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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs7606173

Current Build 155

Released April 9, 2021

Organism
Homo sapiens
Position
chr2:60498316 (GRCh38.p13) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
G>A / G>C / G>T
Variation Type
SNV Single Nucleotide Variation
Frequency
C=0.381136 (100883/264690, TOPMED)
C=0.398552 (55637/139598, GnomAD)
C=0.00823 (138/16760, 8.3KJPN) (+ 18 more)
C=0.27009 (3253/12044, ALFA)
C=0.2871 (1438/5008, 1000G)
C=0.3882 (1739/4480, Estonian)
C=0.4102 (1581/3854, ALSPAC)
C=0.4358 (1616/3708, TWINSUK)
C=0.0161 (47/2922, KOREAN)
C=0.0115 (21/1832, Korea1K)
C=0.428 (427/998, GoNL)
C=0.460 (276/600, NorthernSweden)
C=0.330 (109/330, HapMap)
C=0.306 (66/216, Qatari)
C=0.019 (4/216, Vietnamese)
G=0.367 (77/210, SGDP_PRJ)
G=0.50 (28/56, Ancient Sardinia)
C=0.50 (28/56, Ancient Sardinia)
C=0.38 (15/40, GENOME_DK)
G=0.50 (11/22, Siberian)
C=0.50 (11/22, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
BCL11A : Intron Variant
Publications
9 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20201027095038
Population Group Sample Size Ref Allele Alt Allele
Total Global 12044 G=0.72991 A=0.00000, C=0.27009
European Sub 9724 G=0.7004 A=0.0000, C=0.2996
African Sub 1368 G=0.8114 A=0.0000, C=0.1886
African Others Sub 56 G=0.79 A=0.00, C=0.21
African American Sub 1312 G=0.8125 A=0.0000, C=0.1875
Asian Sub 104 G=1.000 A=0.000, C=0.000
East Asian Sub 78 G=1.00 A=0.00, C=0.00
Other Asian Sub 26 G=1.00 A=0.00, C=0.00
Latin American 1 Sub 54 G=1.00 A=0.00, C=0.00
Latin American 2 Sub 338 G=1.000 A=0.000, C=0.000
South Asian Sub 58 G=1.00 A=0.00, C=0.00
Other Sub 398 G=0.794 A=0.000, C=0.206


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 G=0.618864 C=0.381136
gnomAD - Genomes Global Study-wide 139598 G=0.601448 C=0.398552
gnomAD - Genomes European Sub 75658 G=0.58579 C=0.41421
gnomAD - Genomes African Sub 41758 G=0.56329 C=0.43671
gnomAD - Genomes American Sub 13602 G=0.69637 C=0.30363
gnomAD - Genomes Ashkenazi Jewish Sub 3318 G=0.6649 C=0.3351
gnomAD - Genomes East Asian Sub 3126 G=0.9917 C=0.0083
gnomAD - Genomes Other Sub 2136 G=0.6278 C=0.3722
8.3KJPN JAPANESE Study-wide 16760 G=0.99177 C=0.00823
1000Genomes Global Study-wide 5008 G=0.7129 C=0.2871
1000Genomes African Sub 1322 G=0.5333 C=0.4667
1000Genomes East Asian Sub 1008 G=0.9871 C=0.0129
1000Genomes Europe Sub 1006 G=0.5646 C=0.4354
1000Genomes South Asian Sub 978 G=0.827 C=0.173
1000Genomes American Sub 694 G=0.710 C=0.290
Genetic variation in the Estonian population Estonian Study-wide 4480 G=0.6118 C=0.3882
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 G=0.5898 C=0.4102
UK 10K study - Twins TWIN COHORT Study-wide 3708 G=0.5642 C=0.4358
KOREAN population from KRGDB KOREAN Study-wide 2922 G=0.9839 C=0.0161
Korean Genome Project KOREAN Study-wide 1832 G=0.9885 C=0.0115
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 G=0.572 C=0.428
Northern Sweden ACPOP Study-wide 600 G=0.540 C=0.460
HapMap Global Study-wide 330 G=0.670 C=0.330
HapMap African Sub 120 G=0.558 C=0.442
HapMap American Sub 120 G=0.550 C=0.450
HapMap Asian Sub 90 G=0.98 C=0.02
Qatari Global Study-wide 216 G=0.694 C=0.306
A Vietnamese Genetic Variation Database Global Study-wide 216 G=0.981 C=0.019
SGDP_PRJ Global Study-wide 210 G=0.367 C=0.633
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 56 G=0.50 C=0.50
The Danish reference pan genome Danish Study-wide 40 G=0.62 C=0.38
Siberian Global Study-wide 22 G=0.50 C=0.50
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p13 chr 2 NC_000002.12:g.60498316G>A
GRCh38.p13 chr 2 NC_000002.12:g.60498316G>C
GRCh38.p13 chr 2 NC_000002.12:g.60498316G>T
GRCh37.p13 chr 2 NC_000002.11:g.60725451G>A
GRCh37.p13 chr 2 NC_000002.11:g.60725451G>C
GRCh37.p13 chr 2 NC_000002.11:g.60725451G>T
BCL11A RefSeqGene NG_011968.1:g.60183C>T
BCL11A RefSeqGene NG_011968.1:g.60183C>G
BCL11A RefSeqGene NG_011968.1:g.60183C>A
Gene: BCL11A, BAF chromatin remodeling complex subunit BCL11A (minus strand)
Molecule type Change Amino acid[Codon] SO Term
BCL11A transcript variant 4 NM_001363864.1:c.386-3589…

