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Zou F, Gelfond JA, Airey DC, Lu L, Manly KF, Williams RW, Threadgill DW. Quantitative trait locus analysis using recombinant inbred intercrosses: theoretical and empirical considerations. Genetics. 2005 Jul;170(3):1299-311. doi: 10.1534/genetics.104.035709. Epub 2005 May 6. PubMed PMID: 15879512; PubMed Central PMCID: PMC1451174.
Saito J, Harris WT, Gelfond J, Noah TL, Leigh MW, Johnson R, Davis SD. Physiologic, bronchoscopic, and bronchoalveolar lavage fluid findings in young children with recurrent wheeze and cough. Pediatr Pulmonol. 2006 Aug;41(8):709-19. doi: 10.1002/ppul.20387. PubMed PMID: 16779841.
Gelfond JA, Ibrahim JG, Zou F. Proximity model for expression quantitative trait loci (eQTL) detection. Biometrics. 2007 Dec;63(4):1108-16. doi: 10.1111/j.1541-0420.2007.00778.x. Epub 2007 Apr 9. PubMed PMID: 17425636.
Beuten J, Gelfond JA, Byrne JJ, Balic I, Crandall AC, Johnson-Pais TL, Thompson IM, Price DK, Leach RJ. CYP1B1 variants are associated with prostate cancer in non-Hispanic and Hispanic Caucasians. Carcinogenesis. 2008 Sep;29(9):1751-7. doi: 10.1093/carcin/bgm300. Epub 2008 Jun 9. PubMed PMID: 18544568; PubMed Central PMCID: PMC2527647.
Nishijo K, Chen QR, Zhang L, McCleish AT, Rodriguez A, Cho MJ, Prajapati SI, Gelfond JA, Chisholm GB, Michalek JE, Aronow BJ, Barr FG, Randall RL, Ladanyi M, Qualman SJ, Rubin BP, LeGallo RD, Wang C, Khan J, Keller C. Credentialing a preclinical mouse model of alveolar rhabdomyosarcoma. Cancer Res. 2009 Apr 1;69(7):2902-11. doi: 10.1158/0008-5472.CAN-08-3723. PubMed PMID: 19339268; PubMed Central PMCID: PMC2789740.
Herrera ML, Vallor AC, Gelfond JA, Patterson TF, Wickes BL. Strain-dependent variation in 18S ribosomal DNA Copy numbers in Aspergillus fumigatus. J Clin Microbiol. 2009 May;47(5):1325-32. doi: 10.1128/JCM.02073-08. Epub 2009 Mar 4. PubMed PMID: 19261786; PubMed Central PMCID: PMC2681831.
Beuten J, Gelfond JA, Franke JL, Weldon KS, Crandall AC, Johnson-Pais TL, Thompson IM, Leach RJ. Single and multigenic analysis of the association between variants in 12 steroid hormone metabolism genes and risk of prostate cancer. Cancer Epidemiol Biomarkers Prev. 2009 Jun;18(6):1869-80. doi: 10.1158/1055-9965.EPI-09-0076. PubMed PMID: 19505920; NIHMSID:NIHMS152842.
Lorenzo C, Nath SD, Hanley AJ, Abboud HE, Gelfond JA, Haffner SM. Risk of type 2 diabetes among individuals with high and low glomerular filtration rates. Diabetologia. 2009 Jul;52(7):1290-7. doi: 10.1007/s00125-009-1361-4. Epub 2009 Apr 15. PubMed PMID: 19367385; PubMed Central PMCID: PMC6685435.
Gifford SM, Eliason JL, Clouse WD, Spencer JR, Burkhardt GE, Propper BW, Dixon PS, Zarzabal LA, Gelfond JA, Rasmussen TE. Early versus delayed restoration of flow with temporary vascular shunt reduces circulating markers of injury in a porcine model. J Trauma. 2009 Aug;67(2):259-65. doi: 10.1097/TA.0b013e3181a5e99b. PubMed PMID: 19667877; PubMed Central PMCID: PMC6685437.
Beuten J, Gelfond JA, Martinez-Fierro ML, Weldon KS, Crandall AC, Rojas-Martinez A, Thompson IM, Leach RJ. Association of chromosome 8q variants with prostate cancer risk in Caucasian and Hispanic men. Carcinogenesis. 2009 Aug;30(8):1372-9. doi: 10.1093/carcin/bgp148. Epub 2009 Jun 15. PubMed PMID: 19528667; PubMed Central PMCID: PMC2718079.
