Skip to main page content
Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs9561778

Current Build 155

Released April 9, 2021

Organism
Homo sapiens
Position
chr13:95061461 (GRCh38.p13) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
G>A / G>C / G>T
Variation Type
SNV Single Nucleotide Variation
Frequency
T=0.171283 (45337/264690, TOPMED)
T=0.178682 (30579/171136, ALFA)
T=0.19183 (3215/16760, 8.3KJPN) (+ 14 more)
T=0.1633 (818/5008, 1000G)
T=0.1938 (868/4480, Estonian)
T=0.2321 (680/2930, KOREAN)
T=0.1833 (382/2084, HGDP_Stanford)
T=0.1668 (315/1888, HapMap)
T=0.2325 (426/1832, Korea1K)
T=0.199 (199/998, GoNL)
T=0.187 (112/600, NorthernSweden)
T=0.074 (16/216, Qatari)
T=0.274 (58/212, Vietnamese)
G=0.408 (71/174, SGDP_PRJ)
T=0.10 (8/84, Ancient Sardinia)
T=0.30 (12/40, GENOME_DK)
G=0.38 (10/26, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
ABCC4 : Intron Variant
Publications
7 citations
Genomic View
See rs on genome
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p13 chr 13 NC_000013.11:g.95061461G>A
GRCh38.p13 chr 13 NC_000013.11:g.95061461G>C
GRCh38.p13 chr 13 NC_000013.11:g.95061461G>T
GRCh37.p13 chr 13 NC_000013.10:g.95713715G>A
GRCh37.p13 chr 13 NC_000013.10:g.95713715G>C
GRCh37.p13 chr 13 NC_000013.10:g.95713715G>T
ABCC4 RefSeqGene (LRG_1183) NG_050651.2:g.244986C>T
ABCC4 RefSeqGene (LRG_1183) NG_050651.2:g.244986C>G
ABCC4 RefSeqGene (LRG_1183) NG_050651.2:g.244986C>A
ABCC4 RefSeqGene NG_050651.1:g.244986C>T
ABCC4 RefSeqGene NG_050651.1:g.244986C>G
ABCC4 RefSeqGene NG_050651.1:g.244986C>A
Gene: ABCC4, ATP binding cassette subfamily C member 4 (minus strand)
Molecule type Change Amino acid[Codon] SO Term
ABCC4 transcript variant 3 NM_001301829.2:c.3225+124…

NM_001301829.2:c.3225+1243C>T

N/A Intron Variant
ABCC4 transcript variant 1 NM_005845.5:c.3366+1243C>T N/A Intron Variant
ABCC4 transcript variant 2 NM_001105515.3:c. N/A Genic Downstream Transcript Variant
ABCC4 transcript variant 4 NM_001301830.2:c. N/A Genic Downstream Transcript Variant
ABCC4 transcript variant X2 XM_005254025.2:c.3237+124…

XM_005254025.2:c.3237+1243C>T

N/A Intron Variant
ABCC4 transcript variant X1 XM_017020319.1:c.3237+124…

XM_017020319.1:c.3237+1243C>T

N/A Intron Variant
ABCC4 transcript variant X4 XM_017020321.1:c.1851+124…

XM_017020321.1:c.1851+1243C>T

N/A Intron Variant
ABCC4 transcript variant X3 XM_017020320.2:c. N/A Genic Downstream Transcript Variant
ABCC4 transcript variant X5 XM_017020322.1:c. N/A Genic Downstream Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20201027095038
Population Group Sample Size Ref Allele Alt Allele
Total Global 171136 G=0.821318 A=0.000000, T=0.178682
European Sub 148222 G=0.812079 A=0.000000, T=0.187921
African Sub 8526 G=0.8932 A=0.0000, T=0.1068
African Others Sub 294 G=0.908 A=0.000, T=0.092
African American Sub 8232 G=0.8926 A=0.0000, T=0.1074
Asian Sub 634 G=0.752 A=0.000, T=0.248
East Asian Sub 508 G=0.754 A=0.000, T=0.246
Other Asian Sub 126 G=0.746 A=0.000, T=0.254
Latin American 1 Sub 718 G=0.861 A=0.000, T=0.139
Latin American 2 Sub 6224 G=0.9328 A=0.0000, T=0.0672
South Asian Sub 156 G=0.904 A=0.000, T=0.096
Other Sub 6656 G=0.8311 A=0.0000, T=0.1689


