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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1794265

Current Build 154

Released April 21, 2020

Organism
Homo sapiens
Position
chr6:32706960 (GRCh38.p12) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
C>A / C>G / C>T
Variation Type
SNV Single Nucleotide Variation
Frequency
G=0.022999 (2888/125568, TOPMED)
G=0.0163 (73/4480, Estonian)
G=0.0296 (130/4386, ALFA Project) (+ 11 more)
G=0.0221 (85/3854, ALSPAC)
G=0.0218 (81/3708, TWINSUK)
A=0.0922 (270/2930, KOREAN)
G=0.027 (27/998, GoNL)
G=0.007 (4/600, NorthernSweden)
G=0.028 (9/326, HapMap)
A=0.005 (1/216, Qatari)
G=0.36 (28/78, SGDP_PRJ)
G=0.05 (2/40, GENOME_DK)
C=0.5 (2/4, Siberian)
G=0.5 (2/4, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
None
Publications
3 citations
Genomic View
See rs on genome
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p12 chr 6 NC_000006.12:g.32706960C>A
GRCh38.p12 chr 6 NC_000006.12:g.32706960C>G
GRCh38.p12 chr 6 NC_000006.12:g.32706960C>T
GRCh37.p13 chr 6 NC_000006.11:g.32674737C>A
GRCh37.p13 chr 6 NC_000006.11:g.32674737C>G
GRCh37.p13 chr 6 NC_000006.11:g.32674737C>T
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.3:g.4120271C>A
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.3:g.4120271C>G
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.3:g.4120271C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.2:g.4120377C>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.2:g.4120377C>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.2:g.4120377C>T
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.2:g.3901235C>A
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.2:g.3901235C>G
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.2:g.3901235C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.1:g.3906831C>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.1:g.3906831C>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.1:g.3906831C>T
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.2:g.3951564C>A
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.2:g.3951564C>G
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.2:g.3951564C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.1:g.3957149C>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.1:g.3957149C>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.1:g.3957149C>T
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.2:g.4107590C>A
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.2:g.4107590C>G
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.2:g.4107590C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.1:g.4106888C>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.1:g.4106888C>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.1:g.4106888C>T
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.2:g.4126767C>A
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.2:g.4126767C>G
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.2:g.4126767C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.1:g.4132387C>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.1:g.4132387C>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.1:g.4132387C>T
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.2:g.4006199C>A
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.2:g.4006199C>G
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.2:g.4006199C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.1:g.4011784C>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.1:g.4011784C>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.1:g.4011784C>T
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

ALFA Allele Frequency (New)
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20200227123210
Population Group Sample Size Ref Allele Alt Allele
Total Global 4386 C=0.9704 G=0.0296
European Sub 4232 C=0.9695 G=0.0305
African Sub 82 C=0.99 G=0.01
African Others Sub 6 C=1.0 G=0.0
African American Sub 76 C=0.99 G=0.01
Asian Sub 4 C=1.0 G=0.0
East Asian Sub 2 C=1.0 G=0.0
Other Asian Sub 2 C=1.0 G=0.0
Latin American 1 Sub 0 C=0 G=0
Latin American 2 Sub 0 C=0 G=0
South Asian Sub 4 C=1.0 G=0.0
Other Sub 64 C=1.00 G=0.00


