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  1. Singh D, Mallon J, Poddar A, Wang Y, Tippana R, Yang O, Bailey S, Ha T. Real-time observation of DNA target interrogation and product release by the RNA-guided endonuclease CRISPR Cpf1 (Cas12a). Proc Natl Acad Sci U S A. 2018 May 22;115(21):5444-5449. doi: 10.1073/pnas.1718686115. Epub 2018 May 7. PubMed PMID: 29735714; PubMed Central PMCID: PMC6003496.
  2. Singh D, Wang Y, Mallon J, Yang O, Fei J, Poddar A, Ceylan D, Bailey S, Ha T. Mechanisms of improved specificity of engineered Cas9s revealed by single-molecule FRET analysis. Nat Struct Mol Biol. 2018 Apr;25(4):347-354. doi: 10.1038/s41594-018-0051-7. Epub 2018 Apr 5. PubMed PMID: 29622787; PubMed Central PMCID: PMC6195204.
  3. Kumar P, Chauhan V, Silva JRA, Lameira J, d'Andrea FB, Li SG, Ginell SL, Freundlich JS, Alves CN, Bailey S, Cohen KA, Lamichhane G. Mycobacterium abscessus l,d-Transpeptidases Are Susceptible to Inactivation by Carbapenems and Cephalosporins but Not Penicillins. Antimicrob Agents Chemother. 2017 Oct;61(10). doi: 10.1128/AAC.00866-17. Print 2017 Oct. PubMed PMID: 28760902; PubMed Central PMCID: PMC5610527.
  4. Johnson K, Bailey S. Microbiology: The case of the mysterious messenger. Nature. 2017 Aug 31;548(7669):527-528. doi: 10.1038/nature23532. Epub 2017 Aug 2. PubMed PMID: 28783729.
  5. Kuznedelov K, Mekler V, Lemak S, Tokmina-Lukaszewska M, Datsenko KA, Jain I, Savitskaya E, Mallon J, Shmakov S, Bothner B, Bailey S, Yakunin AF, Severinov K, Semenova E. Altered stoichiometry Escherichia coli Cascade complexes with shortened CRISPR RNA spacers are capable of interference and primed adaptation. Nucleic Acids Res. 2016 Dec 15;44(22):10849-10861. doi: 10.1093/nar/gkw914. Epub 2016 Oct 13. PubMed PMID: 27738137; PubMed Central PMCID: PMC5159557.
  6. Ramachandran A, Bailey S. Memory Upgrade: Insights into Primed Adaptation by CRISPR-Cas Immune Systems. Mol Cell. 2016 Nov 17;64(4):641-642. doi: 10.1016/j.molcel.2016.11.008. PubMed PMID: 27863223; PubMed Central PMCID: PMC5539784.
  7. Mallon J, Bailey S. A molecular arms race: new insights into anti-CRISPR mechanisms. Nat Struct Mol Biol. 2016 Sep 6;23(9):765-6. doi: 10.1038/nsmb.3287. PubMed PMID: 27605202; PubMed Central PMCID: PMC5539770.
  8. Hayes RP, Xiao Y, Ding F, van Erp PB, Rajashankar K, Bailey S, Wiedenheft B, Ke A. Structural basis for promiscuous PAM recognition in type I-E Cascade from E. coli. Nature. 2016 Feb 25;530(7591):499-503. doi: 10.1038/nature16995. Epub 2016 Feb 10. PubMed PMID: 26863189; PubMed Central PMCID: PMC5134256.
  9. Chen H, Bailey S. Structural biology. Cas9, poised for DNA cleavage. Science. 2016 Feb 19;351(6275):811-2. doi: 10.1126/science.aaf2089. PubMed PMID: 26912877.
  10. Estrella MA, Kuo FT, Bailey S. RNA-activated DNA cleavage by the Type III-B CRISPR-Cas effector complex. Genes Dev. 2016 Feb 15;30(4):460-70. doi: 10.1101/gad.273722.115. Epub 2016 Feb 4. PubMed PMID: 26848046; PubMed Central PMCID: PMC4762430.
