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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs17426593

Current Build 154

Released April 21, 2020

Organism
Homo sapiens
Position
chr6:32640300 (GRCh38.p12) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
T>A / T>C / T>G
Variation Type
SNV Single Nucleotide Variation
Frequency
C=0.15741 (4902/31142, GnomAD)
C=0.1645 (824/5008, 1000G)
C=0.1221 (547/4480, Estonian) (+ 7 more)
C=0.3235 (948/2930, KOREAN)
C=0.1738 (327/1882, HapMap)
C=0.166 (166/998, GoNL)
C=0.287 (172/600, NorthernSweden)
C=0.148 (32/216, Qatari)
T=0.429 (78/182, SGDP_PRJ)
T=0.46 (11/24, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
HLA-DQA1 : Intron Variant
LOC107986589 : Non Coding Transcript Variant
Publications
1 citation
Genomic View
See rs on genome
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p12 chr 6 NC_000006.12:g.32640300T>A
GRCh38.p12 chr 6 NC_000006.12:g.32640300T>C
GRCh38.p12 chr 6 NC_000006.12:g.32640300T>G
GRCh37.p13 chr 6 NC_000006.11:g.32608077T>A
GRCh37.p13 chr 6 NC_000006.11:g.32608077T>C
GRCh37.p13 chr 6 NC_000006.11:g.32608077T>G
HLA-DQA1 RefSeqGene NG_032876.1:g.7895T>A
HLA-DQA1 RefSeqGene NG_032876.1:g.7895T>C
HLA-DQA1 RefSeqGene NG_032876.1:g.7895T>G
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.3:g.4058396T>A
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.3:g.4058396T>C
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.3:g.4058396T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.2:g.4058502T>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.2:g.4058502T>C
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.2:g.4058502T>G
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.2:g.3839365T>A
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.2:g.3839365T>C
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.2:g.3839365T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.1:g.3844961T>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.1:g.3844961T>C
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.1:g.3844961T>G
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.2:g.3884157T>A
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.2:g.3884157T>C
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.2:g.3884157T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.1:g.3889742T>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.1:g.3889742T>C
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.1:g.3889742T>G
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.2:g.4042171C>T
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.2:g.4042171C>A
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.2:g.4042171C>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.1:g.4041469C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.1:g.4041469C>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.1:g.4041469C>G
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.2:g.4058555T>A
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.2:g.4058555T>C
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.2:g.4058555T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.1:g.4064175T>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.1:g.4064175T>C
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.1:g.4064175T>G
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.2:g.3941302C>T
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.2:g.3941302C>A