Chen Y, Gelfond JA, McManus LM, Shireman PK. Reproducibility of quantitative RT-PCR array in miRNA expression profiling and comparison with microarray analysis. BMC Genomics. 2009 Aug 28;10:407. doi: 10.1186/1471-2164-10-407. PubMed PMID: 19715577; PubMed Central PMCID: PMC2753550.
Walker JL, Gelfond J, Zarzabal LA, Darling E. Calculating mixed venous saturation during veno-venous extracorporeal membrane oxygenation. Perfusion. 2009 Sep;24(5):333-9. doi: 10.1177/0267659109354790. Epub 2009 Nov 30. PubMed PMID: 19948749; PubMed Central PMCID: PMC2943384.
Gelfond JA, Gupta M, Ibrahim JG. A Bayesian hidden Markov model for motif discovery through joint modeling of genomic sequence and ChIP-chip data. Biometrics. 2009 Dec;65(4):1087-95. doi: 10.1111/j.1541-0420.2008.01180.x. PubMed PMID: 19210737; PubMed Central PMCID: PMC2794970.
Wiggins-Dohlvik K, Stewart RM, Babbitt RJ, Gelfond J, Zarzabal LA, Willis RE. Surgeons' performance during critical situations: competence, confidence, and composure. Am J Surg. 2009 Dec;198(6):817-23. doi: 10.1016/j.amjsurg.2009.04.030. PubMed PMID: 19969135.
Beuten J, Gelfond JA, Franke JL, Shook S, Johnson-Pais TL, Thompson IM, Leach RJ. Single and multivariate associations of MSR1, ELAC2, and RNASEL with prostate cancer in an ethnic diverse cohort of men. Cancer Epidemiol Biomarkers Prev. 2010 Feb;19(2):588-99. doi: 10.1158/1055-9965.EPI-09-0864. Epub 2010 Jan 19. PubMed PMID: 20086112; PubMed Central PMCID: PMC5034730.
Qunibi WY, Abdellatif A, Sankar S, Hamdan Z, Lin FY, Ingle J, Cadena A, Gelfond J, Kasinath B. Treatment of vitamin D deficiency in CKD patients with ergocalciferol: are current K/DOQI treatment guidelines adequate?. Clin Nephrol. 2010 Apr;73(4):276-85. doi: 10.5414/cnp73276. PubMed PMID: 20353735.
O'Donnell L, Soileau B, Heard P, Carter E, Sebold C, Gelfond J, Hale DE, Cody JD. Genetic determinants of autism in individuals with deletions of 18q. Hum Genet. 2010 Aug;128(2):155-64. doi: 10.1007/s00439-010-0839-y. Epub 2010 May 25. PubMed PMID: 20499253.
Gelfond J, Zarzabal LA, Burton T, Burns S, Sogayar M, Penalva LO. LATENT RANK CHANGE DETECTION FOR ANALYSIS OF SPLICE-JUNCTION MICROARRAYS WITH NONLINEAR EFFECTS. Ann Appl Stat. 2011;5(1):364-380. doi: 10.1214/10-AOAS389SUPP. PubMed PMID: 23335951; PubMed Central PMCID: PMC3546815.
Chen Y, Gelfond J, McManus LM, Shireman PK. Temporal microRNA expression during in vitro myogenic progenitor cell proliferation and differentiation: regulation of proliferation by miR-682. Physiol Genomics. 2011 May 1;43(10):621-30. doi: 10.1152/physiolgenomics.00136.2010. Epub 2010 Sep 14. PubMed PMID: 20841498; PubMed Central PMCID: PMC3110887.
Piwkham D, Gelfond JA, Rerkamnuaychoke B, Pakakasama S, Rebel VI, Pollock BH, Winick NJ, Collier AB 3rd, Tomlinson GE, Beuten J. Multilocus association of genetic variants in MLL, CREBBP, EP300, and TOP2A with childhood acute lymphoblastic leukemia in Hispanics from Texas. Cancer Epidemiol Biomarkers Prev. 2011 Jun;20(6):1204-12. doi: 10.1158/1055-9965.EPI-11-0059. Epub 2011 Apr 14. PubMed PMID: 21493871.
Liao CY, Rikke BA, Johnson TE, Gelfond JA, Diaz V, Nelson JF. Fat maintenance is a predictor of the murine lifespan response to dietary restriction. Aging Cell. 2011 Aug;10(4):629-39. doi: 10.1111/j.1474-9726.2011.00702.x. Epub 2011 Apr 25. PubMed PMID: 21388497; PubMed Central PMCID: PMC3685291.
