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dbSNP Short Genetic Variations

Reference SNP (rs) Report

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This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1108842

Current Build 151

Released July 17, 2018

Organism
Homo sapiens
Position
chr3:52686064 (GRCh38.p7) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
A>C / A>G / A>T
Variation Type
SNV Single Nucleotide Variation
Frequency
C=0.49487 (120789/244080, GnomAD)
A=0.47427 (59553/125568, TOPMED)
C=0.49288 (58468/118626, ExAC) (+ 5 more)
A=0.4899 (15083/30788, GnomAD)
A=0.4791 (6231/13006, GO-ESP)
C=0.490 (2456/5008, 1000G)
C=0.494 (1903/3854, ALSPAC)
C=0.494 (1832/3708, TWINSUK)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
GNL3 : Intron Variant
PBRM1 : 2KB Upstream Variant
Publications
4 citations
Genomic View
See rs on genome
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p7 chr 3 NC_000003.12:g.52686064A>C
GRCh38.p7 chr 3 NC_000003.12:g.52686064A>G
GRCh38.p7 chr 3 NC_000003.12:g.52686064A>T
GRCh37.p13 chr 3 NC_000003.11:g.52720080A>C
GRCh37.p13 chr 3 NC_000003.11:g.52720080A>G
GRCh37.p13 chr 3 NC_000003.11:g.52720080A>T
PBRM1 RefSeqGene NG_032108.1:g.4787T>G
PBRM1 RefSeqGene NG_032108.1:g.4787T>C
PBRM1 RefSeqGene NG_032108.1:g.4787T>A
GNL3 RefSeqGene NG_027871.1:g.5145A>C
GNL3 RefSeqGene NG_027871.1:g.5145A>G
GNL3 RefSeqGene NG_027871.1:g.5145A>T
Gene: GNL3, G protein nucleolar 3 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
GNL3 transcript variant 3 NM_206826.1:c. N/A Intron Variant
GNL3 transcript variant 1 NM_014366.4:c. N/A 5 Prime UTR Variant
GNL3 transcript variant 2 NM_206825.1:c. N/A 5 Prime UTR Variant
Gene: PBRM1, polybromo 1 (minus strand) : 2KB Upstream Variant
Molecule type Change Amino acid[Codon] SO Term
PBRM1 transcript variant 2 NM_018313.4:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X25 XM_005265279.4:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X28 XM_005265280.3:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X28 XM_005265282.3:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X29 XM_005265283.3:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X9 XM_011533900.2:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X8 XM_011533902.2:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X10 XM_011533903.2:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X1 XM_017006725.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X2 XM_017006726.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X3 XM_017006727.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X4 XM_017006728.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X5 XM_017006729.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X6 XM_017006730.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X7 XM_017006731.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X11 XM_017006732.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X12 XM_017006733.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X13 XM_017006734.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X14 XM_017006735.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X17 XM_017006736.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X18 XM_017006737.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X17 XM_017006738.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X20 XM_017006739.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X21 XM_017006740.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X20 XM_017006741.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X23 XM_017006742.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X22 XM_017006743.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X25 XM_017006744.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X24 XM_017006745.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X27 XM_017006746.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X31 XM_017006747.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X32 XM_017006748.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X33 XM_017006749.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X34 XM_017006750.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X34 XM_017006751.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X36 XM_017006752.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X36 XM_017006753.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X38 XM_017006754.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X38 XM_017006755.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X39 XM_017006756.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X40 XM_017006757.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X42 XM_017006759.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X43 XM_017006760.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X44 XM_017006761.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X45 XM_017006762.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X46 XM_017006763.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X47 XM_017006764.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X49 XM_017006765.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X50 XM_017006766.1:c. N/A Upstream Transcript Variant
PBRM1 transcript variant X41 XM_017006758.1:c. N/A N/A
PBRM1 transcript variant X48 XR_001740194.1:n. N/A Upstream Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
Trans-Omics for Precision Medicine Global Study-wide 125568 A=0.47427 C=0.52573
The Exome Aggregation Consortium Global Study-wide 118626 A=0.50712 C=0.49288
The Exome Aggregation Consortium Europe Sub 71394 A=0.4841 C=0.5159
The Exome Aggregation Consortium Asian Sub 24934 A=0.6535 C=0.3465
The Exome Aggregation Consortium American Sub 11372 A=0.3797 C=0.6203
The Exome Aggregation Consortium African Sub 10050 A=0.4526 C=0.5474
The Exome Aggregation Consortium Other Sub 876 A=0.49 C=0.51
The Genome Aggregation Database Global Study-wide 30788 A=0.4899 C=0.5101
The Genome Aggregation Database European Sub 18386 A=0.5034 C=0.4966
The Genome Aggregation Database African Sub 8676 A=0.453 C=0.547
The Genome Aggregation Database East Asian Sub 1612 A=0.566 C=0.434
The Genome Aggregation Database Other Sub 978 A=0.51 C=0.49
The Genome Aggregation Database American Sub 834 A=0.40 C=0.60
The Genome Aggregation Database Ashkenazi Jewish Sub 302 A=0.49 C=0.51
GO Exome Sequencing Project Global Study-wide 13006 A=0.4791 C=0.5209
GO Exome Sequencing Project European American Sub 8600 A=0.488 C=0.512
GO Exome Sequencing Project African American Sub 4406 A=0.462 C=0.538
1000Genomes Global Study-wide 5008 A=0.510 C=0.490
1000Genomes African Sub 1322 A=0.427 C=0.573
1000Genomes East Asian Sub 1008 A=0.547 C=0.453
1000Genomes Europe Sub 1006 A=0.479 C=0.521
1000Genomes South Asian Sub 978 A=0.70 C=0.30
1000Genomes American Sub 694 A=0.39 C=0.61
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 A=0.506 C=0.494
UK 10K study - Twins TWIN COHORT Study-wide 3708 A=0.506 C=0.494
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement A= C G T Note
GRCh38.p7 chr 3 NC_000003.12:...