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 G=0.828717 T=0.171283
8.3KJPN JAPANESE Study-wide 16760 G=0.80817 T=0.19183
1000Genomes Global Study-wide 5008 G=0.8353 A=0.0014, T=0.1633
1000Genomes African Sub 1322 G=0.8828 A=0.0045, T=0.1127
1000Genomes East Asian Sub 1008 G=0.7312 A=0.0000, T=0.2688
1000Genomes Europe Sub 1006 G=0.8280 A=0.0000, T=0.1720
1000Genomes South Asian Sub 978 G=0.845 A=0.000, T=0.155
1000Genomes American Sub 694 G=0.893 A=0.001, T=0.105
Genetic variation in the Estonian population Estonian Study-wide 4480 G=0.8063 T=0.1938
KOREAN population from KRGDB KOREAN Study-wide 2930 G=0.7679 C=0.0000, T=0.2321
HGDP-CEPH-db Supplement 1 Global Study-wide 2084 G=0.8167 T=0.1833
HGDP-CEPH-db Supplement 1 Est_Asia Sub 470 G=0.740 T=0.260
HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 G=0.850 T=0.150
HGDP-CEPH-db Supplement 1 Middle_Est Sub 350 G=0.897 T=0.103
HGDP-CEPH-db Supplement 1 Europe Sub 320 G=0.809 T=0.191
HGDP-CEPH-db Supplement 1 Africa Sub 242 G=0.752 T=0.248
HGDP-CEPH-db Supplement 1 America Sub 216 G=0.991 T=0.009
HGDP-CEPH-db Supplement 1 Oceania Sub 72 G=0.46 T=0.54
HapMap Global Study-wide 1888 G=0.8332 T=0.1668
HapMap American Sub 768 G=0.815 T=0.185
HapMap African Sub 690 G=0.875 T=0.125
HapMap Asian Sub 254 G=0.768 T=0.232
HapMap Europe Sub 176 G=0.841 T=0.159
Korean Genome Project KOREAN Study-wide 1832 G=0.7675 T=0.2325
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 G=0.801 T=0.199
Northern Sweden ACPOP Study-wide 600 G=0.813 T=0.187
Qatari Global Study-wide 216 G=0.926 T=0.074
A Vietnamese Genetic Variation Database Global Study-wide 212 G=0.726 T=0.274
SGDP_PRJ Global Study-wide 174 G=0.408 T=0.592
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 84 G=0.90 T=0.10
The Danish reference pan genome Danish Study-wide 40 G=0.70 T=0.30
Siberian Global Study-wide 26 G=0.38 T=0.62
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement G= A C T
GRCh38.p13 chr 13 NC_000013.11:g.95061461= NC_000013.11:g.95061461G>A NC_000013.11:g.95061461G>C NC_000013.11:g.95061461G>T
GRCh37.p13 chr 13 NC_000013.10:g.95713715= NC_000013.10:g.95713715G>A NC_000013.10:g.95713715G>C NC_000013.10:g.95713715G>T
ABCC4 RefSeqGene (LRG_1183) NG_050651.2:g.244986= NG_050651.2:g.244986C>T NG_050651.2:g.244986C>G NG_050651.2:g.244986C>A
ABCC4 RefSeqGene NG_050651.1:g.244986= NG_050651.1:g.244986C>T NG_050651.1:g.244986C>G NG_050651.1:g.244986C>A
ABCC4 transcript variant 3 NM_001301829.2:c.3225+1243= NM_001301829.2:c.3225+1243C>T NM_001301829.2:c.3225+1243C>G NM_001301829.2:c.3225+1243C>A
ABCC4 transcript variant 1 NM_005845.3:c.3366+1243= NM_005845.3:c.3366+1243C>T NM_005845.3:c.3366+1243C>G NM_005845.3:c.3366+1243C>A
ABCC4 transcript variant 1 NM_005845.5:c.3366+1243= NM_005845.5:c.3366+1243C>T NM_005845.5:c.3366+1243C>G NM_005845.5:c.3366+1243C>A
ABCC4 transcript variant X1 XM_005254025.1:c.3237+1243= XM_005254025.1:c.3237+1243C>T XM_005254025.1:c.3237+1243C>G XM_005254025.1:c.3237+1243C>A
ABCC4 transcript variant X2 XM_005254025.2:c.3237+1243= XM_005254025.2:c.3237+1243C>T XM_005254025.2:c.3237+1243C>G XM_005254025.2:c.3237+1243C>A
ABCC4 transcript variant X2 XM_005254026.1:c.3225+1243= XM_005254026.1:c.3225+1243C>T XM_005254026.1:c.3225+1243C>G XM_005254026.1:c.3225+1243C>A
ABCC4 transcript variant X3 XM_005254027.1:c.3141+1243= XM_005254027.1:c.3141+1243C>T XM_005254027.1:c.3141+1243C>G XM_005254027.1:c.3141+1243C>A
ABCC4 transcript variant X1 XM_017020319.1:c.3237+1243= XM_017020319.1:c.3237+1243C>T XM_017020319.1:c.3237+1243C>G XM_017020319.1:c.3237+1243C>A
ABCC4 transcript variant X4 XM_017020321.1:c.1851+1243= XM_017020321.1:c.1851+1243C>T XM_017020321.1:c.1851+1243C>G XM_017020321.1:c.1851+1243C>A
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