Beuten J, Gelfond JA, Piwkham D, Pollock BH, Winick NJ, Collier AB 3rd, Tomlinson GE. Candidate gene association analysis of acute lymphoblastic leukemia identifies new susceptibility locus at 11p15 (LMO1). Carcinogenesis. 2011 Sep;32(9):1349-53. doi: 10.1093/carcin/bgr091. Epub 2011 May 21. PubMed PMID: 21602560.
Gelfond JA, Heitman E, Pollock BH, Klugman CM. Principles for the ethical analysis of clinical and translational research. Stat Med. 2011 Oct 15;30(23):2785-92. doi: 10.1002/sim.4282. Epub 2011 Jul 12. PubMed PMID: 21751225; PubMed Central PMCID: PMC4465206.
Bokov AF, Garg N, Ikeno Y, Thakur S, Musi N, DeFronzo RA, Zhang N, Erickson RC, Gelfond J, Hubbard GB, Adamo ML, Richardson A. Does reduced IGF-1R signaling in Igf1r+/- mice alter aging?. PLoS One. 2011;6(11):e26891. doi: 10.1371/journal.pone.0026891. Epub 2011 Nov 23. PubMed PMID: 22132081; PubMed Central PMCID: PMC3223158.
Vo DT, Abdelmohsen K, Martindale JL, Qiao M, Tominaga K, Burton TL, Gelfond JA, Brenner AJ, Patel V, Trageser D, Scheffler B, Gorospe M, Penalva LO. The oncogenic RNA-binding protein Musashi1 is regulated by HuR via mRNA translation and stability in glioblastoma cells. Mol Cancer Res. 2012 Jan;10(1):143-55. doi: 10.1158/1541-7786.MCR-11-0208. PubMed PMID: 22258704; PubMed Central PMCID: PMC3265026.
Edrey YH, Casper D, Huchon D, Mele J, Gelfond JA, Kristan DM, Nevo E, Buffenstein R. Sustained high levels of neuregulin-1 in the longest-lived rodents; a key determinant of rodent longevity. Aging Cell. 2012 Apr;11(2):213-22. doi: 10.1111/j.1474-9726.2011.00772.x. Epub 2011 Dec 29. PubMed PMID: 22103690; PubMed Central PMCID: PMC4399559.
Grimes KM, Lindsey ML, Gelfond JA, Buffenstein R. Getting to the heart of the matter: age-related changes in diastolic heart function in the longest-lived rodent, the naked mole rat. J Gerontol A Biol Sci Med Sci. 2012 Apr;67(4):384-94. doi: 10.1093/gerona/glr222. Epub 2012 Feb 24. PubMed PMID: 22367435; PubMed Central PMCID: PMC3309875.
Rawson JM, Kreko T, Davison H, Mahoney R, Bokov A, Chang L, Gelfond J, Macleod GT, Eaton BA. Effects of diet on synaptic vesicle release in dynactin complex mutants: a mechanism for improved vitality during motor disease. Aging Cell. 2012 Jun;11(3):418-27. doi: 10.1111/j.1474-9726.2012.00799.x. Epub 2012 Feb 22. PubMed PMID: 22268717; PubMed Central PMCID: PMC3350605.
Mohamed GH, Gelfond JA, Nicolas MM, Brand TC, Sarvis JA, Leach RJ, Johnson-Pais TL. Genomic characterization of testis cancer: association of alterations with outcome of clinical stage 1 mixed germ cell nonseminomatous germ cell tumor of the testis. Urology. 2012 Aug;80(2):485.e1-5. doi: 10.1016/j.urology.2012.02.026. Epub 2012 Apr 13. PubMed PMID: 22503760.
Chen Y, Melton DW, Gelfond JA, McManus LM, Shireman PK. MiR-351 transiently increases during muscle regeneration and promotes progenitor cell proliferation and survival upon differentiation. Physiol Genomics. 2012 Nov 1;44(21):1042-51. doi: 10.1152/physiolgenomics.00052.2012. Epub 2012 Sep 11. PubMed PMID: 22968638; PubMed Central PMCID: PMC3524771.
Vo DT, Subramaniam D, Remke M, Burton TL, Uren PJ, Gelfond JA, de Sousa Abreu R, Burns SC, Qiao M, Suresh U, Korshunov A, Dubuc AM, Northcott PA, Smith AD, Pfister SM, Taylor MD, Janga SC, Anant S, Vogel C, Penalva LO. The RNA-binding protein Musashi1 affects medulloblastoma growth via a network of cancer-related genes and is an indicator of poor prognosis. Am J Pathol. 2012 Nov;181(5):1762-72. doi: 10.1016/j.ajpath.2012.07.031. Epub 2012 Sep 14. PubMed PMID: 22985791; PubMed Central PMCID: PMC3761132.