NC_000003.12:g.52686064A=

NC_000003.12:...

NC_000003.12:g.52686064A>C

NC_000003.12:...

NC_000003.12:g.52686064A>G

NC_000003.12:...

NC_000003.12:g.52686064A>T

GRCh37.p13 chr 3 NC_000003.11:...

NC_000003.11:g.52720080A=

NC_000003.11:...

NC_000003.11:g.52720080A>C

NC_000003.11:...

NC_000003.11:g.52720080A>G

NC_000003.11:...

NC_000003.11:g.52720080A>T

PBRM1 RefSeqGene NG_032108.1:g...

NG_032108.1:g.4787T=

NG_032108.1:g...

NG_032108.1:g.4787T>G

NG_032108.1:g...

NG_032108.1:g.4787T>C

NG_032108.1:g...

NG_032108.1:g.4787T>A

GNL3 RefSeqGene NG_027871.1:g...

NG_027871.1:g.5145A=

NG_027871.1:g...

NG_027871.1:g.5145A>C

NG_027871.1:g...

NG_027871.1:g.5145A>G

NG_027871.1:g...

NG_027871.1:g.5145A>T

GNL3 transcript variant 1 NM_014366.4:c...

NM_014366.4:c.-29A=

NM_014366.4:c...

NM_014366.4:c.-29A>C

NM_014366.4:c...

NM_014366.4:c.-29A>G

NM_014366.4:c...

NM_014366.4:c.-29A>T

GNL3 transcript variant 2 NM_206825.1:c...

NM_206825.1:c.-162A=

NM_206825.1:c...

NM_206825.1:c.-162A>C

NM_206825.1:c...

NM_206825.1:c.-162A>G

NM_206825.1:c...

