My Bibliography

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Yaren O, Moussatche P, Benner SA, inventors. FfAME, assignee. Isothermal Amplification of Oligonucleotides. United States 15826126. 2021 February.

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Yaren O, Benner SA, inventors. FfAME, assignee. Processes to Detect Coronaviruses. United States patent application 16996154. 2020 August.

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Glushakova LG, Alto BW, Kim MS, Bradley A, Yaren O, Benner SA. Detection of chikungunya viral RNA in mosquito bodies on cationic (Q) paper based on innovations in synthetic biology. J Virol Methods. 2017 Aug;246:104-111. doi: 10.1016/j.jviromet.2017.04.013. Epub 2017 Apr 27. PubMed PMID: 28457785; PubMed Central PMCID: PMC5967251.

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Somer M, Yaren O, Reckeweg O, Prots Y, Carrillo-Cabrera W. Ca2[BN2]H: The First Nitridoborate Hydride — Synthesis, Crystal Structure, and Vibrational Spectra. Zeitschrift für anorganische und allgemeine Chemie. 2004; 630(7):1068-1073. doi: 10.1002/zaac.200400086.

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Yang Z, Kim HJ, Le JT, McLendon C, Bradley KM, Kim MS, Hutter D, Hoshika S, Yaren O, Benner SA. Nucleoside analogs to manage sequence divergence in nucleic acid amplification and SNP detection. Nucleic Acids Res. 2018 Jul 6;46(12):5902-5910. doi: 10.1093/nar/gky392. PubMed PMID: 29800323; PubMed Central PMCID: PMC6159519.

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Yaren O, Alto BW, Gangodkar PV, Ranade SR, Patil KN, Bradley KM, Yang Z, Phadke N, Benner SA. Point of sampling detection of Zika virus within a multiplexed kit capable of detecting dengue and chikungunya. BMC Infect Dis. 2017 Apr 20;17(1):293. doi: 10.1186/s12879-017-2382-0. PubMed PMID: 28427352; PubMed Central PMCID: PMC5399334.

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Yaren O, Mosimann M, Leumann CJ. A parallel screen for the discovery of novel DNA base pairs. Angew Chem Int Ed Engl. 2011 Feb 18;50(8):1935-8. doi: 10.1002/anie.201005300. Epub 2011 Jan 21. PubMed PMID: 21328674.

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Yaren O, Alto BW, Bradley KM, Moussatche P, Glushakova L, Benner SA. Multiplexed Isothermal Amplification Based Diagnostic Platform to Detect Zika, Chikungunya, and Dengue 1. J Vis Exp. 2018 Mar 13;(133). doi: 10.3791/57051. PubMed PMID: 29608170; PubMed Central PMCID: PMC5931748.

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Yaren O, Bradley KM, Moussatche P, Hoshika S, Yang Z, Zhu S, Karst SM, Benner SA. A norovirus detection architecture based on isothermal amplification and expanded genetic systems. J Virol Methods. 2016 Nov;237:64-71. doi: 10.1016/j.jviromet.2016.08.012. Epub 2016 Aug 18. PubMed PMID: 27546345.

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Yaren O, Glushakova LG, Bradley KM, Hoshika S, Benner SA. Standard and AEGIS nicking molecular beacons detect amplicons from the Middle East respiratory syndrome coronavirus. J Virol Methods. 2016 Oct;236:54-61. doi: 10.1016/j.jviromet.2016.07.008. Epub 2016 Jul 12. PubMed PMID: 27421627; PubMed Central PMCID: PMC5010982.

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Yaren O, McCarter J, Phadke N, Bradley KM, Overton B, Yang Z, Ranade S, Patil K, Bangale R, Benner SA. Ultra-rapid detection of SARS-CoV-2 in public workspace environments. PLoS One. 2021;16(2):e0240524. doi: 10.1371/journal.pone.0240524. eCollection 2021. PubMed PMID: 33626039; PubMed Central PMCID: PMC7904170.

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Yaren O, Mosimann M, Leumann CJ. Ein paralleles Testverfahren zur Entdeckung neuer DNA-Basenpaare. Angewandte Chemie (Weinheim an der Bergstrasse, Germany). 2011 February; 123(8):1976-1980.

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Yaren O, Röthlisberger P, Leumann CJ. Synthesis and incorporation into oligodeoxynucleotides of carbocyclic exo-amino nucleosides. Synthesis. 2012; 7:1011-1025. doi: 10.1055/s-0031-1289737.

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Yaren O, Benner SA. Restriction enzymes cleave DNA immobilized on micron-sized diamond crystallites. Diamond and related materials. 2015; 52:18-24. doi: 10.1016/j.diamond.2014.11.013.

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Yaren O, McCarter J, Phadke N, Bradley KM, Overton B, Yang Z, Ranade S, Patil K, Bangale R, Benner SA. Ultra-rapid detection of SARS-CoV-2 in public workspace environments. [preprint]. 2020 September. Available from: https://www.medrxiv.org/content/10.1101/2020.09.29.20204131v1. doi: https://doi.org/10.1101/2020.09.29.20204131.