  11. van Erp PB, Jackson RN, Carter J, Golden SM, Bailey S, Wiedenheft B. Mechanism of CRISPR-RNA guided recognition of DNA targets in Escherichia coli. Nucleic Acids Res. 2015 Sep 30;43(17):8381-91. doi: 10.1093/nar/gkv793. Epub 2015 Aug 3. PubMed PMID: 26243775; PubMed Central PMCID: PMC4787809.
  12. Hodgson A, Wier EM, Fu K, Sun X, Yu H, Zheng W, Sham HP, Johnson K, Bailey S, Vallance BA, Wan F. Metalloprotease NleC suppresses host NF-κB/inflammatory responses by cleaving p65 and interfering with the p65/RPS3 interaction. PLoS Pathog. 2015 Mar;11(3):e1004705. doi: 10.1371/journal.ppat.1004705. eCollection 2015 Mar. PubMed PMID: 25756944; PubMed Central PMCID: PMC4355070.
  13. Mulepati S, Héroux A, Bailey S. Structural biology. Crystal structure of a CRISPR RNA-guided surveillance complex bound to a ssDNA target. Science. 2014 Sep 19;345(6203):1479-84. doi: 10.1126/science.1256996. Epub 2014 Aug 14. PubMed PMID: 25123481; PubMed Central PMCID: PMC4427192.
  14. Chen H, Choi J, Bailey S. Cut site selection by the two nuclease domains of the Cas9 RNA-guided endonuclease. J Biol Chem. 2014 May 9;289(19):13284-94. doi: 10.1074/jbc.M113.539726. Epub 2014 Mar 14. PubMed PMID: 24634220; PubMed Central PMCID: PMC4036338.
  15. Bailey S. The Cmr complex: an RNA-guided endoribonuclease. Biochem Soc Trans. 2013 Dec;41(6):1464-7. doi: 10.1042/BST20130216. Review. PubMed PMID: 24256238.
  16. Brandt GS, Bailey S. Dematin, a human erythrocyte cytoskeletal protein, is a substrate for a recombinant FIKK kinase from Plasmodium falciparum. Mol Biochem Parasitol. 2013 Sep;191(1):20-3. doi: 10.1016/j.molbiopara.2013.08.003. Epub 2013 Aug 21. PubMed PMID: 23973789.
  17. Mulepati S, Bailey S. In vitro reconstitution of an Escherichia coli RNA-guided immune system reveals unidirectional, ATP-dependent degradation of DNA target. J Biol Chem. 2013 Aug 2;288(31):22184-92. doi: 10.1074/jbc.M113.472233. Epub 2013 Jun 11. PubMed PMID: 23760266; PubMed Central PMCID: PMC3829311.
  18. Mulepati S, Orr A, Bailey S. Crystal structure of the largest subunit of a bacterial RNA-guided immune complex and its role in DNA target binding. J Biol Chem. 2012 Jun 29;287(27):22445-9. doi: 10.1074/jbc.C112.379503. Epub 2012 May 23. PubMed PMID: 22621933; PubMed Central PMCID: PMC3391111.
  19. Bailey S. Nuclear replication: Hidden iron-sulfur clusters. Nat Chem Biol. 2011 Dec 15;8(1):24-5. doi: 10.1038/nchembio.737. PubMed PMID: 22173356.
  20. Mulepati S, Bailey S. Structural and biochemical analysis of nuclease domain of clustered regularly interspaced short palindromic repeat (CRISPR)-associated protein 3 (Cas3). J Biol Chem. 2011 Sep 9;286(36):31896-903. doi: 10.1074/jbc.M111.270017. Epub 2011 Jul 20. PubMed PMID: 21775431; PubMed Central PMCID: PMC3173111.
  21. Yin FF, Bailey S, Innis CA, Ciubotaru M, Kamtekar S, Steitz TA, Schatz DG. Structure of the RAG1 nonamer binding domain with DNA reveals a dimer that mediates DNA synapsis. Nat Struct Mol Biol. 2009 May;16(5):499-508. doi: 10.1038/nsmb.1593. Epub 2009 Apr 26. PubMed PMID: 19396172; PubMed Central PMCID: PMC2715281.
  22. Durniak KJ, Bailey S, Steitz TA. The structure of a transcribing T7 RNA polymerase in transition from initiation to elongation. Science. 2008 Oct 24;322(5901):553-7. doi: 10.1126/science.1163433. PubMed PMID: 18948533; PubMed Central PMCID: PMC2892258.
