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  1. Imasaki T, Wenzel S, Yamada K, Bryant ML, Takagi Y. Titer estimation for quality control (TEQC) method: A practical approach for optimal production of protein complexes using the baculovirus expression vector system. PLoS One. 2018;13(4):e0195356. doi: 10.1371/journal.pone.0195356. eCollection 2018. PubMed PMID: 29614134; PubMed Central PMCID: PMC5882171.
  2. Rogers CM, Wang JC, Noguchi H, Imasaki T, Takagi Y, Bochman ML. Yeast Hrq1 shares structural and functional homology with the disease-linked human RecQ4 helicase. Nucleic Acids Res. 2017 May 19;45(9):5217-5230. doi: 10.1093/nar/gkx151. PubMed PMID: 28334827; PubMed Central PMCID: PMC5605238.
  3. Meyer PA, Li S, Zhang M, Yamada K, Takagi Y, Hartzog GA, Fu J. Structures and Functions of the Multiple KOW Domains of Transcription Elongation Factor Spt5. Mol Cell Biol. 2015 Oct;35(19):3354-69. doi: 10.1128/MCB.00520-15. Epub 2015 Jul 27. PubMed PMID: 26217010; PubMed Central PMCID: PMC4561723.
  4. Khanna M, Imasaki T, Chikwana VM, Perez-Miller S, Hunter GO, Mosley A, Takagi Y, Hurley TD. Expression and purification of functional human glycogen synthase-1 (hGYS1) in insect cells. Protein Expr Purif. 2013 Aug;90(2):78-83. doi: 10.1016/j.pep.2013.05.007. Epub 2013 May 24. PubMed PMID: 23711380; PubMed Central PMCID: PMC3720772.
  5. Barford D, Takagi Y, Schultz P, Berger I. Baculovirus expression: tackling the complexity challenge. Curr Opin Struct Biol. 2013 Jun;23(3):357-64. doi: 10.1016/j.sbi.2013.03.009. Epub 2013 Apr 27. Review. PubMed PMID: 23628287.
  6. Trowitzsch S, Palmberger D, Fitzgerald D, Takagi Y, Berger I. MultiBac complexomics. Expert Rev Proteomics. 2012 Aug;9(4):363-73. doi: 10.1586/epr.12.32. PubMed PMID: 22967074.
  7. Cai G, Chaban YL, Imasaki T, Kovacs JA, Calero G, Penczek PA, Takagi Y, Asturias FJ. Interaction of the mediator head module with RNA polymerase II. Structure. 2012 May 9;20(5):899-910. doi: 10.1016/j.str.2012.02.023. PubMed PMID: 22579255; PubMed Central PMCID: PMC3383055.
  8. Bieniossek C, Imasaki T, Takagi Y, Berger I. MultiBac: expanding the research toolbox for multiprotein complexes. Trends Biochem Sci. 2012 Feb;37(2):49-57. doi: 10.1016/j.tibs.2011.10.005. Epub 2011 Dec 7. Review. PubMed PMID: 22154230.
  9. Yu X, Chen M, Zhang S, Yu ZH, Sun JP, Wang L, Liu S, Imasaki T, Takagi Y, Zhang ZY. Substrate specificity of lymphoid-specific tyrosine phosphatase (Lyp) and identification of Src kinase-associated protein of 55 kDa homolog (SKAP-HOM) as a Lyp substrate. J Biol Chem. 2011 Sep 2;286(35):30526-34. doi: 10.1074/jbc.M111.254722. Epub 2011 Jun 30. PubMed PMID: 21719704; PubMed Central PMCID: PMC3162412.
  10. Imasaki T, Calero G, Cai G, Tsai KL, Yamada K, Cardelli F, Erdjument-Bromage H, Tempst P, Berger I, Kornberg GL, Asturias FJ, Kornberg RD, Takagi Y. Architecture of the Mediator head module. Nature. 2011 Jul 3;475(7355):240-3. doi: 10.1038/nature10162. PubMed PMID: 21725323; PubMed Central PMCID: PMC4109712.
  11. Cai G, Imasaki T, Yamada K, Cardelli F, Takagi Y, Asturias FJ. Mediator head module structure and functional interactions. Nat Struct Mol Biol. 2010 Mar;17(3):273-9. doi: 10.1038/nsmb.1757. Epub 2010 Feb 14. PubMed PMID: 20154708; PubMed Central PMCID: PMC2925518.