Mahesula S, Raphael I, Raghunathan R, Kalsaria K, Kotagiri V, Purkar AB, Anjanappa M, Shah D, Pericherla V, Jadhav YL, Gelfond JA, Forsthuber TG, Haskins WE. Immunoenrichment microwave and magnetic proteomics for quantifying CD47 in the experimental autoimmune encephalomyelitis model of multiple sclerosis. Electrophoresis. 2012 Dec;33(24):3820-9. doi: 10.1002/elps.201200515. PubMed PMID: 23160929; PubMed Central PMCID: PMC3724470.
Raphael I, Mahesula S, Kalsaria K, Kotagiri V, Purkar AB, Anjanappa M, Shah D, Pericherla V, Jadhav YL, Raghunathan R, Vaynberg M, Noriega D, Grimaldo NH, Wenk C, Gelfond JA, Forsthuber TG, Haskins WE. Microwave and magnetic (M(2) ) proteomics of the experimental autoimmune encephalomyelitis animal model of multiple sclerosis. Electrophoresis. 2012 Dec;33(24):3810-9. doi: 10.1002/elps.201200200. PubMed PMID: 23161666; PubMed Central PMCID: PMC3703760.
Raghunathan R, Mahesula S, Kancharla K, Janardhanan P, Jadhav YL, Nadeau R, Villa GP, Cook RL, Witt CM, Gelfond JA, Forsthuber TG, Haskins WE. Anti-CRLF2 Antibody-Armored Biodegradable Nanoparticles for Childhood B-ALL. Part Part Syst Charact. 2013 Apr;30(4):355-364. doi: 10.1002/ppsc.201200125. PubMed PMID: 23976822; PubMed Central PMCID: PMC3746557.
Zhang Y, Ikeno Y, Bokov A, Gelfond J, Jaramillo C, Zhang HM, Liu Y, Qi W, Hubbard G, Richardson A, Van Remmen H. Dietary restriction attenuates the accelerated aging phenotype of Sod1(-/-) mice. Free Radic Biol Med. 2013 Jul;60:300-6. doi: 10.1016/j.freeradbiomed.2013.02.026. Epub 2013 Feb 28. PubMed PMID: 23459073; PubMed Central PMCID: PMC3696984.
Gelfond JA, Ibrahim JG, Gupta M, Chen MH, Cody JD. Differential expression analysis with global network adjustment. BMC Bioinformatics. 2013 Aug 23;14:258. doi: 10.1186/1471-2105-14-258. PubMed PMID: 23968143; PubMed Central PMCID: PMC3766173.
Brandfellner HM, Ruparel SB, Gelfond JA, Hargreaves KM. Major blunt trauma evokes selective upregulation of oxidative enzymes in circulating leukocytes. Shock. 2013 Sep;40(3):182-7. doi: 10.1097/SHK.0b013e31829de02f. PubMed PMID: 23817354; PubMed Central PMCID: PMC3821164.
Daviss WB, O'Donnell L, Soileau BT, Heard P, Carter E, Pliszka SR, Gelfond JA, Hale DE, Cody JD. Mood disorders in individuals with distal 18q deletions. Am J Med Genet B Neuropsychiatr Genet. 2013 Dec;162B(8):879-88. doi: 10.1002/ajmg.b.32197. Epub 2013 Sep 4. PubMed PMID: 24006251.
Gelfond JA, Klugman CM, Welty LJ, Heitman E, Louden C, Pollock BH. How to Tell the Truth with Statistics: The Case for Accountable Data Analyses in Team-based Science. J Transl Med Epidemiol. 2014;2(2). PubMed PMID: 26290897; PubMed Central PMCID: PMC4539260.
Blackburn A, Wilson D, Gelfond J, Yao L, Hernandez J, Thompson IM, Leach RJ, Lehman DM. Validation of copy number variants associated with prostate cancer risk and prognosis. Urol Oncol. 2014 Jan;32(1):44.e15-44.e20. doi: 10.1016/j.urolonc.2013.06.004. Epub 2013 Sep 17. PubMed PMID: 24054869; PubMed Central PMCID: PMC4105226.
