES ss491134678 May 04, 2012 (137)
44 EXOME_CHIP ss491530007 May 04, 2012 (137)
45 CLINSEQ_SNP ss491745976 May 04, 2012 (137)
46 ILLUMINA ss537639770 Sep 08, 2015 (146)
47 TISHKOFF ss565442541 Apr 25, 2013 (138)
48 SSMP ss661259080 Apr 25, 2013 (138)
49 NHLBI-ESP ss713421863 Apr 25, 2013 (138)
50 ILLUMINA ss778650574 Sep 08, 2015 (146)
51 ILLUMINA ss780687654 Sep 08, 2015 (146)
52 ILLUMINA ss783344688 Sep 08, 2015 (146)
53 ILLUMINA ss783361219 Sep 08, 2015 (146)
54 ILLUMINA ss784296047 Sep 08, 2015 (146)
55 ILLUMINA ss825637938 Apr 01, 2015 (144)
56 ILLUMINA ss832606622 Sep 08, 2015 (146)
57 ILLUMINA ss833200099 Jul 13, 2019 (153)
58 ILLUMINA ss834108402 Sep 08, 2015 (146)
59 JMKIDD_LAB ss974501041 Aug 21, 2014 (142)
60 EVA-GONL ss993390864 Aug 21, 2014 (142)
61 JMKIDD_LAB ss1067576763 Aug 21, 2014 (142)
62 JMKIDD_LAB ss1081255117 Aug 21, 2014 (142)
63 1000GENOMES ss1359759010 Aug 21, 2014 (142)
64 DDI ss1428114269 Apr 01, 2015 (144)
65 EVA_GENOME_DK ss1578267927 Apr 01, 2015 (144)
66 EVA_FINRISK ss1584109584 Apr 01, 2015 (144)
67 EVA_UK10K_ALSPAC ss1636216296 Apr 01, 2015 (144)
68 EVA_UK10K_TWINSUK ss1679210329 Apr 01, 2015 (144)
69 EVA_EXAC ss1693034539 Apr 01, 2015 (144)
70 EVA_DECODE ss1697443216 Apr 01, 2015 (144)
71 EVA_MGP ss1711477122 Apr 01, 2015 (144)
72 EVA_SVP ss1713602151 Apr 01, 2015 (144)
73 ILLUMINA ss1752244348 Sep 08, 2015 (146)
74 ILLUMINA ss1752244349 Sep 08, 2015 (146)
75 HAMMER_LAB ss1808906670 Sep 08, 2015 (146)
76 ILLUMINA ss1917924513 Feb 12, 2016 (147)
77 WEILL_CORNELL_DGM ss1936858163 Feb 12, 2016 (147)
78 ILLUMINA ss1946479274 Feb 12, 2016 (147)
79 ILLUMINA ss1959777953 Feb 12, 2016 (147)
80 GENOMED ss1968446287 Jul 19, 2016 (147)
81 JJLAB ss2029200608 Sep 14, 2016 (149)
82 USC_VALOUEV ss2157692113 Dec 20, 2016 (150)
83 HUMAN_LONGEVITY ss2219077433 Dec 20, 2016 (150)
84 TOPMED ss2384317217 Dec 20, 2016 (150)
85 SYSTEMSBIOZJU ss2629096093 Nov 08, 2017 (151)
86 ILLUMINA ss2633433551 Nov 08, 2017 (151)
87 GRF ss2702258764 Nov 08, 2017 (151)
88 GNOMAD ss2743115697 Nov 08, 2017 (151)
89 GNOMAD ss2749899707 Nov 08, 2017 (151)
90 GNOMAD ss2953069172 Nov 08, 2017 (151)
91 AFFY ss2985108666 Nov 08, 2017 (151)
92 AFFY ss2985743873 Nov 08, 2017 (151)
