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Monsalve GC, Yamamoto KR, Ward JD. A New Tool for Inducible Gene Expression in Caenorhabditis elegans. Genetics. 2019 Feb;211(2):419-430. doi: 10.1534/genetics.118.301705. Epub 2018 Nov 30. PubMed PMID: 30504365; PubMed Central PMCID: PMC6366904.
Ward JD. Spotlight on CRISPR in Strongyloides Parasitic Nematodes. Trends Parasitol. 2018 Jan;34(1):6-9. doi: 10.1016/j.pt.2017.11.005. Epub 2017 Nov 23. PubMed PMID: 29174224; PubMed Central PMCID: PMC5748261.
Ratnappan R, Ward JD, Yamamoto KR, Ghazi A. Nuclear hormone receptors as mediators of metabolic adaptability following reproductive perturbations. Worm. 2016 Jan-Mar;5(1):e1151609. doi: 10.1080/21624054.2016.1151609. eCollection 2016 Jan-Mar. PubMed PMID: 27073739; PubMed Central PMCID: PMC4805359.
Zhang L, Ward JD, Cheng Z, Dernburg AF. The auxin-inducible degradation (AID) system enables versatile conditional protein depletion in C. elegans. Development. 2015 Dec 15;142(24):4374-84. doi: 10.1242/dev.129635. Epub 2015 Nov 9. PubMed PMID: 26552885; PubMed Central PMCID: PMC4689222.
Ward JD. Rendering the Intractable More Tractable: Tools from Caenorhabditis elegans Ripe for Import into Parasitic Nematodes. Genetics. 2015 Dec;201(4):1279-94. doi: 10.1534/genetics.115.182717. Review. PubMed PMID: 26644478; PubMed Central PMCID: PMC4676526.
Taylor MRG, Špírek M, Chaurasiya KR, Ward JD, Carzaniga R, Yu X, Egelman EH, Collinson LM, Rueda D, Krejci L, Boulton SJ. Rad51 Paralogs Remodel Pre-synaptic Rad51 Filaments to Stimulate Homologous Recombination. Cell. 2015 Jul 16;162(2):271-286. doi: 10.1016/j.cell.2015.06.015. PubMed PMID: 26186187; PubMed Central PMCID: PMC4518479.
Ward JD. Rapid and precise engineering of the Caenorhabditis elegans genome with lethal mutation co-conversion and inactivation of NHEJ repair. Genetics. 2015 Feb;199(2):363-77. doi: 10.1534/genetics.114.172361. Epub 2014 Dec 9. PubMed PMID: 25491644; PubMed Central PMCID: PMC4317648.
Ratnappan R, Amrit FR, Chen SW, Gill H, Holden K, Ward J, Yamamoto KR, Olsen CP, Ghazi A. Germline signals deploy NHR-49 to modulate fatty-acid β-oxidation and desaturation in somatic tissues of C. elegans. PLoS Genet. 2014 Dec;10(12):e1004829. doi: 10.1371/journal.pgen.1004829. eCollection 2014 Dec. PubMed PMID: 25474470; PubMed Central PMCID: PMC4256272.
Ward JD, Yamamoto KR, Asahina M. SUMO as a nuclear hormone receptor effector: New insights into combinatorial transcriptional regulation. Worm. 2014;3:e29317. doi: 10.4161/worm.29317. eCollection 2014. PubMed PMID: 25254154; PubMed Central PMCID: PMC4165532.
Ward JD, Mullaney B, Schiller BJ, He LD, Petnic SE, Couillault C, Pujol N, Bernal TU, Van Gilst MR, Ashrafi K, Ewbank JJ, Yamamoto KR. Defects in the C. elegans acyl-CoA synthase, acs-3, and nuclear hormone receptor, nhr-25, cause sensitivity to distinct, but overlapping stresses. PLoS One. 2014;9(3):e92552. doi: 10.1371/journal.pone.0092552. eCollection 2014. PubMed PMID: 24651852; PubMed Central PMCID: PMC3961378.
Ward JD, Bojanala N, Bernal T, Ashrafi K, Asahina M, Yamamoto KR. Sumoylated NHR-25/NR5A regulates cell fate during C. elegans vulval development. PLoS Genet. 2013;9(12):e1003992. doi: 10.1371/journal.pgen.1003992. Epub 2013 Dec 12. PubMed PMID: 24348269; PubMed Central PMCID: PMC3861103.
Dickinson DJ, Ward JD, Reiner DJ, Goldstein B. Engineering the Caenorhabditis elegans genome using Cas9-triggered homologous recombination. Nat Methods. 2013 Oct;10(10):1028-34. doi: 10.1038/nmeth.2641. Epub 2013 Sep 1. PubMed PMID: 23995389; PubMed Central PMCID: PMC3905680.
O'Neil NJ, Martin JS, Youds JL, Ward JD, Petalcorin MI, Rose AM, Boulton SJ. Joint molecule resolution requires the redundant activities of MUS-81 and XPF-1 during Caenorhabditis elegans meiosis. PLoS Genet. 2013;9(7):e1003582. doi: 10.1371/journal.pgen.1003582. Epub 2013 Jul 18. PubMed PMID: 23874209; PubMed Central PMCID: PMC3715453.