91 SubSNP, 23 Frequency submissions
No Submitter Submission ID Date (Build)
1 SC_SNP ss13274415 Dec 05, 2003 (119)
2 PERLEGEN ss24224413 Sep 20, 2004 (123)
3 ILLUMINA ss68051109 Nov 30, 2006 (127)
4 ILLUMINA ss71615795 May 17, 2007 (127)
5 ILLUMINA ss75419582 Dec 06, 2007 (129)
6 HUMANGENOME_JCVI ss97184168 Feb 04, 2009 (130)
7 BGI ss103150165 Dec 01, 2009 (131)
8 1000GENOMES ss108012526 Jan 22, 2009 (130)
9 ILLUMINA-UK ss118943653 Dec 01, 2009 (131)
10 KRIBB_YJKIM ss119596060 Dec 01, 2009 (131)
11 ENSEMBL ss143522048 Dec 01, 2009 (131)
12 ILLUMINA ss160999254 Dec 01, 2009 (131)
13 ILLUMINA ss174867671 Jul 04, 2010 (132)
14 BUSHMAN ss199582658 Jul 04, 2010 (132)
15 1000GENOMES ss226357642 Jul 14, 2010 (132)
16 1000GENOMES ss236386236 Jul 15, 2010 (132)
17 1000GENOMES ss242851402 Jul 15, 2010 (132)
18 GMI ss281841694 May 04, 2012 (137)
19 ILLUMINA ss481936012 May 04, 2012 (137)
20 ILLUMINA ss481969333 May 04, 2012 (137)
21 ILLUMINA ss482926032 Sep 08, 2015 (146)
22 ILLUMINA ss485761770 May 04, 2012 (137)
23 ILLUMINA ss537612048 Sep 08, 2015 (146)
24 TISHKOFF ss563852383 Apr 25, 2013 (138)
25 SSMP ss659493428 Apr 25, 2013 (138)
26 ILLUMINA ss779014148 Sep 08, 2015 (146)
27 ILLUMINA ss783326696 Sep 08, 2015 (146)
28 ILLUMINA ss784278480 Sep 08, 2015 (146)
29 ILLUMINA ss832588388 Sep 08, 2015 (146)
30 ILLUMINA ss834476645 Sep 08, 2015 (146)
31 EVA-GONL ss990735453 Aug 21, 2014 (142)
32 JMKIDD_LAB ss1079347618 Aug 21, 2014 (142)
33 1000GENOMES ss1349472202 Aug 21, 2014 (142)
34 1000GENOMES ss1349472203 Aug 21, 2014 (142)
35 EVA_GENOME_DK ss1576999268 Apr 01, 2015 (144)
36 EVA_UK10K_ALSPAC ss1630939251 Apr 01, 2015 (144)
37 EVA_UK10K_ALSPAC ss1630939252 Apr 01, 2015 (144)
38 EVA_UK10K_TWINSUK ss1673933284 Apr 01, 2015 (144)
39 EVA_UK10K_TWINSUK ss1673933285 Apr 01, 2015 (144)
40 EVA_DECODE ss1694725410 Apr 01, 2015 (144)
41 EVA_SVP ss1713414121 Apr 01, 2015 (144)
42 ILLUMINA ss1752118882 Sep 08, 2015 (146)
43 HAMMER_LAB ss1807745099 Sep 08, 2015 (146)
44 WEILL_CORNELL_DGM ss1934096493 Feb 12, 2016 (147)
45 JJLAB ss2027821382 Sep 14, 2016 (149)