93 SWEGEN ss3015995569 Nov 08, 2017 (151)
94 ILLUMINA ss3021813502 Nov 08, 2017 (151)
95 BIOINF_KMB_FNS_UNIBA ss3028424498 Nov 08, 2017 (151)
96 TOPMED ss3270183609 Nov 08, 2017 (151)
97 CSHL ss3351867947 Nov 08, 2017 (151)
98 ILLUMINA ss3627737904 Oct 12, 2018 (152)
99 ILLUMINA ss3627737905 Oct 12, 2018 (152)
100 ILLUMINA ss3631412181 Oct 12, 2018 (152)
101 ILLUMINA ss3633150849 Oct 12, 2018 (152)
102 ILLUMINA ss3633859122 Oct 12, 2018 (152)
103 ILLUMINA ss3634691173 Oct 12, 2018 (152)
104 ILLUMINA ss3634691174 Oct 12, 2018 (152)
105 ILLUMINA ss3635546664 Oct 12, 2018 (152)
106 ILLUMINA ss3636379444 Oct 12, 2018 (152)
107 ILLUMINA ss3637298233 Oct 12, 2018 (152)
108 ILLUMINA ss3638178306 Oct 12, 2018 (152)
109 ILLUMINA ss3639097153 Oct 12, 2018 (152)
110 ILLUMINA ss3639556175 Oct 12, 2018 (152)
111 ILLUMINA ss3640398483 Oct 12, 2018 (152)
112 ILLUMINA ss3640398484 Oct 12, 2018 (152)
113 ILLUMINA ss3643155337 Oct 12, 2018 (152)
114 ILLUMINA ss3644698332 Oct 12, 2018 (152)
115 OMUKHERJEE_ADBS ss3646518476 Oct 12, 2018 (152)
116 URBANLAB ss3650714536 Oct 12, 2018 (152)
117 ILLUMINA ss3652232215 Oct 12, 2018 (152)
118 ILLUMINA ss3653880809 Oct 12, 2018 (152)
119 EGCUT_WGS ss3682858701 Jul 13, 2019 (153)
120 EVA_DECODE ss3701029901 Jul 13, 2019 (153)
121 ILLUMINA ss3725650430 Jul 13, 2019 (153)
122 ACPOP ss3742266043 Jul 13, 2019 (153)
123 ILLUMINA ss3744451101 Jul 13, 2019 (153)
124 ILLUMINA ss3744991388 Jul 13, 2019 (153)
125 ILLUMINA ss3744991389 Jul 13, 2019 (153)
126 EVA ss3755003644 Jul 13, 2019 (153)
127 ILLUMINA ss3772488997 Jul 13, 2019 (153)
128 ILLUMINA ss3772488998 Jul 13, 2019 (153)
129 PACBIO ss3788283440 Jul 13, 2019 (153)
130 PACBIO ss3793226857 Jul 13, 2019 (153)
131 PACBIO ss3798113022 Jul 13, 2019 (153)
132 KHV_HUMAN_GENOMES ss3820266144 Jul 13, 2019 (153)
133 1000Genomes NC_000017.10 - 79596811 Oct 12, 2018 (152)
134 The Avon Longitudinal Study of Parents and Children NC_000017.10 - 79596811 Oct 12, 2018 (152)
135 Genetic variation in the Estonian population NC_000017.10 - 79596811 Oct 12, 2018 (152)
136 ExAC NC_000017.10 - 79596811 Oct 12, 2018 (152)
137 gnomAD - Genomes NC_000017.10 - 79596811 Jul 13, 2019 (153)
138 gnomAD - Exomes

