My Bibliography

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gEAR: Gene Expression Analysis Resource portal for community-driven, multi-omic data exploration. Nature methods. . NIHMSID: NIHMS1792216.

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gEAR: Gene Expression Analysis Resource portal for community-driven, multi-omic data exploration. Nature methods. . NIHMSID: NIHMS1792219.

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Barilan YM, Hertzano R, Weintraub M. Bedside humanities. A vision from the renaissance and two case reports from the present. Isr Med Assoc J. 2000 Apr;2(4):327-31. PubMed PMID: 10804917.

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Walsh T, Walsh V, Vreugde S, Hertzano R, Shahin H, Haika S, Lee MK, Kanaan M, King MC, Avraham KB. From flies' eyes to our ears: mutations in a human class III myosin cause progressive nonsyndromic hearing loss DFNB30. Proc Natl Acad Sci U S A. 2002 May 28;99(11):7518-23. doi: 10.1073/pnas.102091699. PubMed PMID: 12032315; PubMed Central PMCID: PMC124268.

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Donaudy F, Ferrara A, Esposito L, Hertzano R, Ben-David O, Bell RE, Melchionda S, Zelante L, Avraham KB, Gasparini P. Multiple mutations of MYO1A, a cochlear-expressed gene, in sensorineural hearing loss. Am J Hum Genet. 2003 Jun;72(6):1571-7. doi: 10.1086/375654. Epub 2003 May 6. PubMed PMID: 12736868; PubMed Central PMCID: PMC1180318.

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Hertzano R, Montcouquiol M, Rashi-Elkeles S, Elkon R, Yücel R, Frankel WN, Rechavi G, Möröy T, Friedman TB, Kelley MW, Avraham KB. Transcription profiling of inner ears from Pou4f3(ddl/ddl) identifies Gfi1 as a target of the Pou4f3 deafness gene. Hum Mol Genet. 2004 Sep 15;13(18):2143-53. doi: 10.1093/hmg/ddh218. Epub 2004 Jul 14. PubMed PMID: 15254021.

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Rhodes CR, Hertzano R, Fuchs H, Bell RE, de Angelis MH, Steel KP, Avraham KB. A Myo7a mutation cosegregates with stereocilia defects and low-frequency hearing impairment. Mamm Genome. 2004 Sep;15(9):686-97. doi: 10.1007/s00335-004-2344-x. PubMed PMID: 15389316.

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Clough RL, Sud R, Davis-Silberman N, Hertzano R, Avraham KB, Holley M, Dawson SJ. Brn-3c (POU4F3) regulates BDNF and NT-3 promoter activity. Biochem Biophys Res Commun. 2004 Nov 5;324(1):372-81. doi: 10.1016/j.bbrc.2004.09.074. PubMed PMID: 15465029.

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Fiolka K, Hertzano R, Vassen L, Zeng H, Hermesh O, Avraham KB, Dührsen U, Möröy T. Gfi1 and Gfi1b act equivalently in haematopoiesis, but have distinct, non-overlapping functions in inner ear development. EMBO Rep. 2006 Mar;7(3):326-33. doi: 10.1038/sj.embor.7400618. Epub 2006 Jan 6. PubMed PMID: 16397623; PubMed Central PMCID: PMC1456886.

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Hertzano R, Dror AA, Montcouquiol M, Ahmed ZM, Ellsworth B, Camper S, Friedman TB, Kelley MW, Avraham KB. Lhx3, a LIM domain transcription factor, is regulated by Pou4f3 in the auditory but not in the vestibular system. Eur J Neurosci. 2007 Feb;25(4):999-1005. doi: 10.1111/j.1460-9568.2007.05332.x. PubMed PMID: 17331196.

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Hertzano R, Shalit E, Rzadzinska AK, Dror AA, Song L, Ron U, Tan JT, Shitrit AS, Fuchs H, Hasson T, Ben-Tal N, Sweeney HL, de Angelis MH, Steel KP, Avraham KB. A Myo6 mutation destroys coordination between the myosin heads, revealing new functions of myosin VI in the stereocilia of mammalian inner ear hair cells. PLoS Genet. 2008 Oct 3;4(10):e1000207. doi: 10.1371/journal.pgen.1000207. PubMed PMID: 18833301; PubMed Central PMCID: PMC2543112.