46 USC_VALOUEV ss2156187998 Dec 20, 2016 (150)
47 HUMAN_LONGEVITY ss2198959681 Dec 20, 2016 (150)
48 TOPMED ss2363146262 Dec 20, 2016 (150)
49 SYSTEMSBIOZJU ss2628398217 Nov 08, 2017 (151)
50 ILLUMINA ss2633100137 Nov 08, 2017 (151)
51 GRF ss2700581465 Nov 08, 2017 (151)
52 ILLUMINA ss2710790303 Nov 08, 2017 (151)
53 GNOMAD ss2923233778 Nov 08, 2017 (151)
54 AFFY ss2985008866 Nov 08, 2017 (151)
55 AFFY ss2985644588 Nov 08, 2017 (151)
56 SWEGEN ss3011537676 Nov 08, 2017 (151)
57 BIOINF_KMB_FNS_UNIBA ss3027731825 Nov 08, 2017 (151)
58 TOPMED ss3201001123 Nov 08, 2017 (151)
59 TOPMED ss3201001124 Nov 08, 2017 (151)
60 CSHL ss3350610833 Nov 08, 2017 (151)
61 ILLUMINA ss3627129714 Oct 12, 2018 (152)
62 ILLUMINA ss3631101495 Oct 12, 2018 (152)
63 ILLUMINA ss3633060903 Oct 12, 2018 (152)
64 ILLUMINA ss3633763618 Oct 12, 2018 (152)
65 ILLUMINA ss3634556878 Oct 12, 2018 (152)
66 ILLUMINA ss3635453456 Oct 12, 2018 (152)
67 ILLUMINA ss3636245593 Oct 12, 2018 (152)
68 ILLUMINA ss3637204547 Oct 12, 2018 (152)
69 ILLUMINA ss3638027194 Oct 12, 2018 (152)
70 ILLUMINA ss3640264207 Oct 12, 2018 (152)
71 ILLUMINA ss3643015799 Oct 12, 2018 (152)
72 URBANLAB ss3650110160 Oct 12, 2018 (152)
73 ILLUMINA ss3653780283 Oct 12, 2018 (152)
74 EGCUT_WGS ss3678820569 Jul 13, 2019 (153)
75 EVA_DECODE ss3695916002 Jul 13, 2019 (153)
76 ACPOP ss3740033448 Jul 13, 2019 (153)
77 ILLUMINA ss3744857531 Jul 13, 2019 (153)
78 EVA ss3751849575 Jul 13, 2019 (153)
79 ILLUMINA ss3772356582 Jul 13, 2019 (153)
80 KHV_HUMAN_GENOMES ss3817181419 Jul 13, 2019 (153)
81 EVA ss3833714572 Apr 27, 2020 (154)
82 EVA ss3840446606 Apr 27, 2020 (154)
83 EVA ss3845934032 Apr 27, 2020 (154)
84 HGDP ss3847489168 Apr 27, 2020 (154)
85 SGDP_PRJ ss3880637958 Apr 27, 2020 (154)
86 KRGDB ss3929557830 Apr 27, 2020 (154)
87 KOGIC ss3974149700 Apr 27, 2020 (154)
88 EVA ss3985656063 Apr 26, 2021 (155)
89 TOPMED ss4957622612 Apr 26, 2021 (155)
90 TOMMO_GENOMICS ss5211416594 Apr 26, 2021 (155)
91 EVA ss5237531821 Apr 26, 2021 (155)
92 1000Genomes NC_000013.10 - 95713715 Oct 12, 2018 (152)
93 The Avon Longitudinal Study of Parents and Children

