My Bibliography

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Sabo MC, Gharib SA, Shah JA, McClelland RS. Reply to Yu et al. J Infect Dis. 2025 Nov 14;232(5):e861. doi: 10.1093/infdis/jiaf283. PubMed PMID: 40444321; PubMed Central PMCID: PMC12614959.

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Tram TTB, Garner LC, Thai LNH, Nhat LTH, Thu DDA, Nghia HDT, Van LH, Thwaites GE, Ha VTN, Klenerman P, Thuong NTT. Single-cell profiling of blood and cerebrospinal fluid in tuberculous meningitis. J Immunol. 2025 Nov 1;214(11):2894-2905. doi: 10.1093/jimmun/vkaf186. PubMed PMID: 40795373; PubMed Central PMCID: PMC12646059.

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Fernandez MC, Peterson GJ, Le C, Skerrett SJ, Hawn TR. Interferon-γ Stimulation Fails to Restrict Mycobacterium tuberculosis Growth in Human Monocyte-Derived and Alveolar Macrophages. J Infect Dis. 2025 Sep 15;232(3):573-577. doi: 10.1093/infdis/jiaf220. PubMed PMID: 40285696; PubMed Central PMCID: PMC12455314.

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Gern BH, Klas JM, Foster KA, Kanagy ME, Cohen SB, Plumlee CR, Duffy FJ, Neal ML, Halima M, Gustin AT, Stull SM, Wilson JJ, Diercks AH, Aderem A, Gale M Jr, Aitchison JD, Gerner MY, Urdahl KB. Early and opposing neutrophil and CD4 T cell responses shape pulmonary tuberculosis pathology. J Exp Med. 2025 Oct 6;222(10). doi: 10.1084/jem.20250161. Epub 2025 Jul 30. PubMed PMID: 40736456; PubMed Central PMCID: PMC12309470.

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Qabar CM, Baidoo EEK, Akyuz Turumtay E, Qayum TM, Keasling JD, Madigan CA, Portnoy DA, Cox JS. The mevalonate pathway of isoprenoid biosynthesis supports metabolic flexibility in Mycobacterium marinum. bioRxiv. 2025 Jul 11;. doi: 10.1101/2025.07.11.664281. PubMed PMID: 40672248; PubMed Central PMCID: PMC12265665.

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Ivie JJ, Dill-McFarland KA, Simmons JD, Peterson GJ, Benchek PH, Mayanja-Kizza H, Veith LE, Agata M, Ha DT, Nghia HD, Boom WH, Stein CM, Khor CC, Thwaites GE, Hai HT, Thuong NT, Chang X, Dunstan SJ, Hawn TR. Myeloid cell genome-wide screen identifies variants associated with Mycobacterium tuberculosis-induced cytokine transcriptional responses. J Clin Invest. 2025 Jul 15;135(14). doi: 10.1172/JCI179822. eCollection 2025 Jul 15. PubMed PMID: 40402573; PubMed Central PMCID: PMC12259255.

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Qabar CM, Waldburger L, Keasling JD, Portnoy DA, Cox JS. Leveraging a synthetic biology approach to enhance BCG-mediated expansion of Vγ9Vδ2 T cells. bioRxiv. 2025 May 9;. doi: 10.1101/2025.05.05.651767. PubMed PMID: 40654943; PubMed Central PMCID: PMC12247912.

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Canalda-Baltrons A, Silcocks M, Hall MB, Theys D, Chang X, Viberg LT, Sherry NL, Coin L, Dunstan SJ. Genome graphs reveal the importance of structural variation in Mycobacterium tuberculosis evolution and drug resistance. bioRxiv. 2025 May 7;. doi: 10.1101/2025.05.07.652570. PubMed PMID: 40654946; PubMed Central PMCID: PMC12247764.

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Anterasian C, Gela A, Mwambene TD, Shah JA, Ivie J, Dill-McFarland KA, Hanekom WA, Kiritsy MC, Sassetti CM, Musvosvi M, Hatherill M, Scriba TJ, Hawn TR. BCG induced innate immune response heterogeneity and susceptibility to pediatric tuberculosis. J Immunol. 2025 May 1;214(5):936-946. doi: 10.1093/jimmun/vkae062. PubMed PMID: 40174917; PubMed Central PMCID: PMC12124979.