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 125568 C=0.977001 G=0.022999
Genetic variation in the Estonian population Estonian Study-wide 4480 C=0.9837 G=0.0163
ALFA Total Global 4386 C=0.9704 G=0.0296
ALFA European Sub 4232 C=0.9695 G=0.0305
ALFA African Sub 82 C=0.99 G=0.01
ALFA Other Sub 64 C=1.00 G=0.00
ALFA South Asian Sub 4 C=1.0 G=0.0
ALFA Asian Sub 4 C=1.0 G=0.0
ALFA Latin American 1 Sub 0 C=0 G=0
ALFA Latin American 2 Sub 0 C=0 G=0
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 C=0.9779 G=0.0221
UK 10K study - Twins TWIN COHORT Study-wide 3708 C=0.9782 G=0.0218
KOREAN population from KRGDB KOREAN Study-wide 2930 C=0.8683 A=0.0922, G=0.0396
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 C=0.973 G=0.027
Northern Sweden ACPOP Study-wide 600 C=0.993 G=0.007
HapMap Global Study-wide 326 C=0.972 G=0.028
HapMap American Sub 120 C=0.975 G=0.025
HapMap African Sub 118 C=0.992 G=0.008
HapMap Asian Sub 88 C=0.94 G=0.06
Qatari Global Study-wide 216 C=0.995 A=0.005
SGDP_PRJ Global Study-wide 78 C=0.46 A=0.15, G=0.36, T=0.03
The Danish reference pan genome Danish Study-wide 40 C=0.95 G=0.05
Siberian Global Study-wide 4 C=0.5 G=0.5
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement C= A G T
GRCh38.p12 chr 6 NC_000006.12:g.32706960= NC_000006.12:g.32706960C>A NC_000006.12:g.32706960C>G NC_000006.12:g.32706960C>T
GRCh37.p13 chr 6 NC_000006.11:g.32674737= NC_000006.11:g.32674737C>A NC_000006.11:g.32674737C>G NC_000006.11:g.32674737C>T
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.3:g.4120271= NT_113891.3:g.4120271C>A NT_113891.3:g.4120271C>G NT_113891.3:g.4120271C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.2:g.4120377= NT_113891.2:g.4120377C>A NT_113891.2:g.4120377C>G NT_113891.2:g.4120377C>T
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.2:g.3901235= NT_167248.2:g.3901235C>A NT_167248.2:g.3901235C>G NT_167248.2:g.3901235C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.1:g.3906831= NT_167248.1:g.3906831C>A NT_167248.1:g.3906831C>G NT_167248.1:g.3906831C>T
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.2:g.3951564= NT_167245.2:g.3951564C>A NT_167245.2:g.3951564C>G NT_167245.2:g.3951564C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.1:g.3957149= NT_167245.1:g.3957149C>A NT_167245.1:g.3957149C>G NT_167245.1:g.3957149C>T
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.2:g.4107590= NT_167249.2:g.4107590C>A NT_167249.2:g.4107590C>G NT_167249.2:g.4107590C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.1:g.4106888= NT_167249.1:g.4106888C>A NT_167249.1:g.4106888C>G NT_167249.1:g.4106888C>T
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.2:g.4126767= NT_167246.2:g.4126767C>A NT_167246.2:g.4126767C>G NT_167246.2:g.4126767C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.1:g.4132387= NT_167246.1:g.4132387C>A NT_167246.1:g.4132387C>G NT_167246.1:g.4132387C>T
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.2:g.4006199= NT_167247.2:g.4006199C>A NT_167247.2:g.4006199C>G NT_167247.2:g.4006199C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.1:g.4011784= NT_167247.1:g.4011784C>A NT_167247.1:g.4011784C>G NT_167247.1:g.4011784C>T
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