Submission ignored due to conflicting rows:
Row 34666547 (NC_000013.10:95713714:G:G 3002/3854, NC_000013.10:95713714:G:T 852/3854)
Row 34666548 (NC_000013.10:95713714:G:G 3853/3854, NC_000013.10:95713714:G:A 1/3854)

- Oct 12, 2018 (152)
94 The Avon Longitudinal Study of Parents and Children

Submission ignored due to conflicting rows:
Row 34666547 (NC_000013.10:95713714:G:G 3002/3854, NC_000013.10:95713714:G:T 852/3854)
Row 34666548 (NC_000013.10:95713714:G:G 3853/3854, NC_000013.10:95713714:G:A 1/3854)

- Oct 12, 2018 (152)
95 Genetic variation in the Estonian population NC_000013.10 - 95713715 Oct 12, 2018 (152)
96 The Danish reference pan genome NC_000013.10 - 95713715 Apr 27, 2020 (154)
97 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 440017003 (NC_000013.11:95061460:G:A 214/139944)
Row 440017004 (NC_000013.11:95061460:G:T 24495/139902)

- Apr 26, 2021 (155)
98 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 440017003 (NC_000013.11:95061460:G:A 214/139944)
Row 440017004 (NC_000013.11:95061460:G:T 24495/139902)

- Apr 26, 2021 (155)
99 Genome of the Netherlands Release 5 NC_000013.10 - 95713715 Apr 27, 2020 (154)
100 HGDP-CEPH-db Supplement 1 NC_000013.9 - 94511716 Apr 27, 2020 (154)
101 HapMap NC_000013.11 - 95061461 Apr 27, 2020 (154)
102 KOREAN population from KRGDB NC_000013.10 - 95713715 Apr 27, 2020 (154)
103 Korean Genome Project NC_000013.11 - 95061461 Apr 27, 2020 (154)
104 Northern Sweden NC_000013.10 - 95713715 Jul 13, 2019 (153)
105 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000013.10 - 95713715 Apr 26, 2021 (155)
106 Qatari NC_000013.10 - 95713715 Apr 27, 2020 (154)
107 SGDP_PRJ NC_000013.10 - 95713715 Apr 27, 2020 (154)
108 Siberian NC_000013.10 - 95713715 Apr 27, 2020 (154)
109 8.3KJPN NC_000013.10 - 95713715 Apr 26, 2021 (155)
110 TopMed NC_000013.11 - 95061461 Apr 26, 2021 (155)
111 UK 10K study - Twins

Submission ignored due to conflicting rows:
Row 34666547 (NC_000013.10:95713714:G:G 2914/3708, NC_000013.10:95713714:G:T 794/3708)
Row 34666548 (NC_000013.10:95713714:G:G 3708/3708, NC_000013.10:95713714:G:A 0/3708)

- Oct 12, 2018 (152)
112 UK 10K study - Twins

Submission ignored due to conflicting rows:
Row 34666547 (NC_000013.10:95713714:G:G 2914/3708, NC_000013.10:95713714:G:T 794/3708)
Row 34666548 (NC_000013.10:95713714:G:G 3708/3708, NC_000013.10:95713714:G:A 0/3708)