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Zhang X, Voskens CJ, Sallin M, Maniar A, Montes CL, Zhang Y, Lin W, Li G, Burch E, Tan M, Hertzano R, Chapoval AI, Tamada K, Gastman BR, Schulze DH, Strome SE. CD137 promotes proliferation and survival of human B cells. J Immunol. 2010 Jan 15;184(2):787-95. doi: 10.4049/jimmunol.0901619. Epub 2009 Dec 11. PubMed PMID: 20008291.

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Hertzano R, Puligilla C, Chan SL, Timothy C, Depireux DA, Ahmed Z, Wolf J, Eisenman DJ, Friedman TB, Riazuddin S, Kelley MW, Strome SE. CD44 is a marker for the outer pillar cells in the early postnatal mouse inner ear. J Assoc Res Otolaryngol. 2010 Sep;11(3):407-18. doi: 10.1007/s10162-010-0211-x. Epub 2010 Apr 13. PubMed PMID: 20386946; PubMed Central PMCID: PMC2914240.

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Hertzano R, Eisenman DJ. Stapes bar. Otolaryngol Head Neck Surg. 2010 Jul;143(1):163-4. doi: 10.1016/j.otohns.2010.03.004. Epub 2010 May 14. PubMed PMID: 20620638.

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Hertzano R, Eisenman DJ. Large, symptomatic tension pneumocele: 23 years after translabyrinthine resection of an acoustic neuroma. Otolaryngol Head Neck Surg. 2011 Mar;144(3):477-8. doi: 10.1177/0194599810391602. Epub 2010 Dec 20. PubMed PMID: 21493217.

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Elkan-Miller T, Ulitsky I, Hertzano R, Rudnicki A, Dror AA, Lenz DR, Elkon R, Irmler M, Beckers J, Shamir R, Avraham KB. Integration of transcriptomics, proteomics, and microRNA analyses reveals novel microRNA regulation of targets in the mammalian inner ear. PLoS One. 2011 Apr 5;6(4):e18195. doi: 10.1371/journal.pone.0018195. PubMed PMID: 21483685; PubMed Central PMCID: PMC3071727.

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Kurima K, Hertzano R, Gavrilova O, Monahan K, Shpargel KB, Nadaraja G, Kawashima Y, Lee KY, Ito T, Higashi Y, Eisenman DJ, Strome SE, Griffith AJ. A noncoding point mutation of Zeb1 causes multiple developmental malformations and obesity in Twirler mice. PLoS Genet. 2011 Sep;7(9):e1002307. doi: 10.1371/journal.pgen.1002307. Epub 2011 Sep 29. PubMed PMID: 21980308; PubMed Central PMCID: PMC3183090.

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Hertzano R, Elkon R, Kurima K, Morrisson A, Chan SL, Sallin M, Biedlingmaier A, Darling DS, Griffith AJ, Eisenman DJ, Strome SE. Cell type-specific transcriptome analysis reveals a major role for Zeb1 and miR-200b in mouse inner ear morphogenesis. PLoS Genet. 2011 Sep;7(9):e1002309. doi: 10.1371/journal.pgen.1002309. Epub 2011 Sep 29. PubMed PMID: 21980309; PubMed Central PMCID: PMC3183091.

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Voskens CJ, Sewell D, Hertzano R, DeSanto J, Rollins S, Lee M, Taylor R, Wolf J, Suntharalingam M, Gastman B, Papadimitriou JC, Lu C, Tan M, Morales R, Cullen K, Celis E, Mann D, Strome SE. Induction of MAGE-A3 and HPV-16 immunity by Trojan vaccines in patients with head and neck carcinoma. Head Neck. 2012 Dec;34(12):1734-46. doi: 10.1002/hed.22004. Epub 2012 Jan 27. PubMed PMID: 22287423; PubMed Central PMCID: PMC3725741.

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Hertzano R, Elkon R. High throughput gene expression analysis of the inner ear. Hear Res. 2012 Jun;288(1-2):77-88. doi: 10.1016/j.heares.2012.01.002. Epub 2012 Feb 8. PubMed PMID: 22710153.