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.2:g.3941302C>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.1:g.3946887C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.1:g.3946887C>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.1:g.3946887C>G
Gene: HLA-DQA1, major histocompatibility complex, class II, DQ alpha 1 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
HLA-DQA1 transcript NM_002122.5:c.83-1010T>A N/A Intron Variant
HLA-DQA1 transcript variant X1 XM_006715079.4:c.83-1010T…

XM_006715079.4:c.83-1010T>A

N/A Intron Variant
Gene: LOC107986589, uncharacterized LOC107986589 (minus strand)
Molecule type Change Amino acid[Codon] SO Term
LOC107986589 transcript XR_001744085.1:n.268A>T N/A Non Coding Transcript Variant
LOC107986589 transcript XR_001744085.1:n.268A>G N/A Non Coding Transcript Variant
LOC107986589 transcript XR_001744085.1:n.268A>C N/A Non Coding Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
gnomAD - Genomes Global Study-wide 31142 T=0.84259 C=0.15741
gnomAD - Genomes European Sub 18710 T=0.83185 C=0.16815
gnomAD - Genomes African Sub 8698 T=0.8995 C=0.1005
gnomAD - Genomes East Asian Sub 1552 T=0.7152 C=0.2848
gnomAD - Genomes Other Sub 1066 T=0.8499 C=0.1501
gnomAD - Genomes American Sub 840 T=0.726 C=0.274
gnomAD - Genomes Ashkenazi Jewish Sub 276 T=0.819 C=0.181
1000Genomes Global Study-wide 5008 T=0.8355 C=0.1645
1000Genomes African Sub 1322 T=0.9047 C=0.0953
1000Genomes East Asian Sub 1008 T=0.7500 C=0.2500
1000Genomes Europe Sub 1006 T=0.8400 C=0.1600
1000Genomes South Asian Sub 978 T=0.901 C=0.099
1000Genomes American Sub 694 T=0.729 C=0.271
Genetic variation in the Estonian population Estonian Study-wide 4480 T=0.8779 C=0.1221
KOREAN population from KRGDB KOREAN Study-wide 2930 T=0.6765 A=0.0000, C=0.3235, G=0.0000
HapMap Global Study-wide 1882 T=0.8262 C=0.1738
HapMap American Sub 766 T=0.779 C=0.221
HapMap African Sub 686 T=0.910 C=0.090
HapMap Asian Sub 254 T=0.669 C=0.331
HapMap Europe Sub 176 T=0.932 C=0.068
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 T=0.834 C=0.166
Northern Sweden ACPOP Study-wide 600 T=0.713 C=0.287
Qatari Global Study-wide 216 T=0.852 C=0.148
SGDP_PRJ Global Study-wide 182 T=0.429 C=0.571
Siberian Global Study-wide 24 T=0.46 C=0.54
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement T= A C G
GRCh38.p12 chr 6 NC_000006.12:g.32640300= NC_000006.12:g.32640300T>A NC_000006.12:g.32640300T>C NC_000006.12:g.32640300T>G
GRCh37.p13 chr 6 NC_000006.11:g.32608077= NC_000006.11:g.32608077T>A NC_000006.11:g.32608077T>C NC_000006.11:g.32608077T>G
HLA-DQA1 RefSeqGene NG_032876.1:g.7895= NG_032876.1:g.7895T>A NG_032876.1:g.7895T>C NG_032876.1:g.7895T>G
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.3:g.4058396= NT_113891.3:g.4058396T>A NT_113891.3:g.4058396T>C NT_113891.3:g.4058396T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.2:g.4058502= NT_113891.2:g.4058502T>A NT_113891.2:g.4058502T>C NT_113891.2:g.4058502T>G
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.2:g.3839365= NT_167248.2:g.3839365T>A NT_167248.2:g.3839365T>C NT_167248.2:g.3839365T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.1:g.3844961= NT_167248.1:g.3844961T>A NT_167248.1:g.3844961T>C NT_167248.1:g.3844961T>G
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.2:g.3884157= NT_167245.2:g.3884157T>A NT_167245.2:g.3884157T>C NT_167245.2:g.3884157T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.1:g.3889742= NT_167245.1:g.3889742T>A NT_167245.1:g.3889742T>C NT_167245.1:g.3889742T>G
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.2:g.4042171C>T NT_167249.2:g.4042171C>A NT_167249.2:g.4042171= NT_167249.2:g.4042171C>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.1:g.4041469C>T NT_167249.1:g.4041469C>A NT_167249.1:g.4041469= NT_167249.1:g.4041469C>G
