My Bibliography

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Yan W. Calicin is a key sperm head-shaping factor essential for male fertility. Sci Bull (Beijing). 2022 Dec 15;67(23):2395-2397. doi: 10.1016/j.scib.2022.11.022. Epub 2022 Nov 19. PubMed PMID: 36566059; PubMed Central PMCID: PMC10019501.

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Escher J, Yan W, Rissman EF, Wang HV, Hernandez A, Corces VG. Beyond Genes: Germline Disruption in the Etiology of Autism Spectrum Disorders. J Autism Dev Disord. 2022 Oct;52(10):4608-4624. doi: 10.1007/s10803-021-05304-1. Epub 2021 Oct 1. PubMed PMID: 34596807; PubMed Central PMCID: PMC9035896.

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Yan W, Bartolomei MS. Hyperglycemia-induced TET3 insufficiency is responsible for maternal transmission of glucose intolerance†. Biol Reprod. 2022 Sep 12;107(3):676-678. doi: 10.1093/biolre/ioac115. PubMed PMID: 35640226; PubMed Central PMCID: PMC9476213.

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Guo M, Luo C, Wang Z, Chen S, Morris D, Ruan F, Chen Z, Yang L, Wei X, Wu C, Luo B, Lv Z, Huang J, Zhang D, Yu C, Gao Q, Wang H, Zhang Y, Sun F, Yan W, Tang C. Uncoupling transcription and translation through miRNA-dependent poly(A) length control in haploid male germ cells. Development. 2022 Jun 15;149(12). doi: 10.1242/dev.199573. Epub 2022 Jun 16. PubMed PMID: 35588208; PubMed Central PMCID: PMC9270972.

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Wang Z, Meng N, Wang Y, Zhou T, Li M, Wang S, Chen S, Zheng H, Kong S, Wang H, Yan W. Ablation of the miR-465 Cluster Causes a Skewed Sex Ratio in Mice. Front Endocrinol (Lausanne). 2022;13:893854. doi: 10.3389/fendo.2022.893854. eCollection 2022. PubMed PMID: 35677715; PubMed Central PMCID: PMC9167928.

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Wang H, Liu J, Gao J, Yan W, Rehan VK. Perinatal Exposure to Nicotine Alters Sperm RNA Profiles in Rats. Front Endocrinol (Lausanne). 2022;13:893863. doi: 10.3389/fendo.2022.893863. eCollection 2022. PubMed PMID: 35600600; PubMed Central PMCID: PMC9114732.

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Casaburi R, Merrill DD, Harding G, Leidy NK, Rossiter HB, Tal-Singer R, Hamilton A. A Conceptual Framework for Use of Increased Endurance Time During Constant Work Rate Cycle Ergometry as a Patient-Focused Meaningful Outcome in COPD Clinical Trials. Chronic Obstr Pulm Dis. 2022 Apr 29;9(2):252-265. doi: 10.15326/jcopdf.2021.0258. Review. PubMed PMID: 35018752; PubMed Central PMCID: PMC9166337.

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Mason SE, Moreta-Martinez R, Labaki WW, Strand MJ, Regan EA, Bon J, San Jose Estepar R, Casaburi R, McDonald ML, Rossiter HB, Make B, Dransfield MT, Han MK, Young K, Curtis JL, Stringer K, Kinney G, Hokanson JE, San Jose Estepar R, Washko GR. Longitudinal Association Between Muscle Loss and Mortality in Ever Smokers. Chest. 2022 Apr;161(4):960-970. doi: 10.1016/j.chest.2021.10.047. Epub 2021 Nov 14. PubMed PMID: 34785234; PubMed Central PMCID: PMC9005860.

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Wang C, Mbizvo M, Festin MP, Björndahl L, Toskin I. Evolution of the WHO "Semen" processing manual from the first (1980) to the sixth edition (2021). Fertil Steril. 2022 Feb;117(2):237-245. doi: 10.1016/j.fertnstert.2021.11.037. Epub 2022 Jan 5. Review. PubMed PMID: 34996596; PubMed Central PMCID: PMC8842884.

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Barratt CLR, Wang C, Baldi E, Toskin I, Kiarie J, Lamb DJ. What advances may the future bring to the diagnosis, treatment, and care of male sexual and reproductive health?. Fertil Steril. 2022 Feb;117(2):258-267. doi: 10.1016/j.fertnstert.2021.12.013. Review. PubMed PMID: 35125173; PubMed Central PMCID: PMC8877074.