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Penã Avila J, Simmons J, Figueiredo MC, Turner M, Cordeiro-Santos M, Rolla VC, Kristki AL, Gangula R, Nochowicz C, Ram R, Bailin S, Mallal S, Gaudieri S, Alves E, Barreto-Duarte BB, Queiroz ATL, Nakaya HI, Andrade BB, Sterling TR, Kalams SA, RePORT-Brazil Consortium. Single-cell immune profiling at time of M. tuberculosis exposure reveals antigen-reactive programs that predict progression to active disease. medRxiv. 2025 Apr 30;. doi: 10.1101/2025.04.29.25326433. PubMed PMID: 40343021; PubMed Central PMCID: PMC12060959.

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Githua J, Mecha J, Stern J, Escudero JN, Njagi L, Kijaro L, Mirera J, Murithi W, John-Stewart G, Maleche-Obimbo E, Nduba V, LaCourse SM. C-reactive protein for pulmonary tuberculosis screening and treatment response monitoring in children. medRxiv. 2025 Apr 25;. doi: 10.1101/2025.04.24.25326338. PubMed PMID: 40313307; PubMed Central PMCID: PMC12045435.

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Chang X, Li Z, Khac Thai PV, Minh Ha DT, Thuong Thuong NT, Wee D, Binte Mohamed Subhan AS, Silcocks M, Eng Chee CB, Quynh Nhu NT, Heng CK, Teo YY, Singal A, Oehlers SH, Yuan JM, Koh WP, Caws M, Khor CC, Dorajoo R, Dunstan SJ. Genome-wide association study reveals a novel tuberculosis susceptibility locus in multiple East Asian and European populations. medRxiv. 2025 Apr 24;. doi: 10.1101/2024.03.14.24304327. PubMed PMID: 40313261; PubMed Central PMCID: PMC12045432.

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Dill-McFarland KA, Andrade BB, Figueiredo MC, Andrade AMS, Avendaño-Rangel F, Cordeiro-Santos M, Kritski AL, Rolla VC, Cubillos-Angulo JM, Kalams SA, Simmons JD, Oakes JM, Avila JP, Nakaya HI, Gangula RD, Rebeiro PF, Amorim G, Mallal SA, Regional Prospective Observational Research in Tuberculosis (RePORT)-Brazil Consortium, Sterling TR, Hawn TR. Genome-wide association study in Brazil identifies genetic susceptibility to tuberculosis with single-cell gene expression effects. medRxiv. 2025 Apr 7;. doi: 10.1101/2025.03.13.25323932. PubMed PMID: 40162286; PubMed Central PMCID: PMC11952600.

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Cox MS, Dill-McFarland KA, Simmons JD, Benchek P, Mayanja-Kizza H, Boom WH, Stein CM, Hawn TR. Multi-omic latent variable data integration reveals multicellular structure pathways associated with resistance to tuberculin skin test (TST)/interferon gamma release assay (IGRA) conversion in Uganda. BMC Genomics. 2025 Mar 18;26(1):265. doi: 10.1186/s12864-025-11407-1. PubMed PMID: 40102730; PubMed Central PMCID: PMC11916984.

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Dill-McFarland KA, Peterson G, Lim PN, Skerrett S, Hawn TR, Rothchild AC, Campo M. Shared and distinct responses of human and murine alveolar macrophages and monocyte-derived macrophages to Mycobacterium tuberculosis. bioRxiv. 2025 Mar 5;. doi: 10.1101/2025.02.28.640814. PubMed PMID: 40093075; PubMed Central PMCID: PMC11908159.

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Tram KH, Ong'ang'o J, Kiplimo R, Hawn TR, Nduba V, Horne DJ, Ross JM. Mobility patterns, activity locations, and TB in Nairobi, Kenya. Int J Tuberc Lung Dis. 2025 Mar 1;29(3):103-112. doi: 10.5588/ijtld.24.0372. PubMed PMID: 40052657; PubMed Central PMCID: PMC12611499.

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Ong'ang'o JR, Ross J, Kiplimo R, Kerama C, Tram KH, Zifodya JS, Mukiri N, Nyadimo E, Njoroge M, Ronoh A, Kathure I, Kirathe D, Hawn TR, Nduba V, Horne DJ. Persistently high TB prevalence in Nairobi County neighbourhoods, 2015-2022. PLOS Glob Public Health. 2025;5(2):e0003849. doi: 10.1371/journal.pgph.0003849. eCollection 2025. PubMed PMID: 39965017; PubMed Central PMCID: PMC11835327.