NM_001363864.1:c.386-35892C>T

N/A Intron Variant
BCL11A transcript variant 5 NM_001365609.1:c.386-3589…

NM_001365609.1:c.386-35892C>T

N/A Intron Variant
BCL11A transcript variant 2 NM_018014.4:c.386-29483C>T N/A Intron Variant
BCL11A transcript variant 1 NM_022893.4:c.386-29483C>T N/A Intron Variant
BCL11A transcript variant 3 NM_138559.2:c.386-29483C>T N/A Intron Variant
BCL11A transcript variant X1 XM_011532909.1:c.386-2948…

XM_011532909.1:c.386-29483C>T

N/A Intron Variant
BCL11A transcript variant X3 XM_011532910.1:c.386-2948…

XM_011532910.1:c.386-29483C>T

N/A Intron Variant
BCL11A transcript variant X2 XM_017004333.1:c.380-2948…

XM_017004333.1:c.380-29483C>T

N/A Intron Variant
BCL11A transcript variant X5 XM_017004335.1:c.380-3589…

XM_017004335.1:c.380-35892C>T

N/A Intron Variant
BCL11A transcript variant X9 XM_017004336.1:c.52+18111…

XM_017004336.1:c.52+18111C>T

N/A Intron Variant
BCL11A transcript variant X7 XM_024452962.1:c.230-2948…

XM_024452962.1:c.230-29483C>T

N/A Intron Variant
BCL11A transcript variant X8 XM_024452963.1:c.230-2948…

XM_024452963.1:c.230-29483C>T

N/A Intron Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement G= A C T
GRCh38.p13 chr 2 NC_000002.12:g.60498316= NC_000002.12:g.60498316G>A NC_000002.12:g.60498316G>C NC_000002.12:g.60498316G>T
GRCh37.p13 chr 2 NC_000002.11:g.60725451= NC_000002.11:g.60725451G>A NC_000002.11:g.60725451G>C NC_000002.11:g.60725451G>T
BCL11A RefSeqGene NG_011968.1:g.60183= NG_011968.1:g.60183C>T NG_011968.1:g.60183C>G NG_011968.1:g.60183C>A
BCL11A transcript variant 4 NM_001363864.1:c.386-35892= NM_001363864.1:c.386-35892C>T NM_001363864.1:c.386-35892C>G NM_001363864.1:c.386-35892C>A
BCL11A transcript variant 5 NM_001365609.1:c.386-35892= NM_001365609.1:c.386-35892C>T NM_001365609.1:c.386-35892C>G NM_001365609.1:c.386-35892C>A
BCL11A transcript variant 2 NM_018014.3:c.386-29483= NM_018014.3:c.386-29483C>T NM_018014.3:c.386-29483C>G NM_018014.3:c.386-29483C>A
BCL11A transcript variant 2 NM_018014.4:c.386-29483= NM_018014.4:c.386-29483C>T NM_018014.4:c.386-29483C>G NM_018014.4:c.386-29483C>A
BCL11A transcript variant 1 NM_022893.3:c.386-29483= NM_022893.3:c.386-29483C>T NM_022893.3:c.386-29483C>G NM_022893.3:c.386-29483C>A
BCL11A transcript variant 1 NM_022893.4:c.386-29483= NM_022893.4:c.386-29483C>T NM_022893.4:c.386-29483C>G NM_022893.4:c.386-29483C>A
BCL11A transcript variant 3 NM_138559.1:c.386-29483= NM_138559.1:c.386-29483C>T NM_138559.1:c.386-29483C>G NM_138559.1:c.386-29483C>A
BCL11A transcript variant 3 NM_138559.2:c.386-29483= NM_138559.2:c.386-29483C>T NM_138559.2:c.386-29483C>G NM_138559.2:c.386-29483C>A
BCL11A transcript variant X1 XM_011532909.1:c.386-29483= XM_011532909.1:c.386-29483C>T XM_011532909.1:c.386-29483C>G XM_011532909.1:c.386-29483C>A
BCL11A transcript variant X3 XM_011532910.1:c.386-29483= XM_011532910.1:c.386-29483C>T XM_011532910.1:c.386-29483C>G XM_011532910.1:c.386-29483C>A
BCL11A transcript variant X2 XM_017004333.1:c.380-29483= XM_017004333.1:c.380-29483C>T XM_017004333.1:c.380-29483C>G XM_017004333.1:c.380-29483C>A
BCL11A transcript variant X5 XM_017004335.1:c.380-35892= XM_017004335.1:c.380-35892C>T XM_017004335.1:c.380-35892C>G XM_017004335.1:c.380-35892C>A
BCL11A transcript variant X9 XM_017004336.1:c.52+18111= XM_017004336.1:c.52+18111C>T XM_017004336.1:c.52+18111C>G XM_017004336.1:c.52+18111C>A
BCL11A transcript variant X7 XM_024452962.1:c.230-29483= XM_024452962.1:c.230-29483C>T XM_024452962.1:c.230-29483C>G XM_024452962.1:c.230-29483C>A
BCL11A transcript variant X8 XM_024452963.1:c.230-29483= XM_024452963.1:c.230-29483C>T XM_024452963.1:c.230-29483C>G XM_024452963.1:c.230-29483C>A
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