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Ward SM, Hwang SJ, Yan W, Offermanns S, Sanders KM. Intrinsic pacemaker activity and propulsive forces provided by the myosalpinx are necessary for egg and embryo transport in the oviduct. Biol Reprod. 2022 Jan 13;106(1):4-5. doi: 10.1093/biolre/ioab209. PubMed PMID: 34747998; PubMed Central PMCID: PMC9989328.

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Demeyer H, Mohan D, Burtin C, Vaes AW, Heasley M, Bowler RP, Casaburi R, Cooper CB, Corriol-Rohou S, Frei A, Hamilton A, Hopkinson NS, Karlsson N, Man WD, Moy ML, Pitta F, Polkey MI, Puhan M, Rennard SI, Rochester CL, Rossiter HB, Sciurba F, Singh S, Tal-Singer R, Vogiatzis I, Watz H, Lummel RV, Wyatt J, Merrill DD, Spruit MA, Garcia-Aymerich J, Troosters T. Objectively Measured Physical Activity in Patients with COPD: Recommendations from an International Task Force on Physical Activity. Chronic Obstr Pulm Dis. 2021 Oct 28;8(4):528-550. doi: 10.15326/jcopdf.2021.0213. PubMed PMID: 34433239; PubMed Central PMCID: PMC8686852.

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Goulding RP, Rossiter HB, Marwood S, Ferguson C. Bioenergetic Mechanisms Linking V˙O2 Kinetics and Exercise Tolerance. Exerc Sport Sci Rev. 2021 Oct 1;49(4):274-283. doi: 10.1249/JES.0000000000000267. PubMed PMID: 34547760; PubMed Central PMCID: PMC8528340.

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Escher J, Corces V, Mansuy I, Yan W. Exploring the role of nongenetic inheritance in the etiology of human disease. Biol Reprod. 2021 Sep 14;105(3):567-569. doi: 10.1093/biolre/ioab151. PubMed PMID: 34373898; PubMed Central PMCID: PMC8921652.

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Yu T, Xie Y, Tang C, Wang Y, Yuan S, Zheng H, Yan W. Dnmt2-null sperm block maternal transmission of a paramutant phenotype†. Biol Reprod. 2021 Sep 14;105(3):603-612. doi: 10.1093/biolre/ioab086. PubMed PMID: 33929014; PubMed Central PMCID: PMC8444667.

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Zhao D, Abbasi A, Casaburi R, Adami A, Tiller NB, Yuan W, Yee C, Jendzjowsky NG, MacDonald DM, Kunisaki KM, Stringer WW, Porszasz J, Make BJ, Bowler RP, Rossiter HB. Identifying a Heart Rate Recovery Criterion After a 6-Minute Walk Test in COPD. Int J Chron Obstruct Pulmon Dis. 2021;16:2545-2560. doi: 10.2147/COPD.S311572. eCollection 2021. PubMed PMID: 34511898; PubMed Central PMCID: PMC8427685.

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Visavadiya NP, Rossiter HB, Khamoui AV. Distinct glycolytic pathway regulation in liver, tumour and skeletal muscle of mice with cancer cachexia. Cell Biochem Funct. 2021 Aug;39(6):802-812. doi: 10.1002/cbf.3652. Epub 2021 Jun 15. PubMed PMID: 34129243; PubMed Central PMCID: PMC8355074.

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Tang C, Xie Y, Guo M, Yan W. AASRA: an anchor alignment-based small RNA annotation pipeline†. Biol Reprod. 2021 Jul 2;105(1):267-277. doi: 10.1093/biolre/ioab062. PubMed PMID: 33787835; PubMed Central PMCID: PMC8256102.

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Tiller NB, Cao M, Lin F, Yuan W, Wang CY, Abbasi A, Calmelat R, Soriano A, Rossiter HB, Casaburi R, Stringer WW, Porszasz J. Dynamic airway function during exercise in COPD assessed via impulse oscillometry before and after inhaled bronchodilators. J Appl Physiol (1985). 2021 Jul 1;131(1):326-338. doi: 10.1152/japplphysiol.00148.2021. Epub 2021 May 20. PubMed PMID: 34013748; PubMed Central PMCID: PMC8325613.

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Wang C, Yuen F, Swerdloff R. Extrahypothalamic ER Alpha Are Required for Testosterone Effects on Physical Activity and Fat Mass in Mice. Endocrinology. 2021 Jun 1;162(6). doi: 10.1210/endocr/bqab075. PubMed PMID: 33842977; PubMed Central PMCID: PMC9633325.