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Harvey RS, Hertzano R, Kelman SE, Eisenman DJ. Pulse-synchronous tinnitus and sigmoid sinus wall anomalies: descriptive epidemiology and the idiopathic intracranial hypertension patient population. Otol Neurotol. 2014 Jan;35(1):7-15. doi: 10.1097/MAO.0b013e3182a4756c. PubMed PMID: 24270723.

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Raghavan P, Serulle Y, Gandhi D, Morales R, Quinn K, Angster K, Hertzano R, Eisenman D. Postoperative Imaging Findings following Sigmoid Sinus Wall Reconstruction for Pulse Synchronous Tinnitus. AJNR Am J Neuroradiol. 2016 Jan;37(1):136-42. doi: 10.3174/ajnr.A4511. Epub 2015 Oct 1. PubMed PMID: 26427834; PubMed Central PMCID: PMC7960191.

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Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R. RFX transcription factors are essential for hearing in mice. Nat Commun. 2015 Oct 15;6:8549. doi: 10.1038/ncomms9549. PubMed PMID: 26469318; PubMed Central PMCID: PMC4634137.

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Hertzano R, Teplitzky TB, Eisenman DJ. Clinical Evaluation of Tinnitus. Neuroimaging Clin N Am. 2016 May;26(2):197-205. doi: 10.1016/j.nic.2015.12.004. Epub 2016 Feb 28. Review. PubMed PMID: 27154603.

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Matern M, Vijayakumar S, Margulies Z, Milon B, Song Y, Elkon R, Zhang X, Jones SM, Hertzano R. Gfi1(Cre) mice have early onset progressive hearing loss and induce recombination in numerous inner ear non-hair cells. Sci Rep. 2017 Feb 9;7:42079. doi: 10.1038/srep42079. PubMed PMID: 28181545; PubMed Central PMCID: PMC5299610.

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Crowson MG, Hertzano R, Tucci DL. Emerging Therapies for Sensorineural Hearing Loss. Otol Neurotol. 2017 Jul;38(6):792-803. doi: 10.1097/MAO.0000000000001427. Review. PubMed PMID: 28383465; PubMed Central PMCID: PMC5465007.

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Ortlip TE, Drake VE, Raghavan P, Papadimitriou JC, Porter NC, Eisenman DJ, Hertzano R. Inflammatory Pseudotumor of the Temporal Bone: A Case Series. Otol Neurotol. 2017 Aug;38(7):1024-1031. doi: 10.1097/MAO.0000000000001465. PubMed PMID: 28570415; PubMed Central PMCID: PMC5762198.

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Joshi SS, Tandukar B, Castaneda M, Jiang S, Diwakar G, Hertzano RP, Hornyak TJ. Characterization of a new, inducible transgenic mouse model with GFP expression in melanocytes and their precursors. Gene Expr Patterns. 2018 Jan;27:76-84. doi: 10.1016/j.gep.2017.10.003. Epub 2017 Oct 21. PubMed PMID: 29061525; PubMed Central PMCID: PMC5835204.

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Milon B, Mitra S, Song Y, Margulies Z, Casserly R, Drake V, Mong JA, Depireux DA, Hertzano R. The impact of biological sex on the response to noise and otoprotective therapies against acoustic injury in mice. Biol Sex Differ. 2018 Mar 12;9(1):12. doi: 10.1186/s13293-018-0171-0. PubMed PMID: 29530094; PubMed Central PMCID: PMC5848513.

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Matern MS, Beirl A, Ogawa Y, Song Y, Paladugu N, Kindt KS, Hertzano R. Transcriptomic Profiling of Zebrafish Hair Cells Using RiboTag. Front Cell Dev Biol. 2018;6:47. doi: 10.3389/fcell.2018.00047. eCollection 2018. PubMed PMID: 29765956; PubMed Central PMCID: PMC5939014.

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Eisenman DJ, Raghavan P, Hertzano R, Morales R. Evaluation and treatment of pulsatile tinnitus associated with sigmoid sinus wall anomalies. Laryngoscope. 2018 Oct;128 Suppl 2:S1-S13. doi: 10.1002/lary.27218. Epub 2018 May 14. PubMed PMID: 29756346.