63 SubSNP, 19 Frequency submissions
No Submitter Submission ID Date (Build)
1 WI_SSAHASNP ss11522982 Jul 11, 2003 (116)
2 CSHL-HAPMAP ss16820264 Feb 27, 2004 (120)
3 SSAHASNP ss21614842 Apr 05, 2004 (121)
4 ABI ss44176657 Mar 13, 2006 (126)
5 PERLEGEN ss68816487 May 16, 2007 (127)
6 CGM_KYOTO ss76875055 Dec 06, 2007 (129)
7 HGSV ss85616439 Dec 14, 2007 (130)
8 HUMANGENOME_JCVI ss96400315 Feb 04, 2009 (130)
9 KRIBB_YJKIM ss104803362 Feb 04, 2009 (130)
10 1000GENOMES ss109566789 Jan 24, 2009 (130)
11 1000GENOMES ss110356987 Jan 24, 2009 (130)
12 ILLUMINA-UK ss117730006 Feb 14, 2009 (130)
13 ENSEMBL ss135839417 Dec 01, 2009 (131)
14 COMPLETE_GENOMICS ss163503642 Jul 04, 2010 (132)
15 COMPLETE_GENOMICS ss164502235 Jul 04, 2010 (132)
16 1000GENOMES ss219281751 Jul 14, 2010 (132)
17 1000GENOMES ss231194011 Jul 14, 2010 (132)
18 1000GENOMES ss238742981 Jul 15, 2010 (132)
19 BL ss253142648 May 09, 2011 (134)
20 PJP ss292279935 May 09, 2011 (134)
21 TISHKOFF ss555605588 Apr 25, 2013 (138)
22 SSMP ss649193041 Apr 25, 2013 (138)
23 EVA-GONL ss976898526 Aug 21, 2014 (142)
24 JMKIDD_LAB ss1069166633 Aug 21, 2014 (142)
25 1000GENOMES ss1297480000 Aug 21, 2014 (142)
26 DDI ss1428596682 Apr 01, 2015 (144)
27 EVA_GENOME_DK ss1578905948 Apr 01, 2015 (144)
28 EVA_DECODE ss1586312128 Apr 01, 2015 (144)
29 EVA_UK10K_ALSPAC ss1603647212 Apr 01, 2015 (144)
30 EVA_UK10K_TWINSUK ss1646641245 Apr 01, 2015 (144)
31 HAMMER_LAB ss1796832169 Sep 08, 2015 (146)
32 WEILL_CORNELL_DGM ss1920130048 Feb 12, 2016 (147)
33 GENOMED ss1968785677 Jul 19, 2016 (147)
34 JJLAB ss2020599160 Sep 14, 2016 (149)
35 USC_VALOUEV ss2148642907 Dec 20, 2016 (150)
36 HUMAN_LONGEVITY ss2230803348 Dec 20, 2016 (150)
37 TOPMED ss2396745934 Dec 20, 2016 (150)
38 GNOMAD ss2774156407 Nov 08, 2017 (151)
39 AFFY ss2985797466 Nov 08, 2017 (151)
40 SWEGEN ss2989598506 Nov 08, 2017 (151)
41 ILLUMINA ss3021976804 Nov 08, 2017 (151)
42 BIOINF_KMB_FNS_UNIBA ss3024066453 Nov 08, 2017 (151)
43 TOPMED ss3309532175 Nov 08, 2017 (151)
44 CSHL ss3344257029 Nov 08, 2017 (151)
45 URBANLAB ss3647045355 Oct 11, 2018 (152)
46 ILLUMINA ss3652408951 Oct 11, 2018 (152)
47 EGCUT_WGS ss3657573790 Jul 13, 2019 (153)
48 EVA_DECODE ss3704005507 Jul 13, 2019 (153)
49 EVA_DECODE ss3704005508 Jul 13, 2019 (153)
50 ILLUMINA ss3725790486 Jul 13, 2019 (153)
51 ACPOP ss3728484369 Jul 13, 2019 (153)
52 EVA ss3756833466 Jul 13, 2019 (153)
53 KHV_HUMAN_GENOMES ss3801203690 Jul 13, 2019 (153)
54 EVA ss3827010756 Apr 25, 2020 (154)
55 EVA ss3836915363 Apr 25, 2020 (154)
56 EVA ss3842331135 Apr 25, 2020 (154)
57 SGDP_PRJ ss3852391056 Apr 25, 2020 (154)
58 KRGDB ss3897870504 Apr 25, 2020 (154)
59 KOGIC ss3947862740 Apr 25, 2020 (154)
60 EVA ss3984897273 Apr 26, 2021 (155)
61 TOPMED ss4507835052 Apr 26, 2021 (155)
62 TOMMO_GENOMICS ss5151625481 Apr 26, 2021 (155)
63 EVA ss5237295048 Apr 26, 2021 (155)
64 1000Genomes NC_000002.11 - 60725451 Oct 11, 2018 (152)