Submission ignored due to conflicting rows:
Row 12424603 (NC_000017.10:79596810:C:C 249137/249138, NC_000017.10:79596810:C:A 1/249138)
Row 12424604 (NC_000017.10:79596810:C:C 110297/249138, NC_000017.10:79596810:C:T 138841/249138)

- Jul 13, 2019 (153)
139 gnomAD - Exomes

Submission ignored due to conflicting rows:
Row 12424603 (NC_000017.10:79596810:C:C 249137/249138, NC_000017.10:79596810:C:A 1/249138)
Row 12424604 (NC_000017.10:79596810:C:C 110297/249138, NC_000017.10:79596810:C:T 138841/249138)

- Jul 13, 2019 (153)
140 GO Exome Sequencing Project NC_000017.10 - 79596811 Oct 12, 2018 (152)
141 Northern Sweden NC_000017.10 - 79596811 Jul 13, 2019 (153)
142 TopMed NC_000017.11 - 81629785 Oct 12, 2018 (152)
143 UK 10K study - Twins NC_000017.10 - 79596811 Oct 12, 2018 (152)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs60837126 May 26, 2008 (130)
Added to this RefSNP Cluster:
Submission ids Observation SPDI Canonical SPDI Source RSIDs
ss2743115697 NC_000017.10:79596810:C:A NC_000017.11:81629784:C:A (self)
ss82493111, ss84789738, ss90679282, ss109992316, ss118146630, ss168584412, ss202855469, ss207949636, ss211837887, ss282863380, ss287224695, ss292004285, ss482008248, ss491745976, ss825637938, ss1697443216, ss1713602151, ss3639097153, ss3639556175, ss3643155337 NC_000017.9:77207215:C:T NC_000017.11:81629784:C:T (self)
73043082, 40474008, 28596949, 3497031, 199369636, 1625505, 15550908, 40474008, ss227686409, ss237343342, ss243618734, ss482042387, ss482993815, ss485797677, ss491134678, ss491530007, ss537639770, ss565442541, ss661259080, ss713421863, ss778650574, ss780687654, ss783344688, ss783361219, ss784296047, ss832606622, ss833200099, ss834108402, ss974501041, ss993390864, ss1067576763, ss1081255117, ss1359759010, ss1428114269, ss1578267927, ss1584109584, ss1636216296, ss1679210329, ss1693034539, ss1711477122, ss1752244348, ss1752244349, ss1808906670, ss1917924513, ss1936858163, ss1946479274, ss1959777953, ss1968446287, ss2029200608, ss2157692113, ss2384317217, ss2629096093, ss2633433551, ss2702258764, ss2743115697, ss2749899707, ss2953069172, ss2985108666, ss2985743873, ss3015995569, ss3021813502, ss3351867947, ss3627737904, ss3627737905, ss3631412181, ss3633150849, ss3633859122, ss3634691173, ss3634691174, ss3635546664, ss3636379444, ss3637298233, ss3638178306, ss3640398483, ss3640398484, ss3644698332, ss3646518476, ss3652232215, ss3653880809, ss3682858701, ss3742266043, ss3744451101, ss3744991388, ss3744991389, ss3755003644, ss3772488997, ss3772488998, ss3788283440, ss3793226857, ss3798113022 NC_000017.10:79596810:C:T NC_000017.11:81629784:C:T (self)
162952800, ss2219077433, ss3028424498, ss3270183609, ss3650714536, ss3701029901, ss3725650430, ss3820266144 NC_000017.11:81629784:C:T NC_000017.11:81629784:C:T (self)
ss44013793, ss65736147, ss66822948, ss67957369, ss68066954, ss71631805, ss75833686, ss79307420, ss84869846, ss98299347, ss106523362, ss123057910, ss136493739, ss137211987, ss154515596, ss154711854, ss159689434, ss161021905, ss172514621, ss174920933 NT_010783.15:44870962:C:T NC_000017.11:81629784:C:T (self)
ss13731937, ss17576865, ss21395952 NT_024871.11:1996159:C:T NC_000017.11:81629784:C:T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs9894429
PMID Title Author Year Journal
20463881 Digital quantification of human eye color highlights genetic association of three new loci. Liu F et al. 2010 PLoS genetics

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post104+4a6ee9c