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Yuan S, Wang Z, Peng H, Ward SM, Hennig GW, Zheng H, Yan W. Oviductal motile cilia are essential for oocyte pickup but dispensable for sperm and embryo transport. Proc Natl Acad Sci U S A. 2021 Jun 1;118(22). doi: 10.1073/pnas.2102940118. PubMed PMID: 34039711; PubMed Central PMCID: PMC8179221.

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Wang Z, Chen S, Yan W. Both murine and human sperm contain intact large RNAs. Biol Reprod. 2021 Jun;104(6):1184-86. doi: 10.1093/biolre/ioab055. Epub 2021 Mar 31. PubMed PMID: 33787842; PubMed Central PMCID: PMC10148735.

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Suzuki S, McCarrey JR, Hermann BP. Differential RA responsiveness among subsets of mouse late progenitor spermatogonia. Reproduction. 2021 May 5;161(6):645-655. doi: 10.1530/REP-21-0031. PubMed PMID: 33835049; PubMed Central PMCID: PMC8105290.

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Chang Z, Qin W, Zheng H, Schegg K, Han L, Liu X, Wang Y, Wang Z, McSwiggin H, Peng H, Yuan S, Wu J, Wang Y, Zhu S, Jiang Y, Nie H, Tang Y, Zhou Y, Hitchcock MJM, Tang Y, Yan W. Triptonide is a reversible non-hormonal male contraceptive agent in mice and non-human primates. Nat Commun. 2021 Feb 23;12(1):1253. doi: 10.1038/s41467-021-21517-5. PubMed PMID: 33623031; PubMed Central PMCID: PMC7902613.

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Suzuki S, McCarrey JR, Hermann BP. An mTORC1-dependent switch orchestrates the transition between mouse spermatogonial stem cells and clones of progenitor spermatogonia. Cell Rep. 2021 Feb 16;34(7):108752. doi: 10.1016/j.celrep.2021.108752. PubMed PMID: 33596419; PubMed Central PMCID: PMC7980622.

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Wang Y, Yamauchi Y, Wang Z, Zheng H, Yanagimachi R, Ward MA, Yan W. Both Cauda and Caput Epididymal Sperm Are Capable of Supporting Full-Term Development in FVB and CD-1 Mice. Dev Cell. 2020 Dec 21;55(6):675-676. doi: 10.1016/j.devcel.2020.11.022. PubMed PMID: 33352141; PubMed Central PMCID: PMC7799177.

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Zhang X, Trebak F, Souza LAC, Shi J, Zhou T, Kehoe PG, Chen Q, Feng Earley Y. Small RNA modifications in Alzheimer's disease. Neurobiol Dis. 2020 Nov;145:105058. doi: 10.1016/j.nbd.2020.105058. Epub 2020 Aug 21. PubMed PMID: 32835860; PubMed Central PMCID: PMC7572745.

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Cheng K, Chen IC, Cheng CE, Mutoji K, Hale BJ, Hermann BP, Geyer CB, Oatley JM, McCarrey JR. Unique Epigenetic Programming Distinguishes Regenerative Spermatogonial Stem Cells in the Developing Mouse Testis. iScience. 2020 Oct 23;23(10):101596. doi: 10.1016/j.isci.2020.101596. eCollection 2020 Oct 23. PubMed PMID: 33083754; PubMed Central PMCID: PMC7552105.

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Bae B, Gruner HN, Lynch M, Feng T, So K, Oliver D, Mastick GS, Yan W, Pieraut S, Miura P. Elimination of Calm1 long 3'-UTR mRNA isoform by CRISPR-Cas9 gene editing impairs dorsal root ganglion development and hippocampal neuron activation in mice. RNA. 2020 Oct;26(10):1414-1430. doi: 10.1261/rna.076430.120. Epub 2020 Jun 10. PubMed PMID: 32522888; PubMed Central PMCID: PMC7491327.

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Lewon M, Wang Y, Peters C, Peterson M, Zheng H, Wang Z, Hayes L, Yan W. Assessment of operant learning and memory in mice born through ICSI. Hum Reprod. 2020 Sep 1;35(9):2058-2071. doi: 10.1093/humrep/deaa167. PubMed PMID: 32766772; PubMed Central PMCID: PMC7485617.

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Matzuk MM, Georg GI, Yan W. A special issue on contraceptive development: past, present, and future. Biol Reprod. 2020 Aug 4;103(2):145-146. doi: 10.1093/biolre/ioaa120. PubMed PMID: 32701150; PubMed Central PMCID: PMC7401340.