  12. Cai G, Imasaki T, Takagi Y, Asturias FJ. Mediator structural conservation and implications for the regulation mechanism. Structure. 2009 Apr 15;17(4):559-67. doi: 10.1016/j.str.2009.01.016. PubMed PMID: 19368889; PubMed Central PMCID: PMC2673807.
  13. Takagi Y, Calero G, Komori H, Brown JA, Ehrensberger AH, Hudmon A, Asturias F, Kornberg RD. Head module control of mediator interactions. Mol Cell. 2006 Aug 4;23(3):355-64. doi: 10.1016/j.molcel.2006.06.007. PubMed PMID: 16885025.
  14. Takagi Y, Kornberg RD. Mediator as a general transcription factor. J Biol Chem. 2006 Jan 6;281(1):80-9. doi: 10.1074/jbc.M508253200. Epub 2005 Nov 1. PubMed PMID: 16263706.
  15. Takagi Y, Masuda CA, Chang WH, Komori H, Wang D, Hunter T, Joazeiro CA, Kornberg RD. Ubiquitin ligase activity of TFIIH and the transcriptional response to DNA damage. Mol Cell. 2005 Apr 15;18(2):237-43. doi: 10.1016/j.molcel.2005.03.007. PubMed PMID: 15837426.
  16. Takagi Y, Komori H, Chang WH, Hudmon A, Erdjument-Bromage H, Tempst P, Kornberg RD. Revised subunit structure of yeast transcription factor IIH (TFIIH) and reconciliation with human TFIIH. J Biol Chem. 2003 Nov 7;278(45):43897-900. doi: 10.1074/jbc.C300417200. Epub 2003 Sep 18. PubMed PMID: 14500720.
  17. Davis JA, Takagi Y, Kornberg RD, Asturias FA. Structure of the yeast RNA polymerase II holoenzyme: Mediator conformation and polymerase interaction. Mol Cell. 2002 Aug;10(2):409-15. PubMed PMID: 12191485.
  18. Li Y, Takagi Y, Jiang Y, Tokunaga M, Erdjument-Bromage H, Tempst P, Kornberg RD. A multiprotein complex that interacts with RNA polymerase II elongator. J Biol Chem. 2001 Aug 10;276(32):29628-31. doi: 10.1074/jbc.C100274200. Epub 2001 Jun 4. PubMed PMID: 11390369.
  19. Ohh M, Takagi Y, Aso T, Stebbins CE, Pavletich NP, Zbar B, Conaway RC, Conaway JW, Kaelin WG Jr. Synthetic peptides define critical contacts between elongin C, elongin B, and the von Hippel-Lindau protein. J Clin Invest. 1999 Dec;104(11):1583-91. doi: 10.1172/JCI8161. PubMed PMID: 10587522; PubMed Central PMCID: PMC481054.
  20. Brower CS, Shilatifard A, Mather T, Kamura T, Takagi Y, Haque D, Treharne A, Foundling SI, Conaway JW, Conaway RC. The elongin B ubiquitin homology domain. Identification of Elongin B sequences important for interaction with Elongin C. J Biol Chem. 1999 May 7;274(19):13629-36. doi: 10.1074/jbc.274.19.13629. PubMed PMID: 10224134.
  21. Takagi Y, Pause A, Conaway RC, Conaway JW. Identification of elongin C sequences required for interaction with the von Hippel-Lindau tumor suppressor protein. J Biol Chem. 1997 Oct 24;272(43):27444-9. doi: 10.1074/jbc.272.43.27444. PubMed PMID: 9341197.
  22. Takagi Y, Conaway RC, Conaway JW. Characterization of elongin C functional domains required for interaction with elongin B and activation of elongin A. J Biol Chem. 1996 Oct 11;271(41):25562-8. doi: 10.1074/jbc.271.41.25562. PubMed PMID: 8810329.
  23. Matsumoto H, Kurien BT, Takagi Y, Kahn ES, Kinumi T, Komori N, Yamada T, Hayashi F, Isono K, Pak WL. Phosrestin I undergoes the earliest light-induced phosphorylation by a calcium/calmodulin-dependent protein kinase in Drosophila photoreceptors. Neuron. 1994 May;12(5):997-1010. PubMed PMID: 8185954.
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