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.2:g.4058555= NT_167246.2:g.4058555T>A NT_167246.2:g.4058555T>C NT_167246.2:g.4058555T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.1:g.4064175= NT_167246.1:g.4064175T>A NT_167246.1:g.4064175T>C NT_167246.1:g.4064175T>G
GRCh38.p12 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.2:g.3941302C>T NT_167247.2:g.3941302C>A NT_167247.2:g.3941302= NT_167247.2:g.3941302C>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.1:g.3946887C>T NT_167247.1:g.3946887C>A NT_167247.1:g.3946887= NT_167247.1:g.3946887C>G
LOC107986589 transcript XR_001744085.1:n.268= XR_001744085.1:n.268A>T XR_001744085.1:n.268A>G XR_001744085.1:n.268A>C
HLA-DQA1 transcript NM_002122.3:c.83-1010= NM_002122.3:c.83-1010T>A NM_002122.3:c.83-1010T>C NM_002122.3:c.83-1010T>G
HLA-DQA1 transcript NM_002122.5:c.83-1010= NM_002122.5:c.83-1010T>A NM_002122.5:c.83-1010T>C NM_002122.5:c.83-1010T>G
HLA-DQA1 transcript variant X1 XM_003846467.2:c.83-998C>T XM_003846467.2:c.83-998C>A XM_003846467.2:c.83-998= XM_003846467.2:c.83-998C>G
HLA-DQA1 transcript variant X2 XM_003846468.2:c.83-998C>T XM_003846468.2:c.83-998C>A XM_003846468.2:c.83-998= XM_003846468.2:c.83-998C>G
HLA-DQA1 transcript variant X1 XM_005249049.1:c.83-1010= XM_005249049.1:c.83-1010T>A XM_005249049.1:c.83-1010T>C XM_005249049.1:c.83-1010T>G
HLA-DQA1 transcript variant X1 XM_005274953.1:c.83-997= XM_005274953.1:c.83-997T>A XM_005274953.1:c.83-997T>C XM_005274953.1:c.83-997T>G
HLA-DQA1 transcript variant X2 XM_005274954.1:c.68-997= XM_005274954.1:c.68-997T>A XM_005274954.1:c.68-997T>C XM_005274954.1:c.68-997T>G
HLA-DQA1 transcript variant X1 XM_005275108.1:c.83-997= XM_005275108.1:c.83-997T>A XM_005275108.1:c.83-997T>C XM_005275108.1:c.83-997T>G
HLA-DQA1 transcript variant X2 XM_005275109.1:c.68-997= XM_005275109.1:c.68-997T>A XM_005275109.1:c.68-997T>C XM_005275109.1:c.68-997T>G
HLA-DQA1 transcript variant X3 XM_005275332.1:c.68-998C>T XM_005275332.1:c.68-998C>A XM_005275332.1:c.68-998= XM_005275332.1:c.68-998C>G
HLA-DQA1 transcript variant X4 XM_005275333.1:c.83-998C>T XM_005275333.1:c.83-998C>A XM_005275333.1:c.83-998= XM_005275333.1:c.83-998C>G
HLA-DQA1 transcript variant X1 XM_005275542.1:c.83-998C>T XM_005275542.1:c.83-998C>A XM_005275542.1:c.83-998= XM_005275542.1:c.83-998C>G
HLA-DQA1 transcript variant X2 XM_005275543.1:c.68-998C>T XM_005275543.1:c.68-998C>A XM_005275543.1:c.68-998= XM_005275543.1:c.68-998C>G
HLA-DQA1 transcript variant X3 XM_005275544.1:c.83-998C>T XM_005275544.1:c.83-998C>A XM_005275544.1:c.83-998= XM_005275544.1:c.83-998C>G
HLA-DQA1 transcript variant X1 XM_006715079.4:c.83-1010= XM_006715079.4:c.83-1010T>A XM_006715079.4:c.83-1010T>C XM_006715079.4:c.83-1010T>G
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

43 SubSNP, 10 Frequency submissions
No Submitter Submission ID Date (Build)
1 PERLEGEN ss24651660 Sep 20, 2004 (123)
2 ABI ss43528953 Mar 14, 2006 (126)
3 UWGC ss50398026 Mar 16, 2006 (130)
4 SI_MHC_SNP ss52050531 Oct 18, 2006 (130)
5 AFFY ss76495110 Dec 07, 2007 (129)
6 KRIBB_YJKIM ss105100945 Feb 04, 2009 (130)
7 COMPLETE_GENOMICS ss162212478 Jul 04, 2010 (132)
8 BUSHMAN ss201645876 Jul 04, 2010 (132)
9 BCM-HGSC-SUB ss207751672 Jul 04, 2010 (132)
10 1000GENOMES ss222315150 Jul 14, 2010 (132)
11 1000GENOMES ss233412319 Jul 14, 2010 (132)
12 1000GENOMES ss240479879 Jul 15, 2010 (132)
13 ILLUMINA ss244283661 Jul 04, 2010 (142)