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Matern MS, Beirl A, Ogawa Y, Song Y, Paladugu N, Kindt KS, Hertzano R. Corrigendum: Transcriptomic Profiling of Zebrafish Hair Cells Using RiboTag. Front Cell Dev Biol. 2018;6:84. doi: 10.3389/fcell.2018.00084. eCollection 2018. PubMed PMID: 30191151; PubMed Central PMCID: PMC6120597.

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Song Y, Milon B, Ott S, Zhao X, Sadzewicz L, Shetty A, Boger ET, Tallon LJ, Morell RJ, Mahurkar A, Hertzano R. A comparative analysis of library prep approaches for sequencing low input translatome samples. BMC Genomics. 2018 Sep 21;19(1):696. doi: 10.1186/s12864-018-5066-2. PubMed PMID: 30241496; PubMed Central PMCID: PMC6151020.

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Chessum L, Matern MS, Kelly MC, Johnson SL, Ogawa Y, Milon B, McMurray M, Driver EC, Parker A, Song Y, Codner G, Esapa CT, Prescott J, Trent G, Wells S, Dragich AK, Frolenkov GI, Kelley MW, Marcotti W, Brown SDM, Elkon R, Bowl MR, Hertzano R. Helios is a key transcriptional regulator of outer hair cell maturation. Nature. 2018 Nov;563(7733):696-700. doi: 10.1038/s41586-018-0728-4. Epub 2018 Nov 21. PubMed PMID: 30464345; PubMed Central PMCID: PMC6542691.

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Shuster BZ, Depireux DA, Mong JA, Hertzano R. Sex differences in hearing: Probing the role of estrogen signaling. J Acoust Soc Am. 2019 Jun;145(6):3656. doi: 10.1121/1.5111870. PubMed PMID: 31255106; PubMed Central PMCID: PMC6588519.

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Weinreich HM, Khayat S, Hertzano RP, Briggs SE, Agrawal Y. The Women in Neurotology (WIN)-A Cross-sectional Survey. Otol Neurotol. 2019 Jun;40(5):557-558. doi: 10.1097/MAO.0000000000002268. PubMed PMID: 31083072.

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Jung JS, Zhang KD, Wang Z, McMurray M, Tkaczuk A, Ogawa Y, Hertzano R, Coate TM. Semaphorin-5B Controls Spiral Ganglion Neuron Branch Refinement during Development. J Neurosci. 2019 Aug 14;39(33):6425-6438. doi: 10.1523/JNEUROSCI.0113-19.2019. Epub 2019 Jun 17. PubMed PMID: 31209173; PubMed Central PMCID: PMC6697390.

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Nesmith JE, Hostelley TL, Leitch CC, Matern MS, Sethna S, McFarland R, Lodh S, Westlake CJ, Hertzano R, Ahmed ZM, Zaghloul NA. Genomic knockout of alms1 in zebrafish recapitulates Alström syndrome and provides insight into metabolic phenotypes. Hum Mol Genet. 2019 Jul 1;28(13):2212-2223. doi: 10.1093/hmg/ddz053. PubMed PMID: 31220269; PubMed Central PMCID: PMC6586141.

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Dunbar LA, Patni P, Aguilar C, Mburu P, Corns L, Wells HR, Delmaghani S, Parker A, Johnson S, Williams D, Esapa CT, Simon MM, Chessum L, Newton S, Dorning J, Jeyarajan P, Morse S, Lelli A, Codner GF, Peineau T, Gopal SR, Alagramam KN, Hertzano R, Dulon D, Wells S, Williams FM, Petit C, Dawson SJ, Brown SD, Marcotti W, El-Amraoui A, Bowl MR. Clarin-2 is essential for hearing by maintaining stereocilia integrity and function. EMBO Mol Med. 2019 Sep;11(9):e10288. doi: 10.15252/emmm.201910288. Epub 2019 Aug 26. PubMed PMID: 31448880; PubMed Central PMCID: PMC6728604.

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Clifford RE, Hertzano R, Ohlemiller KK. Untangling the genomics of noise-induced hearing loss and tinnitus: Contributions of Mus musculus and Homo sapiens. J Acoust Soc Am. 2019 Nov;146(5):4007. doi: 10.1121/1.5132552. Review. PubMed PMID: 31795683; PubMed Central PMCID: PMC7273513.