Zhang Y, Bokov A, Gelfond J, Soto V, Ikeno Y, Hubbard G, Diaz V, Sloane L, Maslin K, Treaster S, Réndon S, van Remmen H, Ward W, Javors M, Richardson A, Austad SN, Fischer K. Rapamycin extends life and health in C57BL/6 mice. J Gerontol A Biol Sci Med Sci. 2014 Feb;69(2):119-30. doi: 10.1093/gerona/glt056. Epub 2013 May 16. PubMed PMID: 23682161; PubMed Central PMCID: PMC4038246.
Weiner M, Egelund EF, Engle M, Kiser M, Prihoda TJ, Gelfond JA, Mac Kenzie W, Peloquin CA. Pharmacokinetic interaction of rifapentine and raltegravir in healthy volunteers. J Antimicrob Chemother. 2014 Apr;69(4):1079-85. doi: 10.1093/jac/dkt483. Epub 2013 Dec 15. PubMed PMID: 24343893; PubMed Central PMCID: PMC4014856.
Fok WC, Bokov A, Gelfond J, Yu Z, Zhang Y, Doderer M, Chen Y, Javors M, Wood WH 3rd, Zhang Y, Becker KG, Richardson A, Pérez VI. Combined treatment of rapamycin and dietary restriction has a larger effect on the transcriptome and metabolome of liver. Aging Cell. 2014 Apr;13(2):311-9. doi: 10.1111/acel.12175. Epub 2013 Dec 5. PubMed PMID: 24304444; PubMed Central PMCID: PMC3989927.
Ramirez VI, Miller E, Meireles CL, Gelfond J, Krummel DA, Powell TL. Adiponectin and IGFBP-1 in the development of gestational diabetes in obese mothers. BMJ Open Diabetes Res Care. 2014;2(1):e000010. doi: 10.1136/bmjdrc-2013-000010. eCollection 2014. PubMed PMID: 25452858; PubMed Central PMCID: PMC4212565.
Perry BP, Sebold C, Hasi M, Heard P, Carter E, Hill A, Gelfond J, Hale DE, Cody JD. Sensorineural hearing loss in people with deletions of 18q: hearing in 18q-. Otol Neurotol. 2014 Jun;35(5):782-6. doi: 10.1097/MAO.0000000000000363. PubMed PMID: 24662633; PubMed Central PMCID: PMC4170734.
Evans TM, Van Remmen H, Purkar A, Mahesula S, Gelfond JA, Sabia M, Qi W, Lin AL, Jaramillo CA, Haskins WE. Microwave & Magnetic (M(2)) Proteomics of a Mouse Model of Mild Traumatic Brain Injury. Transl Proteom. 2014 Jun 1;3:10-21. doi: 10.1016/j.trprot.2014.03.002. PubMed PMID: 26157646; PubMed Central PMCID: PMC4492171.
Weiner M, Savic RM, Kenzie WR, Wing D, Peloquin CA, Engle M, Bliven E, Prihoda TJ, Gelfond JA, Scott NA, Abdel-Rahman SM, Kearns GL, Burman WJ, Sterling TR, Villarino ME. Rifapentine Pharmacokinetics and Tolerability in Children and Adults Treated Once Weekly With Rifapentine and Isoniazid for Latent Tuberculosis Infection. J Pediatric Infect Dis Soc. 2014 Jun;3(2):132-45. doi: 10.1093/jpids/pit077. Epub 2014 Jan 16. PubMed PMID: 26625366.
Egelund EF, Weiner M, Singh RP, Prihoda TJ, Gelfond JA, Derendorf H, Mac Kenzie WR, Peloquin CA. Protein binding of rifapentine and its 25-desacetyl metabolite in patients with pulmonary tuberculosis. Antimicrob Agents Chemother. 2014 Aug;58(8):4904-10. doi: 10.1128/AAC.01730-13. Epub 2014 May 19. PubMed PMID: 24841270; PubMed Central PMCID: PMC4136068.
Raphael I, Mahesula S, Purkar A, Black D, Catala A, Gelfond JA, Forsthuber TG, Haskins WE. Microwave & magnetic (M2) proteomics reveals CNS-specific protein expression waves that precede clinical symptoms of experimental autoimmune encephalomyelitis. Sci Rep. 2014 Sep 3;4:6210. doi: 10.1038/srep06210. PubMed PMID: 25182730; PubMed Central PMCID: PMC4152753.
Meyer AD, Gelfond JA, Wiles AA, Freishtat RJ, Rais-Bahrami K. Platelet-derived microparticles generated by neonatal extracorporeal membrane oxygenation systems. ASAIO J. 2015 Jan-Feb;61(1):37-42. doi: 10.1097/MAT.0000000000000164. PubMed PMID: 25303795; PubMed Central PMCID: PMC4628788.
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