NM_206825.1:c.-162A>T

Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

106 SubSNP, 8 Frequency submissions
No Submitter Submission ID Date (Build)
1 TSC-CSHL ss1306064 Oct 13, 2000 (86)
2 YUSUKE ss3230677 Sep 28, 2001 (101)
3 BCM_SSAHASNP ss10025854 Jul 11, 2003 (116)
4 SSAHASNP ss21963063 Apr 05, 2004 (121)
5 ABI ss44382884 Mar 14, 2006 (126)
6 ILLUMINA ss65736793 Oct 16, 2006 (127)
7 ILLUMINA ss66572078 Dec 01, 2006 (127)
8 ILLUMINA ss66919916 Dec 01, 2006 (127)
9 ILLUMINA ss67063650 Dec 01, 2006 (127)
10 PERLEGEN ss68861084 May 17, 2007 (127)
11 ILLUMINA ss70388889 May 17, 2007 (127)
12 ILLUMINA ss70517727 May 23, 2008 (130)
13 ILLUMINA ss71046211 May 17, 2007 (127)
14 ILLUMINA ss74912756 Dec 06, 2007 (129)
15 KRIBB_YJKIM ss83681893 Dec 14, 2007 (130)
16 HUMANGENOME_JCVI ss99092339 Feb 04, 2009 (130)
17 BGI ss106259811 Feb 13, 2009 (130)
18 ILLUMINA-UK ss117081160 Feb 14, 2009 (130)
19 ILLUMINA ss121441817 Dec 01, 2009 (131)
20 ENSEMBL ss135307168 Dec 01, 2009 (131)
21 ILLUMINA ss152927557 Dec 01, 2009 (131)
22 ILLUMINA ss159163349 Dec 01, 2009 (131)
23 ILLUMINA ss159956779 Dec 01, 2009 (131)
24 COMPLETE_GENOMICS ss162125843 Jul 04, 2010 (132)
25 COMPLETE_GENOMICS ss163406366 Jul 04, 2010 (132)
26 COMPLETE_GENOMICS ss166539405 Jul 04, 2010 (132)
27 ILLUMINA ss169778112 Jul 04, 2010 (132)
28 ILLUMINA ss171013714 Jul 04, 2010 (132)
29 BUSHMAN ss202511283 Jul 04, 2010 (132)
30 BCM-HGSC-SUB ss206173348 Jul 04, 2010 (132)
31 1000GENOMES ss211181862 Jul 14, 2010 (132)
32 1000GENOMES ss220132640 Jul 14, 2010 (132)
33 1000GENOMES ss231817548 Jul 14, 2010 (132)
34 1000GENOMES ss239231989 Jul 15, 2010 (132)
35 BL ss253087142 May 09, 2011 (134)
36 GMI ss277122427 May 04, 2012 (137)
37 PJP ss292794567 May 09, 2011 (134)
38 ILLUMINA ss410891688 Sep 17, 2011 (135)
39 ILLUMINA ss479458865 May 04, 2012 (137)
40 ILLUMINA ss479462726 May 04, 2012 (137)
41 ILLUMINA ss479893087 Sep 08, 2015 (146)
42 ILLUMINA ss484529133 May 04, 2012 (137)
43 1000GENOMES ss489881646 May 04, 2012 (137)
44 CLINSEQ_SNP ss491835844 May 04, 2012 (137)
45 ILLUMINA ss536672788 Sep 08, 2015 (146)
46 TISHKOFF ss556609138 Apr 25, 2013 (138)
47 SSMP ss650287286 Apr 25, 2013 (138)
48 NHLBI-ESP ss712530004 Apr 25, 2013 (138)
49 ILLUMINA ss778751924 Sep 08, 2015 (146)
50 ILLUMINA ss782711181 Sep 08, 2015 (146)
51 ILLUMINA ss783678963 Sep 08, 2015 (146)
52 ILLUMINA ss825358284 Apr 01, 2015 (144)
53 ILLUMINA ss831962521 Sep 08, 2015 (146)
54 ILLUMINA ss834211597 Sep 08, 2015 (146)
55 JMKIDD_LAB ss974448381 Aug 21, 2014 (142)
56 EVA-GONL ss978583041 Aug 21, 2014 (142)
57 JMKIDD_LAB ss1067451814 Aug 21, 2014 (142)
58 JMKIDD_LAB ss1070401405 Aug 21, 2014 (142)
59 1000GENOMES ss1303976432 Aug 21, 2014 (142)
60 DDI ss1429417177 Apr 01, 2015 (144)
61 EVA_GENOME_DK ss1579959284 Apr 01, 2015 (144)
62 EVA_FINRISK ss1584028169 Apr 01, 2015 (144)
63 EVA_DECODE ss1588054244 Apr 01, 2015 (144)
64 EVA_UK10K_ALSPAC ss1607053991 Apr 01, 2015 (144)
65 EVA_UK10K_TWINSUK ss1650048024 Apr 01, 2015 (144)
66 EVA_EXAC ss1687051701 Apr 01, 2015 (144)
67 EVA_MGP ss1711019233 Apr 01, 2015 (144)
68 EVA_SVP ss1712574932 Apr 01, 2015 (144)
69 ILLUMINA ss1752474970 Sep 08, 2015 (146)
70 HAMMER_LAB ss1799266397 Sep 08, 2015 (146)
71 WEILL_CORNELL_DGM ss1921822943 Feb 12, 2016 (147)
72 ILLUMINA ss1946083855 Feb 12, 2016 (147)
73 ILLUMINA ss1958564732 Feb 12, 2016 (147)
74 GENOMED ss1969389910 Jul 19, 2016 (147)
75 JJLAB ss2021470662 Sep 14, 2016 (149)
76 USC_VALOUEV ss2149544167 Dec 20, 2016 (150)