- Oct 12, 2018 (152)
113 A Vietnamese Genetic Variation Database NC_000013.10 - 95713715 Jul 13, 2019 (153)
114 ALFA NC_000013.11 - 95061461 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs17234943 Oct 08, 2004 (123)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
62394285, ss563852383, ss1349472202, ss1630939252, ss1673933285, ss2923233778 NC_000013.10:95713714:G:A NC_000013.11:95061460:G:A (self)
12463494354, ss2198959681, ss3201001123 NC_000013.11:95061460:G:A NC_000013.11:95061460:G:A (self)
36735224, ss3929557830 NC_000013.10:95713714:G:C NC_000013.11:95061460:G:C (self)
167060, ss108012526, ss118943653, ss199582658, ss281841694, ss481936012, ss1694725410, ss1713414121, ss3643015799, ss3847489168 NC_000013.9:94511715:G:T NC_000013.11:95061460:G:T (self)
62394285, 24558817, 3437607, 15479533, 36735224, 13318313, 881990, 16138423, 32654938, 8704352, 69385901, 7706614, ss226357642, ss236386236, ss242851402, ss481969333, ss482926032, ss485761770, ss537612048, ss563852383, ss659493428, ss779014148, ss783326696, ss784278480, ss832588388, ss834476645, ss990735453, ss1079347618, ss1349472203, ss1576999268, ss1630939251, ss1673933284, ss1752118882, ss1807745099, ss1934096493, ss2027821382, ss2156187998, ss2363146262, ss2628398217, ss2633100137, ss2700581465, ss2710790303, ss2923233778, ss2985008866, ss2985644588, ss3011537676, ss3350610833, ss3627129714, ss3631101495, ss3633060903, ss3633763618, ss3634556878, ss3635453456, ss3636245593, ss3637204547, ss3638027194, ss3640264207, ss3653780283, ss3678820569, ss3740033448, ss3744857531, ss3751849575, ss3772356582, ss3833714572, ss3840446606, ss3880637958, ss3929557830, ss3985656063, ss5211416594, ss5237531821 NC_000013.10:95713714:G:T NC_000013.11:95061460:G:T (self)
1062846, 30527701, 108367852, 173168270, 12463494354, ss2198959681, ss3027731825, ss3201001124, ss3650110160, ss3695916002, ss3817181419, ss3845934032, ss3974149700, ss4957622612 NC_000013.11:95061460:G:T NC_000013.11:95061460:G:T (self)
ss13274415 NT_009952.13:8803389:G:T NC_000013.11:95061460:G:T (self)
ss24224413, ss68051109, ss71615795, ss75419582, ss97184168, ss103150165, ss119596060, ss143522048, ss160999254, ss174867671 NT_009952.14:8803390:G:T NC_000013.11:95061460:G:T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

7 citations for rs9561778
PMID Title Author Year Journal
19696793 Association study of genetic polymorphism in ABCC4 with cyclophosphamide-induced adverse drug reactions in breast cancer patients. Low SK et al. 2009 Journal of human genetics
21792076 Systematic evaluation of genetic variants in three biological pathways on patient survival in low-stage non-small cell lung cancer. Pankratz VS et al. 2011 Journal of thoracic oncology
23189085 Impact of genetic polymorphisms on chemotherapy toxicity in childhood acute lymphoblastic leukemia. Gervasini G et al. 2012 Frontiers in genetics
24734245 Digging up the human genome: current progress in deciphering adverse drug reactions. Su SC et al. 2014 BioMed research international
24944790 Screening for 392 polymorphisms in 141 pharmacogenes. Kim JY et al. 2014 Biomedical reports
26801900 Pharmacogenetics driving personalized medicine: analysis of genetic polymorphisms related to breast cancer medications in Italian isolated populations. Cocca M et al. 2016 Journal of translational medicine
30363999 ABCC4 Variants Modify Susceptibility to Kawasaki Disease in a Southern Chinese Population. Che D et al. 2018 Disease markers
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post596+ae089ad