Taubert S, Ward JD, Yamamoto KR. Nuclear hormone receptors in nematodes: evolution and function. Mol Cell Endocrinol. 2011 Mar 1;334(1-2):49-55. doi: 10.1016/j.mce.2010.04.021. Epub 2010 May 10. Review. PubMed PMID: 20438802; PubMed Central PMCID: PMC3042524.
Adamo A, Collis SJ, Adelman CA, Silva N, Horejsi Z, Ward JD, Martinez-Perez E, Boulton SJ, La Volpe A. Preventing nonhomologous end joining suppresses DNA repair defects of Fanconi anemia. Mol Cell. 2010 Jul 9;39(1):25-35. doi: 10.1016/j.molcel.2010.06.026. PubMed PMID: 20598602.
Youds JL, Mets DG, McIlwraith MJ, Martin JS, Ward JD, ONeil NJ, Rose AM, West SC, Meyer BJ, Boulton SJ. RTEL-1 enforces meiotic crossover interference and homeostasis. Science. 2010 Mar 5;327(5970):1254-8. doi: 10.1126/science.1183112. PubMed PMID: 20203049; PubMed Central PMCID: PMC4770885.
Ward JD, Muzzini DM, Petalcorin MI, Martinez-Perez E, Martin JS, Plevani P, Cassata G, Marini F, Boulton SJ. Overlapping mechanisms promote postsynaptic RAD-51 filament disassembly during meiotic double-strand break repair. Mol Cell. 2010 Jan 29;37(2):259-72. doi: 10.1016/j.molcel.2009.12.026. PubMed PMID: 20122407.
Barber LJ, Youds JL, Ward JD, McIlwraith MJ, O'Neil NJ, Petalcorin MI, Martin JS, Collis SJ, Cantor SB, Auclair M, Tissenbaum H, West SC, Rose AM, Boulton SJ. RTEL1 maintains genomic stability by suppressing homologous recombination. Cell. 2008 Oct 17;135(2):261-71. doi: 10.1016/j.cell.2008.08.016. PubMed PMID: 18957201; PubMed Central PMCID: PMC3726190.
Hobson N, Price NL, Ward JD, Raivio TL. Generation of a restriction minus enteropathogenic Escherichia coli E2348/69 strain that is efficiently transformed with large, low copy plasmids. BMC Microbiol. 2008 Aug 5;8:134. doi: 10.1186/1471-2180-8-134. PubMed PMID: 18681975; PubMed Central PMCID: PMC2518929.
Macritchie DM, Ward JD, Nevesinjac AZ, Raivio TL. Activation of the Cpx envelope stress response down-regulates expression of several locus of enterocyte effacement-encoded genes in enteropathogenic Escherichia coli. Infect Immun. 2008 Apr;76(4):1465-75. doi: 10.1128/IAI.01265-07. Epub 2008 Jan 28. PubMed PMID: 18227171; PubMed Central PMCID: PMC2292881.
Adamo A, Montemauri P, Silva N, Ward JD, Boulton SJ, La Volpe A. BRC-1 acts in the inter-sister pathway of meiotic double-strand break repair. EMBO Rep. 2008 Mar;9(3):287-92. doi: 10.1038/sj.embor.7401167. Epub 2008 Jan 25. PubMed PMID: 18219312; PubMed Central PMCID: PMC2267377.
Youds JL, Barber LJ, Ward JD, Collis SJ, O'Neil NJ, Boulton SJ, Rose AM. DOG-1 is the Caenorhabditis elegans BRIP1/FANCJ homologue and functions in interstrand cross-link repair. Mol Cell Biol. 2008 Mar;28(5):1470-9. doi: 10.1128/MCB.01641-07. Epub 2007 Dec 17. PubMed PMID: 18086896; PubMed Central PMCID: PMC2258786.
Goodyer W, Kaitna S, Couteau F, Ward JD, Boulton SJ, Zetka M. HTP-3 links DSB formation with homolog pairing and crossing over during C. elegans meiosis. Dev Cell. 2008 Feb;14(2):263-74. doi: 10.1016/j.devcel.2007.11.016. PubMed PMID: 18267094.
Ward JD, Barber LJ, Petalcorin MI, Yanowitz J, Boulton SJ. Replication blocking lesions present a unique substrate for homologous recombination. EMBO J. 2007 Jul 25;26(14):3384-96. doi: 10.1038/sj.emboj.7601766. Epub 2007 Jul 5. PubMed PMID: 17611606; PubMed Central PMCID: PMC1933397.
Collis SJ, Barber LJ, Clark AJ, Martin JS, Ward JD, Boulton SJ. HCLK2 is essential for the mammalian S-phase checkpoint and impacts on Chk1 stability. Nat Cell Biol. 2007 Apr;9(4):391-401. doi: 10.1038/ncb1555. Epub 2007 Mar 25. PubMed PMID: 17384638.
Collis SJ, Barber LJ, Ward JD, Martin JS, Boulton SJ. C. elegans FANCD2 responds to replication stress and functions in interstrand cross-link repair. DNA Repair (Amst). 2006 Nov 8;5(11):1398-406. doi: 10.1016/j.dnarep.2006.06.010. Epub 2006 Aug 17. PubMed PMID: 16914393.
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