46 SubSNP, 19 Frequency submissions
No Submitter Submission ID Date (Build)
1 SC_JCM ss2660406 Nov 09, 2000 (89)
2 ILLUMINA ss75299909 Dec 06, 2007 (129)
3 KRIBB_YJKIM ss119403716 Dec 01, 2009 (131)
4 ILLUMINA ss123181653 Dec 01, 2009 (137)
5 ILLUMINA ss153734671 Dec 01, 2009 (137)
6 ILLUMINA ss170814267 Jul 04, 2010 (132)
7 ILLUMINA ss172922311 Jul 04, 2010 (132)
8 1000GENOMES ss233415741 Jul 14, 2010 (137)
9 1000GENOMES ss240482696 Jul 15, 2010 (137)
10 BL ss254213271 May 09, 2011 (137)
11 GMI ss278741409 May 04, 2012 (137)
12 ILLUMINA ss535039784 Sep 08, 2015 (146)
13 ILLUMINA ss825652171 Apr 01, 2015 (144)
14 EVA-GONL ss982786162 Aug 21, 2014 (142)
15 JMKIDD_LAB ss1073512686 Aug 21, 2014 (142)
16 EVA_GENOME_DK ss1581614800 Apr 01, 2015 (144)
17 EVA_DECODE ss1592320518 Apr 01, 2015 (144)
18 EVA_DECODE ss1592320519 Apr 01, 2015 (144)
19 EVA_UK10K_ALSPAC ss1615292156 Apr 01, 2015 (144)
20 EVA_UK10K_TWINSUK ss1658286189 Apr 01, 2015 (144)
21 EVA_SVP ss1712852510 Apr 01, 2015 (144)
22 WEILL_CORNELL_DGM ss1926043892 Feb 12, 2016 (147)
23 JJLAB ss2023656723 Sep 14, 2016 (149)
24 ILLUMINA ss2094826268 Dec 20, 2016 (150)
25 ILLUMINA ss2095180077 Dec 20, 2016 (150)
26 USC_VALOUEV ss2151832440 Dec 20, 2016 (150)
27 HUMAN_LONGEVITY ss2282992913 Dec 20, 2016 (150)
28 TOPMED ss2451373773 Dec 20, 2016 (150)
29 TOPMED ss2451373774 Dec 20, 2016 (150)
30 GRF ss2707427202 Nov 08, 2017 (151)
31 GNOMAD ss2837518089 Nov 08, 2017 (151)
32 SWEGEN ss2998840982 Nov 08, 2017 (151)
33 TOPMED ss3494051168 Nov 08, 2017 (151)
34 TOPMED ss3494051169 Nov 08, 2017 (151)
35 TOPMED ss3494051170 Nov 08, 2017 (151)
36 ILLUMINA ss3629511380 Oct 12, 2018 (152)
37 ILLUMINA ss3638621828 Oct 12, 2018 (152)
38 ILLUMINA ss3643563413 Oct 12, 2018 (152)
39 ILLUMINA ss3653119620 Oct 12, 2018 (152)
40 EGCUT_WGS ss3666728623 Jul 13, 2019 (153)
41 EVA_DECODE ss3716939106 Jul 13, 2019 (153)
42 EVA_DECODE ss3716939107 Jul 13, 2019 (153)
43 ACPOP ss3733381566 Jul 13, 2019 (153)
44 EVA ss3764846440 Jul 13, 2019 (153)
45 SGDP_PRJ ss3864302167 Apr 26, 2020 (154)
46 KRGDB ss3911080157 Apr 26, 2020 (154)
47 The Avon Longitudinal Study of Parents and Children NC_000006.11 - 32674737 Oct 12, 2018 (152)
48 Genetic variation in the Estonian population NC_000006.11 - 32674737 Oct 12, 2018 (152)
49 The Danish reference pan genome NC_000006.11 - 32674737 Apr 26, 2020 (154)
50 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 85754952 (NC_000006.11:32674736:C:C 31261/31376, NC_000006.11:32674736:C:A 115/31376)
Row 85754953 (NC_000006.11:32674736:C:C 30764/31376, NC_000006.11:32674736:C:G 612/31376)
Row 85754954 (NC_000006.11:32674736:C:C 31375/31376, NC_000006.11:32674736:C:T 1/31376)

- Jul 13, 2019 (153)
51 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 85754952 (NC_000006.11:32674736:C:C 31261/31376, NC_000006.11:32674736:C:A 115/31376)
Row 85754953 (NC_000006.11:32674736:C:C 30764/31376, NC_000006.11:32674736:C:G 612/31376)
Row 85754954 (NC_000006.11:32674736:C:C 31375/31376, NC_000006.11:32674736:C:T 1/31376)

- Jul 13, 2019 (153)
52 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 85754952 (NC_000006.11:32674736:C:C 31261/31376, NC_000006.11:32674736:C:A 115/31376)
Row 85754953 (NC_000006.11:32674736:C:C 30764/31376, NC_000006.11:32674736:C:G 612/31376)
Row 85754954 (NC_000006.11:32674736:C:C 31375/31376, NC_000006.11:32674736:C:T 1/31376)

- Jul 13, 2019 (153)
53 Genome of the Netherlands Release 5 NC_000006.11 - 32674737 Apr 26, 2020 (154)
54 HapMap NC_000006.12 - 32706960 Apr 26, 2020 (154)
55 KOREAN population from KRGDB NC_000006.11 - 32674737 Apr 26, 2020 (154)
56 Northern Sweden NC_000006.11 - 32674737 Jul 13, 2019 (153)
57 Qatari NC_000006.11 - 32674737 Apr 26, 2020 (154)
58 SGDP_PRJ NC_000006.11 - 32674737 Apr 26, 2020 (154)
59 Siberian NC_000006.11 - 32674737 Apr 26, 2020 (154)
60 TopMed NC_000006.12 - 32706960 Oct 12, 2018 (152)
61 UK 10K study - Twins NC_000006.11 - 32674737 Oct 12, 2018 (152)
62 A Vietnamese Genetic Variation Database