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Wang Z, Wang Y, Wang S, Gorzalski AJ, McSwiggin H, Yu T, Castaneda-Garcia K, Prince B, Wang H, Zheng H, Yan W. Efficient genome editing by CRISPR-Mb3Cas12a in mice. J Cell Sci. 2020 May 11;133(9). doi: 10.1242/jcs.240705. PubMed PMID: 32393674; PubMed Central PMCID: PMC7240296.

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Tang C, Xie Y, Yu T, Liu N, Wang Z, Woolsey RJ, Tang Y, Zhang X, Qin W, Zhang Y, Song G, Zheng W, Wang J, Chen W, Wei X, Xie Z, Klukovich R, Zheng H, Quilici DR, Yan W. m(6)A-dependent biogenesis of circular RNAs in male germ cells. Cell Res. 2020 Mar;30(3):211-228. doi: 10.1038/s41422-020-0279-8. Epub 2020 Feb 11. PubMed PMID: 32047269; PubMed Central PMCID: PMC7054367.

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Wang Z, Xie Y, Wang Y, Morris D, Wang S, Oliver D, Yuan S, Zayac K, Bloomquist S, Zheng H, Yan W. X-linked miR-506 family miRNAs promote FMRP expression in mouse spermatogonia. EMBO Rep. 2020 Jan 7;21(1):e49024. doi: 10.15252/embr.201949024. Epub 2019 Dec 6. PubMed PMID: 31808593; PubMed Central PMCID: PMC6944911.

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Wang HT, Tong X, Zhang ZX, Sun YY, Yan W, Xu ZM, Fu WN. MYCT1 represses apoptosis of laryngeal cancerous cells through the MAX/miR-181a/NPM1 pathway. FEBS J. 2019 Oct;286(19):3892-3908. doi: 10.1111/febs.14942. Epub 2019 Jun 13. PubMed PMID: 31152622.

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Yan W, Clarke H. New horizons in reproductive biology: a special issue. Biol Reprod. 2019 Sep 1;101(3):513. doi: 10.1093/biolre/ioz138. PubMed PMID: 31350845.

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Sadler-Riggleman I, Klukovich R, Nilsson E, Beck D, Xie Y, Yan W, Skinner MK. Epigenetic transgenerational inheritance of testis pathology and Sertoli cell epimutations: generational origins of male infertility. Environ Epigenet. 2019 Jul;5(3):dvz013. doi: 10.1093/eep/dvz013. eCollection 2019 Jul. PubMed PMID: 31528361; PubMed Central PMCID: PMC6736068.

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Wang Z, Yan W. Inflammation induced by faulty replication during embryonic development causes skewed sex ratio. Biol Reprod. 2019 Aug 1;101(2):259-261. doi: 10.1093/biolre/ioz104. PubMed PMID: 31189185; PubMed Central PMCID: PMC6736220.

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Wang Z, McSwiggin H, Newkirk SJ, Wang Y, Oliver D, Tang C, Lee S, Wang S, Yuan S, Zheng H, Ye P, An W, Yan W. Insertion of a chimeric retrotransposon sequence in mouse Axin1 locus causes metastable kinky tail phenotype. Mob DNA. 2019;10:17. doi: 10.1186/s13100-019-0162-7. eCollection 2019. PubMed PMID: 31073336; PubMed Central PMCID: PMC6500023.

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Yuan S, Liu Y, Peng H, Tang C, Hennig GW, Wang Z, Wang L, Yu T, Klukovich R, Zhang Y, Zheng H, Xu C, Wu J, Hess RA, Yan W. Motile cilia of the male reproductive system require miR-34/miR-449 for development and function to generate luminal turbulence. Proc Natl Acad Sci U S A. 2019 Feb 26;116(9):3584-3593. doi: 10.1073/pnas.1817018116. Epub 2019 Jan 18. PubMed PMID: 30659149; PubMed Central PMCID: PMC6397547.

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Klukovich R, Nilsson E, Sadler-Riggleman I, Beck D, Xie Y, Yan W, Skinner MK. Environmental Toxicant Induced Epigenetic Transgenerational Inheritance of Prostate Pathology and Stromal-Epithelial Cell Epigenome and Transcriptome Alterations: Ancestral Origins of Prostate Disease. Sci Rep. 2019 Feb 18;9(1):2209. doi: 10.1038/s41598-019-38741-1. PubMed PMID: 30778168; PubMed Central PMCID: PMC6379561.