77 HUMAN_LONGEVITY ss2251524404 Dec 20, 2016 (150)
78 SYSTEMSBIOZJU ss2625233608 Nov 08, 2017 (151)
79 ILLUMINA ss2633948053 Nov 08, 2017 (151)
80 ILLUMINA ss2633948054 Nov 08, 2017 (151)
81 GRF ss2704917243 Nov 08, 2017 (151)
82 ILLUMINA ss2710972474 Nov 08, 2017 (151)
83 GNOMAD ss2733823753 Nov 08, 2017 (151)
84 GNOMAD ss2747028020 Nov 08, 2017 (151)
85 GNOMAD ss2792900051 Nov 08, 2017 (151)
86 AFFY ss2985877016 Nov 08, 2017 (151)
87 SWEGEN ss2992304313 Nov 08, 2017 (151)
88 ILLUMINA ss3022240635 Nov 08, 2017 (151)
89 BIOINF_KMB_FNS_UNIBA ss3024496693 Nov 08, 2017 (151)
90 CSHL ss3345014394 Nov 08, 2017 (151)
91 TOPMED ss3390427938 Nov 08, 2017 (151)
92 TOPMED ss3390427939 Nov 08, 2017 (151)
93 ILLUMINA ss3625815786 Jul 20, 2018 (151)
94 ILLUMINA ss3628659201 Jul 20, 2018 (151)
95 ILLUMINA ss3631894237 Jul 20, 2018 (151)
96 ILLUMINA ss3634008814 Jul 20, 2018 (151)
97 ILLUMINA ss3634895381 Jul 20, 2018 (151)
98 ILLUMINA ss3635692769 Jul 20, 2018 (151)
99 ILLUMINA ss3636590330 Jul 20, 2018 (151)
100 ILLUMINA ss3637445129 Jul 20, 2018 (151)
101 ILLUMINA ss3638414600 Jul 20, 2018 (151)
102 ILLUMINA ss3639209878 Jul 20, 2018 (151)
103 ILLUMINA ss3639622895 Jul 20, 2018 (151)
104 ILLUMINA ss3640602682 Jul 20, 2018 (151)
105 ILLUMINA ss3643371660 Jul 20, 2018 (151)
106 ILLUMINA ss3644816429 Jul 20, 2018 (151)
107 1000Genomes NC_000003.11 - 52720080 Jul 20, 2018 (151)
108 The Avon Longitudinal Study of Parents and Children NC_000003.11 - 52720080 Jul 20, 2018 (151)
109 The Exome Aggregation Consortium NC_000003.11 - 52720080 Jul 20, 2018 (151)
110 The Genome Aggregation Database NC_000003.11 - 52720080 Jul 20, 2018 (151)
111 The Genome Aggregation Database NC_000003.11 - 52720080 Jul 20, 2018 (151)
112 GO Exome Sequencing Project NC_000003.11 - 52720080 Jul 20, 2018 (151)
113 Trans-Omics for Precision Medicine NC_000003.12 - 52686064 Jul 20, 2018 (151)
114 UK 10K study - Twins NC_000003.11 - 52720080 Jul 20, 2018 (151)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs2289248 Nov 05, 2001 (101)
rs57612090 May 23, 2008 (130)
Added to this RefSNP Cluster:
Submission ids Observation SPDI Canonical SPDI Source RSIDs
ss3639209878, ss3639622895 NC_000003.9:52695119:A= NC_000003.12:52686063:A=
ss117081160, ss162125843, ss163406366, ss166539405, ss202511283, ss206173348, ss211181862, ss253087142, ss277122427, ss292794567, ss479458865, ss491835844, ss825358284, ss1588054244, ss1712574932, ss3643371660 NC_000003.10:52695119:A= NC_000003.12:52686063:A= (self)
15163454, 8432498, 6978869, 6978871, 133527805, 2838488, 381264, 8432498, ss220132640, ss231817548, ss239231989, ss479462726, ss479893087, ss484529133, ss489881646, ss536672788, ss556609138, ss650287286, ss712530004, ss778751924, ss782711181, ss783678963, ss831962521, ss834211597, ss974448381, ss978583041, ss1067451814, ss1070401405, ss1303976432, ss1429417177, ss1579959284, ss1584028169, ss1607053991, ss1650048024, ss1687051701, ss1711019233, ss1711726192, ss1752474970, ss1799266397, ss1921822943, ss1946083855, ss1958564732, ss1969389910, ss2021470662, ss2149544167, ss2625233608, ss2633948053, ss2633948054, ss2704917243, ss2710972474, ss2733823753, ss2747028020, ss2792900051, ss2985877016, ss2992304313, ss3022240635, ss3345014394, ss3625815786, ss3628659201, ss3631894237, ss3634008814, ss3634895381, ss3635692769, ss3636590330, ss3637445129, ss3638414600, ss3640602682, ss3644816429 NC_000003.11:52720079:A= NC_000003.12:52686063:A= (self) , rs772514571