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Njagi LN, Tram KH, Zifodya JS, Paul S, Ross JM, Murithi W, Mwongera Z, Kiplimo R, Ong'ang'o JR, Fennelly KP, Hawn TR, Nduba V, Horne DJ. Pulmonary Tuberculosis Infectiousness of Persons Identified Through Active and Passive Case-finding in a High-burden Setting. Open Forum Infect Dis. 2025 Mar;12(3):ofaf077. doi: 10.1093/ofid/ofaf077. eCollection 2025 Mar. PubMed PMID: 40046891; PubMed Central PMCID: PMC11880886.

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Arriaga MB, Amorim G, Figueiredo MC, Staats C, Kritski AL, Cordeiro-Santos M, Rolla VC, Andrade BB, Sterling TR, RePORT-Brazil consortium. Effect of Smoking on Longitudinal Interferon γ Release Assay Results Among Close Contacts of People with Pulmonary Tuberculosis. J Infect Dis. 2025 Feb 4;231(1):103-108. doi: 10.1093/infdis/jiae285. PubMed PMID: 38820119; PubMed Central PMCID: PMC11793032.

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Njagi LN, Nduba V, Murithi WB, Mwongera Z, Cook K, Mecha J, Chacha R, Fennelly KP, Horne DJ, Hawn TR. Association of Mycobacterium tuberculosis aerosolization and HIV coinfection in the index case with T cell responses in household contacts. Sci Rep. 2025 Jan 2;15(1):224. doi: 10.1038/s41598-024-83965-5. PubMed PMID: 39748008; PubMed Central PMCID: PMC11695726.

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Mendelsohn SC, Andrade BB, Mbandi SK, Andrade AMS, Muwanga VM, Figueiredo MC, Erasmus M, Rolla VC, Thami PK, Cordeiro-Santos M, Penn-Nicholson A, Kritski AL, Hatherill M, Sterling TR, Scriba TJ, RePORT–South Africa and RePORT–Brazil Consortia. Transcriptomic Signatures of Progression to Tuberculosis Disease Among Close Contacts in Brazil. J Infect Dis. 2024 Dec 16;230(6):e1355-e1365. doi: 10.1093/infdis/jiae237. PubMed PMID: 38709708; PubMed Central PMCID: PMC11646616.

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Chin J, Abeydeera N, Repasy T, Rivera-Lugo R, Mitchell G, Nguyen VQ, Zheng W, Richards A, Swaney DL, Krogan NJ, Ernst JD, Cox JS, Budzik JM. Tax1bp1 enhances bacterial virulence and promotes inflammatory responses during Mycobacterium tuberculosis infection of alveolar macrophages. bioRxiv. 2024 Dec 16;. doi: 10.1101/2024.12.16.628616. PubMed PMID: 39763950; PubMed Central PMCID: PMC11702572.

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Njagi LN, Nduba V, Murithi WB, Mwongera Z, Cook K, Mecha J, Chacha R, Fennelly KP, Horne DJ, Hawn TR. Household contact antigen-specific TNF and IL-2 T-cell responses and impact of index case Mycobacterium tuberculosis aerosolization and HIV Co-infection. Res Sq. 2024 Nov 20;. doi: 10.21203/rs.3.rs-4815117/v1. PubMed PMID: 39606489; PubMed Central PMCID: PMC11601854.

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Hai HT, Thanh Hoang Nhat L, Tram TTB, Vinh DD, Nath AP, Donovan J, Thu NTA, Van Thanh D, Bang ND, Ha DTM, Phu NH, Nghia HDT, Van LH, Inouye M, Thwaites GE, Thuong Thuong NT. Whole blood transcriptional profiles and the pathogenesis of tuberculous meningitis. Elife. 2024 Oct 30;13. doi: 10.7554/eLife.92344. PubMed PMID: 39475467; PubMed Central PMCID: PMC11524586.

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Nduba V, Njagi LN, Murithi W, Mwongera Z, Byers J, Logioia G, Peterson G, Segnitz RM, Fennelly K, Hawn TR, Horne DJ. Mycobacterium tuberculosis cough aerosol culture status associates with host characteristics and inflammatory profiles. Nat Commun. 2024 Sep 1;15(1):7604. doi: 10.1038/s41467-024-52122-x. PubMed PMID: 39217183; PubMed Central PMCID: PMC11365933.