65 The Avon Longitudinal Study of Parents and Children NC_000002.11 - 60725451 Oct 11, 2018 (152)
66 Genetic variation in the Estonian population NC_000002.11 - 60725451 Oct 11, 2018 (152)
67 The Danish reference pan genome NC_000002.11 - 60725451 Apr 25, 2020 (154)
68 gnomAD - Genomes NC_000002.12 - 60498316 Apr 26, 2021 (155)
69 Genome of the Netherlands Release 5 NC_000002.11 - 60725451 Apr 25, 2020 (154)
70 HapMap NC_000002.12 - 60498316 Apr 25, 2020 (154)
71 KOREAN population from KRGDB NC_000002.11 - 60725451 Apr 25, 2020 (154)
72 Korean Genome Project NC_000002.12 - 60498316 Apr 25, 2020 (154)
73 Northern Sweden NC_000002.11 - 60725451 Jul 13, 2019 (153)
74 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000002.11 - 60725451 Apr 26, 2021 (155)
75 Qatari NC_000002.11 - 60725451 Apr 25, 2020 (154)
76 SGDP_PRJ NC_000002.11 - 60725451 Apr 25, 2020 (154)
77 Siberian NC_000002.11 - 60725451 Apr 25, 2020 (154)
78 8.3KJPN NC_000002.11 - 60725451 Apr 26, 2021 (155)
79 TopMed NC_000002.12 - 60498316 Apr 26, 2021 (155)
80 UK 10K study - Twins NC_000002.11 - 60725451 Oct 11, 2018 (152)
81 A Vietnamese Genetic Variation Database NC_000002.11 - 60725451 Jul 13, 2019 (153)
82 ALFA NC_000002.12 - 60498316 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs57693133 May 24, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
7756003550 NC_000002.12:60498315:G:A NC_000002.12:60498315:G:A
ss85616439 NC_000002.9:60637101:G:C NC_000002.12:60498315:G:C (self)
ss109566789, ss110356987, ss117730006, ss163503642, ss164502235, ss253142648, ss292279935, ss1586312128 NC_000002.10:60578954:G:C NC_000002.12:60498315:G:C (self)
8431752, 4688317, 3312038, 5077186, 2061106, 5047898, 1769234, 123200, 2171978, 4408036, 1159261, 9594788, 4688317, 1019017, ss219281751, ss231194011, ss238742981, ss555605588, ss649193041, ss976898526, ss1069166633, ss1297480000, ss1428596682, ss1578905948, ss1603647212, ss1646641245, ss1796832169, ss1920130048, ss1968785677, ss2020599160, ss2148642907, ss2396745934, ss2774156407, ss2985797466, ss2989598506, ss3021976804, ss3344257029, ss3652408951, ss3657573790, ss3728484369, ss3756833466, ss3827010756, ss3836915363, ss3852391056, ss3897870504, ss3984897273, ss5151625481, ss5237295048 NC_000002.11:60725450:G:C NC_000002.12:60498315:G:C (self)
59852151, 1811556, 4240741, 194443849, 311657931, 7756003550, ss2230803348, ss3024066453, ss3309532175, ss3647045355, ss3704005507, ss3725790486, ss3801203690, ss3842331135, ss3947862740, ss4507835052 NC_000002.12:60498315:G:C NC_000002.12:60498315:G:C (self)
ss11522982 NT_022184.12:39541382:G:C NC_000002.12:60498315:G:C (self)
ss16820264, ss21614842 NT_022184.13:39541382:G:C NC_000002.12:60498315:G:C (self)
ss44176657, ss68816487, ss76875055, ss96400315, ss104803362, ss135839417 NT_022184.15:39547337:G:C NC_000002.12:60498315:G:C (self)
ss3704005508 NC_000002.12:60498315:G:T NC_000002.12:60498315:G:T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