14 GMI ss278738837 May 04, 2012 (137)
15 GMI ss285379362 Apr 25, 2013 (138)
16 SSMP ss653049207 Apr 25, 2013 (138)
17 EVA-GONL ss982782873 Aug 21, 2014 (142)
18 1000GENOMES ss1319592937 Aug 21, 2014 (142)
19 EVA_SVP ss1712852398 Apr 01, 2015 (144)
20 WEILL_CORNELL_DGM ss1926039560 Feb 12, 2016 (147)
21 JJLAB ss2023653573 Sep 14, 2016 (149)
22 ILLUMINA ss2095179837 Dec 20, 2016 (150)
23 USC_VALOUEV ss2151828300 Dec 20, 2016 (150)
24 HUMAN_LONGEVITY ss2282989705 Dec 20, 2016 (150)
25 TOPMED ss2451369283 Dec 20, 2016 (150)
26 GRF ss2707422740 Nov 08, 2017 (151)
27 ILLUMINA ss2711072103 Nov 08, 2017 (151)
28 GNOMAD ss2837511443 Nov 08, 2017 (151)
29 SWEGEN ss2998834850 Nov 08, 2017 (151)
30 TOPMED ss3494036717 Nov 08, 2017 (151)
31 ILLUMINA ss3653118431 Oct 12, 2018 (152)
32 EGCUT_WGS ss3666725822 Jul 13, 2019 (153)
33 EVA_DECODE ss3716934596 Jul 13, 2019 (153)
34 ACPOP ss3733377404 Jul 13, 2019 (153)
35 EVA ss3764842671 Jul 13, 2019 (153)
36 PACBIO ss3790792844 Jul 13, 2019 (153)
37 PACBIO ss3795671203 Jul 13, 2019 (153)
38 KHV_HUMAN_GENOMES ss3807998167 Jul 13, 2019 (153)
39 EVA ss3829846406 Apr 26, 2020 (154)
40 EVA ss3838400583 Apr 26, 2020 (154)
41 EVA ss3843843816 Apr 26, 2020 (154)
42 SGDP_PRJ ss3864296259 Apr 26, 2020 (154)
43 KRGDB ss3911074186 Apr 26, 2020 (154)
44 1000Genomes NC_000006.11 - 32608077 Oct 12, 2018 (152)
45 Genetic variation in the Estonian population NC_000006.11 - 32608077 Oct 12, 2018 (152)
46 gnomAD - Genomes NC_000006.11 - 32608077 Jul 13, 2019 (153)
47 Genome of the Netherlands Release 5 NC_000006.11 - 32608077 Apr 26, 2020 (154)
48 HapMap NC_000006.12 - 32640300 Apr 26, 2020 (154)
49 KOREAN population from KRGDB NC_000006.11 - 32608077 Apr 26, 2020 (154)
50 Northern Sweden NC_000006.11 - 32608077 Jul 13, 2019 (153)
51 Qatari NC_000006.11 - 32608077 Apr 26, 2020 (154)
52 SGDP_PRJ NC_000006.11 - 32608077 Apr 26, 2020 (154)
53 Siberian NC_000006.11 - 32608077 Apr 26, 2020 (154)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs36221117 May 23, 2008 (130)
rs41269947 May 23, 2008 (130)
rs113272834 Aug 21, 2014 (142)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
18251580, ss3911074186 NC_000006.11:32608076:T:A NC_000006.12:32640299:T:A
ss24651660, ss43528953, ss50398026, ss162212478, ss201645876, ss207751672, ss278738837, ss285379362, ss1712852398 NC_000006.10:32716054:T:C NC_000006.12:32640299:T:C (self)
31361701, 12464070, 85748338, 7777937, 18251580, 6662269, 8081490, 16313239, 4344654, ss222315150, ss233412319, ss240479879, ss653049207, ss982782873, ss1319592937, ss1926039560, ss2023653573, ss2095179837, ss2151828300, ss2451369283, ss2707422740, ss2711072103, ss2837511443, ss2998834850, ss3653118431, ss3666725822, ss3733377404, ss3764842671, ss3790792844, ss3795671203, ss3829846406, ss3838400583, ss3864296259, ss3911074186 NC_000006.11:32608076:T:C NC_000006.12:32640299:T:C (self)
3102515, ss2282989705, ss3494036717, ss3716934596, ss3807998167, ss3843843816 NC_000006.12:32640299:T:C NC_000006.12:32640299:T:C (self)
ss52050531, ss76495110, ss105100945, ss244283661 NT_007592.15:32548076:T:C NC_000006.12:32640299:T:C (self)
18251580, ss3911074186 NC_000006.11:32608076:T:G NC_000006.12:32640299:T:G
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs17426593
PMID Title Author Year Journal
22510351 Defining a gene promoter methylation signature in sputum for lung cancer risk assessment. Leng S et al. 2012 Clinical cancer research
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The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post536+f5d31d6