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Dill-McFarland KA, Simmons JD, Peterson GJ, Nguyen FK, Campo M, Benchek P, Stein CM, Vaisar T, Mayanja-Kizza H, Boom WH, Hawn TR. Epigenetic programming of host lipid metabolism associated with resistance to TST/IGRA conversion after exposure to Mycobacterium tuberculosis. mSystems. 2024 Sep 17;9(9):e0062824. doi: 10.1128/msystems.00628-24. Epub 2024 Aug 20. PubMed PMID: 39162406; PubMed Central PMCID: PMC11406990.

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Maciag K, Plumlee CR, Cohen SB, Gern BH, Urdahl KB. Reappraising the Role of T Cell-Derived IFN-γ in Restriction of Mycobacterium tuberculosis in the Murine Lung. J Immunol. 2024 Aug 1;213(3):339-346. doi: 10.4049/jimmunol.2400145. PubMed PMID: 38912839; PubMed Central PMCID: PMC11249196.

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Campo M, Dill-McFarland KA, Peterson GJ, Benson B, Skerrett SJ, Hawn TR. Human Alveolar and Monocyte-Derived Human Macrophage Responses to Mycobacterium tuberculosis. J Immunol. 2024 Jul 15;213(2):161-169. doi: 10.4049/jimmunol.2300885. PubMed PMID: 38836816; PubMed Central PMCID: PMC11610518.

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Golovkine GR, Roberts AW, Morrison HM, Rivera-Lugo R, McCall RM, Nilsson H, Garelis NE, Repasy T, Cronce M, Budzik J, Van Dis E, Popov LM, Mitchell G, Zalpuri R, Jorgens D, Cox JS. Author Correction: Autophagy restricts Mycobacterium tuberculosis during acute infection in mice. Nat Microbiol. 2024 Jul;9(7):1899. doi: 10.1038/s41564-024-01605-0. PubMed PMID: 38308100; PubMed Central PMCID: PMC11222042.

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Njagi LN, Kaguthi G, Mecha JO, Hawn TR, Nduba V. Attenuated tuberculin skin test responses associated with Mycobacterium intracellulare sputum colonization in an adolescent TB prevalence survey in Western Kenya. Tuberculosis (Edinb). 2024 Jul;147:102514. doi: 10.1016/j.tube.2024.102514. Epub 2024 May 5. PubMed PMID: 38723342; PubMed Central PMCID: PMC11168861.

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Maerz MD, Cross DL, Seshadri C. Functional and biological implications of clonotypic diversity among human donor-unrestricted T cells. Immunol Cell Biol. 2024 Jul;102(6):474-486. doi: 10.1111/imcb.12751. Epub 2024 Apr 24. Review. PubMed PMID: 38659280; PubMed Central PMCID: PMC11236517.

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Gutierrez J, Nsereko M, Malone LL, Mayanja-Kizza H, Kisingo H, Boom WH, Bark CM, Stein CM. Capturing Recent Mycobacterium tuberculosis Infection by Tuberculin Skin Test vs. Interferon-Gamma Release Assay. Trop Med Infect Dis. 2024 Apr 11;9(4). doi: 10.3390/tropicalmed9040081. PubMed PMID: 38668542; PubMed Central PMCID: PMC11053984.

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Venkatasubramanian S, Plumlee CR, Dill-McFarland KA, Cohen SB, Gern BH, Rane DA, Meyer MK, Saha A, Hinderstein SA, Pearson GL, Lietzke AC, Pacheco A, Chow YH, Hung CF, Soleimanpour SA, Altman M, Urdahl KB, Shah JA. TOLLIP inhibits lipid accumulation and the integrated stress response in alveolar macrophages to control Mycobacterium tuberculosis infection. Nat Microbiol. 2024 Apr;9(4):949-963. doi: 10.1038/s41564-024-01641-w. Epub 2024 Mar 25. PubMed PMID: 38528148; PubMed Central PMCID: PMC11034867.

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Stein CM. Post-pandemic tuberculosis incidence: potential success of active case finding?. Thorax. 2024 Mar 15;79(4):299-300. doi: 10.1136/thorax-2023-221224. PubMed PMID: 38395603; PubMed Central PMCID: PMC11013567.

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Ridolfi F, Amorim G, Peetluk LS, Haas DW, Staats C, Araújo-Pereira M, Cordeiro-Santos M, Kritski AL, Figueiredo MC, Andrade BB, Rolla VC, Sterling TR, Regional Prospective Observational Research in Tuberculosis (RePORT)–Brazil Consortium. Prediction Models for Adverse Drug Reactions During Tuberculosis Treatment in Brazil. J Infect Dis. 2024 Mar 14;229(3):813-823. doi: 10.1093/infdis/jiae025. PubMed PMID: 38262629; PubMed Central PMCID: PMC10938211.