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Brooks PM, Rose KP, MacRae ML, Rangoussis KM, Gurjar M, Hertzano R, Coate TM. Pou3f4-expressing otic mesenchyme cells promote spiral ganglion neuron survival in the postnatal mouse cochlea. J Comp Neurol. 2020 Aug;528(12):1967-1985. doi: 10.1002/cne.24867. Epub 2020 Feb 7. PubMed PMID: 31994726; PubMed Central PMCID: PMC7316616.

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Cui Z, Kancherla J, Chang KW, Elmqvist N, Corrada Bravo H. Proactive visual and statistical analysis of genomic data in Epiviz. Bioinformatics. 2020 Apr 1;36(7):2195-2201. doi: 10.1093/bioinformatics/btz883. PubMed PMID: 31782758; PubMed Central PMCID: PMC7868663.

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Hertzano R, Lipford EL, Depireux D. Noise: Acoustic Trauma to the Inner Ear. Otolaryngol Clin North Am. 2020 Aug;53(4):531-542. doi: 10.1016/j.otc.2020.03.008. Epub 2020 Apr 30. Review. PubMed PMID: 32362563.

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Shader MJ, Nguyen N, Cleary M, Hertzano R, Eisenman DJ, Anderson S, Gordon-Salant S, Goupell MJ. Effect of Stimulation Rate on Speech Understanding in Older Cochlear-Implant Users. Ear Hear. 2020 May/Jun;41(3):640-651. doi: 10.1097/AUD.0000000000000793. PubMed PMID: 31702596; PubMed Central PMCID: PMC7190412.

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Engeln M, Song Y, Chandra R, La A, Fox ME, Evans B, Turner MD, Thomas S, Francis TC, Hertzano R, Lobo MK. Individual differences in stereotypy and neuron subtype translatome with TrkB deletion. Mol Psychiatry. 2021 Jun;26(6):1846-1859. doi: 10.1038/s41380-020-0746-0. Epub 2020 May 4. PubMed PMID: 32366954; PubMed Central PMCID: PMC8480032.

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Kolla L, Kelly MC, Mann ZF, Anaya-Rocha A, Ellis K, Lemons A, Palermo AT, So KS, Mays JC, Orvis J, Burns JC, Hertzano R, Driver EC, Kelley MW. Characterization of the development of the mouse cochlear epithelium at the single cell level. Nat Commun. 2020 May 13;11(1):2389. doi: 10.1038/s41467-020-16113-y. PubMed PMID: 32404924; PubMed Central PMCID: PMC7221106.

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Sadler E, Ryals MM, May LA, Martin D, Welsh N, Boger ET, Morell RJ, Hertzano R, Cunningham LL. Cell-Specific Transcriptional Responses to Heat Shock in the Mouse Utricle Epithelium. Front Cell Neurosci. 2020;14:123. doi: 10.3389/fncel.2020.00123. eCollection 2020. PubMed PMID: 32528249; PubMed Central PMCID: PMC7247426.

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Bauer CA, Depireux D, Hertzano R. Tinnitus: Clinical, Basic Science, Audiologic and Industry Updates. Otolaryngol Clin North Am. 2020 Aug;53(4):xvii-xviii. doi: 10.1016/j.otc.2020.04.003. Epub 2020 May 21. PubMed PMID: 32446544.

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Hertzano R, Gwilliam K, Rose K, Milon B, Matern MS. Cell Type-Specific Expression Analysis of the Inner Ear: A Technical Report. Laryngoscope. 2021 Sep;131 Suppl 5(Suppl 5):S1-S16. doi: 10.1002/lary.28765. Epub 2020 Jun 24. PubMed PMID: 32579737; PubMed Central PMCID: PMC8996438.

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Funk CC, Casella AM, Jung S, Richards MA, Rodriguez A, Shannon P, Donovan-Maiye R, Heavner B, Chard K, Xiao Y, Glusman G, Ertekin-Taner N, Golde TE, Toga A, Hood L, Van Horn JD, Kesselman C, Foster I, Madduri R, Price ND, Ament SA. Atlas of Transcription Factor Binding Sites from ENCODE DNase Hypersensitivity Data across 27 Tissue Types. Cell Rep. 2020 Aug 18;32(7):108029. doi: 10.1016/j.celrep.2020.108029. PubMed PMID: 32814038; PubMed Central PMCID: PMC7462736.