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Nilsson E, Klukovich R, Sadler-Riggleman I, Beck D, Xie Y, Yan W, Skinner MK. Environmental toxicant induced epigenetic transgenerational inheritance of ovarian pathology and granulosa cell epigenome and transcriptome alterations: ancestral origins of polycystic ovarian syndrome and primary ovarian insufiency. Epigenetics. 2018;13(8):875-895. doi: 10.1080/15592294.2018.1521223. Epub 2018 Oct 2. PubMed PMID: 30207508; PubMed Central PMCID: PMC6224216.

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Wang Z, Lee S, Oliver D, Yuan S, Tang C, Wang Y, Zheng H, Yan W. Prps1l1, a testis-specific gene, is dispensable for mouse spermatogenesis. Mol Reprod Dev. 2018 Oct;85(10):802-804. doi: 10.1002/mrd.23053. Epub 2018 Sep 7. PubMed PMID: 30113107; PubMed Central PMCID: PMC6202250.

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Grozdanov PN, Li J, Yu P, Yan W, MacDonald CC. Cstf2t Regulates expression of histones and histone-like proteins in male germ cells. Andrology. 2018 Jul;6(4):605-615. doi: 10.1111/andr.12488. Epub 2018 Apr 19. PubMed PMID: 29673127; PubMed Central PMCID: PMC6105451.

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Zhang Y, Zhang X, Shi J, Tuorto F, Li X, Liu Y, Liebers R, Zhang L, Qu Y, Qian J, Pahima M, Liu Y, Yan M, Cao Z, Lei X, Cao Y, Peng H, Liu S, Wang Y, Zheng H, Woolsey R, Quilici D, Zhai Q, Li L, Zhou T, Yan W, Lyko F, Zhang Y, Zhou Q, Duan E, Chen Q. Dnmt2 mediates intergenerational transmission of paternally acquired metabolic disorders through sperm small non-coding RNAs. Nat Cell Biol. 2018 May;20(5):535-540. doi: 10.1038/s41556-018-0087-2. Epub 2018 Apr 25. PubMed PMID: 29695786; PubMed Central PMCID: PMC5926820.

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Barouki R, Melén E, Herceg Z, Beckers J, Chen J, Karagas M, Puga A, Xia Y, Chadwick L, Yan W, Audouze K, Slama R, Heindel J, Grandjean P, Kawamoto T, Nohara K. Epigenetics as a mechanism linking developmental exposures to long-term toxicity. Environ Int. 2018 May;114:77-86. doi: 10.1016/j.envint.2018.02.014. Epub 2018 Feb 27. Review. PubMed PMID: 29499450; PubMed Central PMCID: PMC5899930.

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Chuang TD, Xie Y, Yan W, Khorram O. Next-generation sequencing reveals differentially expressed small noncoding RNAs in uterine leiomyoma. Fertil Steril. 2018 May;109(5):919-929. doi: 10.1016/j.fertnstert.2018.01.034. PubMed PMID: 29778390; PubMed Central PMCID: PMC6445395.

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Ben Maamar M, Sadler-Riggleman I, Beck D, McBirney M, Nilsson E, Klukovich R, Xie Y, Tang C, Yan W, Skinner MK. Alterations in sperm DNA methylation, non-coding RNA expression, and histone retention mediate vinclozolin-induced epigenetic transgenerational inheritance of disease. Environ Epigenet. 2018 Apr;4(2):dvy010. doi: 10.1093/eep/dvy010. eCollection 2018 Apr. PubMed PMID: 29732173; PubMed Central PMCID: PMC5920293.

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Skinner MK, Ben Maamar M, Sadler-Riggleman I, Beck D, Nilsson E, McBirney M, Klukovich R, Xie Y, Tang C, Yan W. Alterations in sperm DNA methylation, non-coding RNA and histone retention associate with DDT-induced epigenetic transgenerational inheritance of disease. Epigenetics Chromatin. 2018 Feb 27;11(1):8. doi: 10.1186/s13072-018-0178-0. PubMed PMID: 29482626; PubMed Central PMCID: PMC5827984.

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Tang C, Klukovich R, Peng H, Wang Z, Yu T, Zhang Y, Zheng H, Klungland A, Yan W. ALKBH5-dependent m6A demethylation controls splicing and stability of long 3'-UTR mRNAs in male germ cells. Proc Natl Acad Sci U S A. 2018 Jan 9;115(2):E325-E333. doi: 10.1073/pnas.1717794115. Epub 2017 Dec 26. PubMed PMID: 29279410; PubMed Central PMCID: PMC5777073.