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Tram TTB, Trieu LPT, Nhat LTH, Thu DDA, Quang NL, Bang ND, Chau TTH, Thwaites GE, Walker TM, Ha VTN, Thuong NTT. Targeted sequencing from cerebrospinal fluid for rapid identification of drug-resistant tuberculous meningitis. J Clin Microbiol. 2024 Apr 10;62(4):e0128723. doi: 10.1128/jcm.01287-23. Epub 2024 Mar 11. PubMed PMID: 38466092; PubMed Central PMCID: PMC11005362.

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Hong H, Dill-McFarland KA, Simmons JD, Peterson GJ, Benchek P, Mayanja-Kizza H, Boom WH, Stein CM, Hawn TR. Mycobacterium tuberculosis-dependent monocyte expression quantitative trait loci, cytokine production, and TB pathogenesis. Front Immunol. 2024;15:1359178. doi: 10.3389/fimmu.2024.1359178. eCollection 2024. PubMed PMID: 38515745; PubMed Central PMCID: PMC10954790.

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Horne D, Nduba V, Njagi L, Murithi W, Mwongera Z, Logioia G, Peterson G, Segnitz RM, Fennelly K, Hawn T. Tuberculosis Infectiousness is Associated with Distinct Clinical and Inflammatory Profiles. Res Sq. 2024 Jan 10;. doi: 10.21203/rs.3.rs-3722244/v1. PubMed PMID: 38328225; PubMed Central PMCID: PMC10849670.

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Sharma M, Nduba V, Njagi LN, Murithi W, Mwongera Z, Hawn TR, Patel SN, Horne DJ. TBscreen: A passive cough classifier for tuberculosis screening with a controlled dataset. Sci Adv. 2024 Jan 5;10(1):eadi0282. doi: 10.1126/sciadv.adi0282. Epub 2024 Jan 3. PubMed PMID: 38170773; PubMed Central PMCID: PMC10776005.

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Garcia LS, Costa AG, Araújo-Pereira M, Spener-Gomes R, Aguiar AF, Souza AB, Lima LOA, Benjamin A, Rocha MS, Moreira ASR, Silva J, Santos SRN, Lourenço MC, Figueiredo MC, Turner MM, Kritski AL, Rolla VC, Sterling TR, Andrade BB, Cordeiro-Santos M, RePORT Brazil Consortium. The Xpert® MTB/RIF cycle threshold value predicts M. tuberculosis transmission to close contacts in a Brazilian prospective multicenter cohort. Clin Infect Dis. 2024 Jan 3;. doi: 10.1093/cid/ciad794. [Epub ahead of print] PubMed PMID: 38170196; PubMed Central PMCID: PMC12609578.

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Escudero JN, Mecha J, Richardson BA, Maleche-Obimbo E, Matemo D, Kinuthia J, John-Stewart G, LaCourse SM. Impact of Human Immunodeficiency Virus and Peripartum Period on Mycobacterium tuberculosis Infection Detection. J Infect Dis. 2023 Dec 20;228(12):1709-1719. doi: 10.1093/infdis/jiad416. PubMed PMID: 37768184; PubMed Central PMCID: PMC10733725.

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Li L, Lyon CJ, LaCourse SM, Zheng W, Stern J, Escudero JN, Murithi WB, Njagi L, John-Stewart G, Hawn TR, Nduba V, Abdelgaliel W, Tombler T, Horne D, Jiang L, Hu TY. Sensitive Blood-Based Detection of HIV-1 and Mycobacterium tuberculosis Peptides for Disease Diagnosis by Immuno-Affinity Liquid Chromatography-Tandem Mass Spectrometry: A Method Development and Proof-of-Concept Study. Clin Chem. 2023 Dec 1;69(12):1409-1419. doi: 10.1093/clinchem/hvad173. PubMed PMID: 37956323; PubMed Central PMCID: PMC10965313.

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Mecha J, Escudero JN, Richardson BA, Maleche-Obimbo E, Matemo D, Kinuthia J, John-Stewart G, LaCourse SM. Maternal HIV Status and Risk of Infant Mycobacterium tuberculosis Infection as Measured by Tuberculin Skin Test. Pediatr Infect Dis J. 2024 Mar 1;43(3):250-256. doi: 10.1097/INF.0000000000004190. Epub 2023 Nov 22. PubMed PMID: 37991383; PubMed Central PMCID: PMC10922277.