9 citations for rs7606173
PMID Title Author Year Journal
21326311 Genome-wide association study identifies genetic variants influencing F-cell levels in sickle-cell patients. Bhatnagar P et al. 2011 Journal of human genetics
22058279 Beta-thalassemia: from genotype to phenotype. Danjou F et al. 2011 Haematologica
25473424 Enhancer variants: evaluating functions in common disease. Corradin O et al. 2014 Genome medicine
25703683 BCL11A enhancer haplotypes and fetal hemoglobin in sickle cell anemia. Sebastiani P et al. 2015 Blood cells, molecules & diseases
26215470 Genomic approaches to identifying targets for treating β hemoglobinopathies. Ngo DA et al. 2015 BMC medical genomics
26393293 Association between Variants at BCL11A Erythroid-Specific Enhancer and Fetal Hemoglobin Levels among Sickle Cell Disease Patients in Cameroon: Implications for Future Therapeutic Interventions. Pule GD et al. 2015 Omics
27022141 Original Research: A case-control genome-wide association study identifies genetic modifiers of fetal hemoglobin in sickle cell disease. Liu L et al. 2016 Experimental biology and medicine (Maywood, N.J.)
27636225 An Expert Review of Pharmacogenomics of Sickle Cell Disease Therapeutics: Not Yet Ready for Global Precision Medicine. Mnika K et al. 2016 Omics
28332727 Protective BCL11A and HBS1L-MYB polymorphisms in a cohort of 102 Congolese patients suffering from sickle cell anemia. Mikobi TM et al. 2018 Journal of clinical laboratory analysis
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post629+eb05767