251108322, ss2251524404, ss3024496693, ss3390427938, ss3390427939 NC_000003.12:52686063:A= NC_000003.12:52686063:A= (self)
ss10025854 NT_005999.15:1657888:A= NC_000003.12:52686063:A= (self)
ss21963063 NT_022517.16:52642427:A= NC_000003.12:52686063:A= (self)
ss1306064, ss3230677, ss44382884, ss65736793, ss66572078, ss66919916, ss67063650, ss68861084, ss70388889, ss70517727, ss71046211, ss74912756, ss83681893, ss99092339, ss106259811, ss121441817, ss135307168, ss152927557, ss159163349, ss159956779, ss169778112, ss171013714, ss410891688 NT_022517.18:52660079:A= NC_000003.12:52686063:A= (self)
ss3639209878, ss3639622895 NC_000003.9:52695119:A>C NC_000003.12:52686063:A>C
ss117081160, ss162125843, ss163406366, ss166539405, ss202511283, ss206173348, ss211181862, ss253087142, ss277122427, ss292794567, ss479458865, ss491835844, ss825358284, ss1588054244, ss1712574932, ss3643371660 NC_000003.10:52695119:A>C NC_000003.12:52686063:A>C (self)
15163454, 8432498, 6978871, 133527805, 2838488, 381264, 8432498, ss220132640, ss231817548, ss239231989, ss479462726, ss479893087, ss484529133, ss489881646, ss536672788, ss556609138, ss650287286, ss712530004, ss778751924, ss782711181, ss783678963, ss831962521, ss834211597, ss974448381, ss978583041, ss1067451814, ss1070401405, ss1303976432, ss1429417177, ss1579959284, ss1584028169, ss1607053991, ss1650048024, ss1687051701, ss1711019233, ss1752474970, ss1799266397, ss1921822943, ss1946083855, ss1958564732, ss1969389910, ss2021470662, ss2149544167, ss2625233608, ss2633948053, ss2633948054, ss2704917243, ss2710972474, ss2733823753, ss2747028020, ss2792900051, ss2985877016, ss2992304313, ss3022240635, ss3345014394, ss3625815786, ss3628659201, ss3631894237, ss3634008814, ss3634895381, ss3635692769, ss3636590330, ss3637445129, ss3638414600, ss3640602682, ss3644816429 NC_000003.11:52720079:A>C NC_000003.12:52686063:A>C (self)
251108322, ss2251524404, ss3024496693, ss3390427938 NC_000003.12:52686063:A>C NC_000003.12:52686063:A>C (self)
ss10025854 NT_005999.15:1657888:A>C NC_000003.12:52686063:A>C (self)
ss21963063 NT_022517.16:52642427:A>C NC_000003.12:52686063:A>C (self)
ss1306064, ss3230677, ss44382884, ss65736793, ss66572078, ss66919916, ss67063650, ss68861084, ss70388889, ss70517727, ss71046211, ss74912756, ss83681893, ss99092339, ss106259811, ss121441817, ss135307168, ss152927557, ss159163349, ss159956779, ss169778112, ss171013714, ss410891688 NT_022517.18:52660079:A>C NC_000003.12:52686063:A>C (self)
2838488, ss2733823753 NC_000003.11:52720079:A>G NC_000003.12:52686063:A>G (self)
2838488, ss2733823753 NC_000003.11:52720079:A>T NC_000003.12:52686063:A>T (self)
ss3390427939 NC_000003.12:52686063:A>T NC_000003.12:52686063:A>T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

4 citations for rs1108842
PMID Title Author Year Journal
19372376 Upstream open reading frames cause widespread reduction of protein expression and are polymorphic among humans. Calvo SE et al. 2009 Proceedings of the National Academy of Sciences of the United States of America
22479202 Novel loci for adiponectin levels and their influence on type 2 diabetes and metabolic traits: a multi-ethnic meta-analysis of 45,891 individuals. Dastani Z et al. 2012 PLoS genetics
26446360 Mendelian randomization studies of biomarkers and type 2 diabetes. Abbasi A et al. 2015 Endocrine connections
27252388 Role of Adiponectin in Coronary Heart Disease Risk: A Mendelian Randomization Study. Borges MC et al. 2016 Circulation research

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 0.1.4.post833+d3ba21e