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Silcocks M, Chang X, Thuong Thuong NT, Qin Y, Minh Ha DT, Khac Thai PV, Vijay S, Anh Thu DD, Ngoc Ha VT, Ngoc Nhung H, Huu Lan N, Quynh Nhu NT, Edwards D, Nath A, Pham K, Duc Bang N, Hong Chau TT, Thwaites G, Heemskerk AD, Chuen Khor C, Teo YY, Inouye M, Ong RT-H, Caws M, Holt KE, Dunstan SJ. Evolution and transmission of antibiotic resistance is driven by Beijing lineage Mycobacterium tuberculosis in Vietnam. Microbiol Spectr. 2023 Dec 12;11(6):e0256223. doi: 10.1128/spectrum.02562-23. Epub 2023 Nov 16. PubMed PMID: 37971428; PubMed Central PMCID: PMC10714959.

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Onyango DO, van der Sande MAB, Yuen CM, Were J, Mecha J, Njagi LN, Panpradist N, Matemo D, Leon D, Lutz B, Kinuthia J, John-Stewart G, Lacourse SM. Biomarker-confirmed suboptimal adherence to isoniazid preventive therapy among children with HIV in western Kenya. AIDS. 2024 Jan 1;38(1):39-47. doi: 10.1097/QAD.0000000000003719. Epub 2023 Sep 28. PubMed PMID: 37773037; PubMed Central PMCID: PMC10840836.

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Hong H, Dill-Mcfarland KA, Benson B, Simmons JD, Peterson GJ, Benchek P, Stein CM, Boom WH, Mayanja-Kizza H, Hawn TR. Mycobacterium tuberculosis -induced monocyte transcriptional responses associated with resistance to tuberculin skin test/interferon-γ release assay conversion in people with HIV. AIDS. 2023 Dec 1;37(15):2287-2296. doi: 10.1097/QAD.0000000000003716. Epub 2023 Sep 8. PubMed PMID: 37696247; PubMed Central PMCID: PMC10873024.

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Hong H, Dill-McFarland KA, Simmons JD, Peterson GJ, Benchek P, Mayanja-Kizza H, Boom WH, Stein CM, Hawn TR. Mycobacterium tuberculosis-dependent Monocyte Expression Quantitative Trait Loci and Tuberculosis Pathogenesis. medRxiv. 2023 Aug 29;. doi: 10.1101/2023.08.28.23294698. PubMed PMID: 37693490; PubMed Central PMCID: PMC10491362.

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Sabo MC, Thuong NTT, Chang X, Ardiansyah E, Tram TTB, Hai HT, Nghia HDT, Bang ND, Dian S, Ganiem AR, Shaporifar S, Kumar V, Li Z, Hibberd M, Khor CC, Thwaites GE, Heemskerk D, van Laarhoven A, van Crevel R, Dunstan SJ, Shah JA. MUC5AC Genetic Variation Is Associated With Tuberculous Meningitis Cerebral Spinal Fluid Cytokine Responses and Mortality. J Infect Dis. 2023 Aug 11;228(3):343-352. doi: 10.1093/infdis/jiad050. PubMed PMID: 36823694; PubMed Central PMCID: PMC10420404.

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Morrison HM, Craft J, Rivera-Lugo R, Johnson JR, Golovkine GR, Bell SL, Dodd CE, Van Dis E, Beatty WL, Margolis SR, Repasy T, Shaker I, Lee AY, Vance RE, Stanley SA, Watson RO, Krogan NJ, Portnoy DA, Penn BH, Cox JS. Deficiency in Galectin-3, -8, and -9 impairs immunity to chronic Mycobacterium tuberculosis infection but not acute infection with multiple intracellular pathogens. PLoS Pathog. 2023 Jun;19(6):e1011088. doi: 10.1371/journal.ppat.1011088. eCollection 2023 Jun. PubMed PMID: 37352334; PubMed Central PMCID: PMC10325092.

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Dill-McFarland KA, Mitchell K, Batchu S, Segnitz RM, Benson B, Janczyk T, Cox MS, Mayanja-Kizza H, Boom WH, Benchek P, Stein CM, Hawn TR, Altman MC. Kimma: flexible linear mixed effects modeling with kinship covariance for RNA-seq data. Bioinformatics. 2023 May 4;39(5). doi: 10.1093/bioinformatics/btad279. PubMed PMID: 37140544; PubMed Central PMCID: PMC10182851.