  23. Wing RA, Bailey S, Steitz TA. Insights into the replisome from the structure of a ternary complex of the DNA polymerase III alpha-subunit. J Mol Biol. 2008 Oct 17;382(4):859-69. doi: 10.1016/j.jmb.2008.07.058. Epub 2008 Jul 27. PubMed PMID: 18691598; PubMed Central PMCID: PMC2614274.
  24. Evans RN, Blaha G, Bailey S, Steitz TA. The structure of LepA, the ribosomal back translocase. Proc Natl Acad Sci U S A. 2008 Mar 25;105(12):4673-8. doi: 10.1073/pnas.0801308105. Epub 2008 Mar 24. PubMed PMID: 18362332; PubMed Central PMCID: PMC2290774.
  25. Bailey S, Eliason WK, Steitz TA. Structure of hexameric DnaB helicase and its complex with a domain of DnaG primase. Science. 2007 Oct 19;318(5849):459-63. doi: 10.1126/science.1147353. PubMed PMID: 17947583.
  26. Bailey S, Eliason WK, Steitz TA. The crystal structure of the Thermus aquaticus DnaB helicase monomer. Nucleic Acids Res. 2007;35(14):4728-36. doi: 10.1093/nar/gkm507. Epub 2007 Jul 1. PubMed PMID: 17606462; PubMed Central PMCID: PMC1950529.
  27. Bailey S, Wing RA, Steitz TA. The structure of T. aquaticus DNA polymerase III is distinct from eukaryotic replicative DNA polymerases. Cell. 2006 Sep 8;126(5):893-904. doi: 10.1016/j.cell.2006.07.027. PubMed PMID: 16959569.
  28. Bailey S, Sedelnikova SE, Mesa P, Ayora S, Alonso JC, Rafferty JB. Crystallization of the Bacillus subtilis SPP1 bacteriophage helicase loader protein G39P. Acta Crystallogr D Biol Crystallogr. 2003 Jun;59(Pt 6):1090-2. doi: 10.1107/s0907444903007236. Epub 2003 May 23. PubMed PMID: 12777784.
  29. Bailey S, Sedelnikova SE, Mesa P, Ayora S, Waltho JP, Ashcroft AE, Baron AJ, Alonso JC, Rafferty JB. Structural analysis of Bacillus subtilis SPP1 phage helicase loader protein G39P. J Biol Chem. 2003 Apr 25;278(17):15304-12. doi: 10.1074/jbc.M209300200. Epub 2003 Feb 13. PubMed PMID: 12588876.
  30. Abdelghany HM, Bailey S, Blackburn GM, Rafferty JB, McLennan AG. Analysis of the catalytic and binding residues of the diadenosine tetraphosphate pyrophosphohydrolase from Caenorhabditis elegans by site-directed mutagenesis. J Biol Chem. 2003 Feb 14;278(7):4435-9. doi: 10.1074/jbc.M211983200. Epub 2002 Dec 9. PubMed PMID: 12475970.
  31. Bailey S, Sedelnikova SE, Blackburn GM, Abdelghany HM, Baker PJ, McLennan AG, Rafferty JB. The crystal structure of diadenosine tetraphosphate hydrolase from Caenorhabditis elegans in free and binary complex forms. Structure. 2002 Apr;10(4):589-600. PubMed PMID: 11937063.
  32. Bailey S, Sedelnikova SE, Blackburn GM, Abdelghany HM, McLennan AG, Rafferty JB. Crystallization of a complex of Caenorhabditis elegans diadenosine tetraphosphate hydrolase and a non-hydrolysable substrate analogue, AppCH2ppA. Acta Crystallogr D Biol Crystallogr. 2002 Mar;58(Pt 3):526-8. doi: 10.1107/s0907444902000768. Epub 2002 Feb 21. PubMed PMID: 11856844.
  33. Abdelghany HM, Gasmi L, Cartwright JL, Bailey S, Rafferty JB, McLennan AG. Cloning, characterisation and crystallisation of a diadenosine 5',5"'-P(1),P(4)-tetraphosphate pyrophosphohydrolase from Caenorhabditis elegans. Biochim Biophys Acta. 2001 Nov 26;1550(1):27-36. doi: 10.1016/s0167-4838(01)00263-1. PubMed PMID: 11738085.
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