Submission ignored due to conflicting rows:
Row 3880216 (NC_000006.11:32674736:C:C 195/207, NC_000006.11:32674736:C:A 12/207)
Row 3880217 (NC_000006.11:32674736:C:C 195/203, NC_000006.11:32674736:C:G 8/203)
Row 3880218 (NC_000006.11:32674736:C:C 195/196, NC_000006.11:32674736:C:T 1/196)

- Jul 13, 2019 (153)
63 A Vietnamese Genetic Variation Database

Submission ignored due to conflicting rows:
Row 3880216 (NC_000006.11:32674736:C:C 195/207, NC_000006.11:32674736:C:A 12/207)
Row 3880217 (NC_000006.11:32674736:C:C 195/203, NC_000006.11:32674736:C:G 8/203)
Row 3880218 (NC_000006.11:32674736:C:C 195/196, NC_000006.11:32674736:C:T 1/196)

- Jul 13, 2019 (153)
64 A Vietnamese Genetic Variation Database

Submission ignored due to conflicting rows:
Row 3880216 (NC_000006.11:32674736:C:C 195/207, NC_000006.11:32674736:C:A 12/207)
Row 3880217 (NC_000006.11:32674736:C:C 195/203, NC_000006.11:32674736:C:G 8/203)
Row 3880218 (NC_000006.11:32674736:C:C 195/196, NC_000006.11:32674736:C:T 1/196)

- Jul 13, 2019 (153)
65 dbGaP Population Frequency Project NC_000006.12 - 32706960 Apr 26, 2020 (154)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs78835323 May 04, 2012 (137)
rs115190898 May 04, 2012 (137)
rs117563973 Aug 16, 2010 (132)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss278741409, ss1592320518 NC_000006.10:32782714:C:A NC_000006.12:32706959:C:A (self)
18257551, 8085822, 16319147, ss233415741, ss240482696, ss535039784, ss1926043892, ss2451373773, ss2707427202, ss2837518089, ss3629511380, ss3764846440, ss3864302167, ss3911080157 NC_000006.11:32674736:C:A NC_000006.12:32706959:C:A (self)
ss2282992913, ss3494051168, ss3716939106 NC_000006.12:32706959:C:A NC_000006.12:32706959:C:A (self)
ss254213271, ss825652171, ss1592320519, ss1712852510, ss3643563413 NC_000006.10:32782714:C:G NC_000006.12:32706959:C:G (self)
17483695, 12466871, 7779739, 7780606, 18257551, 6666431, 16319147, 4348794, 17483695, ss233415741, ss240482696, ss982786162, ss1073512686, ss1581614800, ss1615292156, ss1658286189, ss2023656723, ss2094826268, ss2095180077, ss2151832440, ss2451373774, ss2837518089, ss2998840982, ss3638621828, ss3653119620, ss3666728623, ss3733381566, ss3864302167, ss3911080157 NC_000006.11:32674736:C:G NC_000006.12:32706959:C:G (self)
3102819, 335163663, 103642745, ss2282992913, ss3494051169, ss3716939107 NC_000006.12:32706959:C:G NC_000006.12:32706959:C:G (self)
ss2660406, ss75299909, ss119403716, ss123181653, ss153734671, ss170814267, ss172922311 NT_007592.15:32614736:C:G NC_000006.12:32706959:C:G (self)
16319147, ss2837518089, ss3864302167 NC_000006.11:32674736:C:T NC_000006.12:32706959:C:T (self)
ss2282992913, ss3494051170 NC_000006.12:32706959:C:T NC_000006.12:32706959:C:T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

3 citations for rs1794265
PMID Title Author Year Journal
20639881 Genome-wide association study of follicular lymphoma identifies a risk locus at 6p21.32. Conde L et al. 2010 Nature genetics
21439368 A search for overlapping genetic susceptibility loci between non-Hodgkin lymphoma and autoimmune diseases. Conde L et al. 2011 Genomics
21533074 GWAS of follicular lymphoma reveals allelic heterogeneity at 6p21.32 and suggests shared genetic susceptibility with diffuse large B-cell lymphoma. Smedby KE et al. 2011 PLoS genetics
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post536+f5d31d6