My Bibliography

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Adam CD, Mirzakhalili E, Gagnon KG, Cottone C, Arena JD, Ulyanova AV, Johnson VE, Wolf JA. Disrupted Hippocampal Theta-Gamma Coupling and Spike-Field Coherence Following Experimental Traumatic Brain Injury. bioRxiv. 2024 Sep 12;. doi: 10.1101/2024.05.30.596704. PubMed PMID: 39314320; PubMed Central PMCID: PMC11418945.

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Harary PM, Jgamadze D, Kim J, Wolf JA, Song H, Ming GL, Cullen DK, Chen HI. Cell Replacement Therapy for Brain Repair: Recent Progress and Remaining Challenges for Treating Parkinson's Disease and Cortical Injury. Brain Sci. 2023 Nov 29;13(12). doi: 10.3390/brainsci13121654. Review. PubMed PMID: 38137103; PubMed Central PMCID: PMC10741697.

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Lu Y, Lee J, Li J, Allu SR, Wang J, Kim H, Bullaughey KL, Fisher SA, Nordgren CE, Rosario JG, Anderson SA, Ulyanova AV, Brem S, Chen HI, Wolf JA, Grady MS, Vinogradov SA, Kim J, Eberwine J. CHEX-seq detects single-cell genomic single-stranded DNA with catalytical potential. Nat Commun. 2023 Nov 14;14(1):7346. doi: 10.1038/s41467-023-43158-6. PubMed PMID: 37963886; PubMed Central PMCID: PMC10645931.

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Ulyanova AV, Adam CD, Cottone C, Maheshwari N, Grovola MR, Fruchet OE, Alamar J, Koch PF, Johnson VE, Cullen DK, Wolf JA. Hippocampal interneuronal dysfunction and hyperexcitability in a porcine model of concussion. Commun Biol. 2023 Nov 9;6(1):1136. doi: 10.1038/s42003-023-05491-w. PubMed PMID: 37945934; PubMed Central PMCID: PMC10636018.

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Harris JP, Mietus CJ, Browne KD, Wofford KL, Keating CE, Brown DP, Johnson BN, Wolf JA, Smith DH, Cohen AS, Duda JE, Cullen DK. Neuronal somatic plasmalemmal permeability and dendritic beading caused by head rotational traumatic brain injury in pigs-An exploratory study. Front Cell Neurosci. 2023;17:1055455. doi: 10.3389/fncel.2023.1055455. eCollection 2023. PubMed PMID: 37519631; PubMed Central PMCID: PMC10381956.

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Eberwine J, Kim J, Anafi RC, Brem S, Bucan M, Fisher SA, Grady MS, Herr AE, Issadore D, Jeong H, Kim H, Lee D, Rubakhin S, Sul JY, Sweedler JV, Wolf JA, Zaret KS, Zou J. Subcellular omics: a new frontier pushing the limits of resolution, complexity and throughput. Nat Methods. 2023 Mar;20(3):331-335. doi: 10.1038/s41592-023-01788-0. PubMed PMID: 36899160; PubMed Central PMCID: PMC10049458.

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Jgamadze D, Lim JT, Zhang Z, Harary PM, Germi J, Mensah-Brown K, Adam CD, Mirzakhalili E, Singh S, Gu JB, Blue R, Dedhia M, Fu M, Jacob F, Qian X, Gagnon K, Sergison M, Fruchet O, Rahaman I, Wang H, Xu F, Xiao R, Contreras D, Wolf JA, Song H, Ming GL, Chen HI. Structural and functional integration of human forebrain organoids with the injured adult rat visual system. Cell Stem Cell. 2023 Feb 2;30(2):137-152.e7. doi: 10.1016/j.stem.2023.01.004. PubMed PMID: 36736289; PubMed Central PMCID: PMC9926224.

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Smith DH, Burrell JC, Browne KD, Katiyar KS, Ezra MI, Dutton JL, Morand JP, Struzyna LA, Laimo FA, Chen HI, Wolf JA, Kaplan HM, Rosen JM, Ledebur HC, Zager EL, Ali ZS, Cullen DK. Tissue-engineered grafts exploit axon-facilitated axon regeneration and pathway protection to enable recovery after 5-cm nerve defects in pigs. Sci Adv. 2022 Nov 4;8(44):eabm3291. doi: 10.1126/sciadv.abm3291. Epub 2022 Nov 4. PubMed PMID: 36332027; PubMed Central PMCID: PMC9635828.

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Driscoll N, Erickson B, Murphy BB, Richardson AG, Robbins G, Apollo NV, Mentzelopoulos G, Mathis T, Hantanasirisakul K, Bagga P, Gullbrand SE, Sergison M, Reddy R, Wolf JA, Chen HI, Lucas TH, Dillingham TR, Davis KA, Gogotsi Y, Medaglia JD, Vitale F. MXene-infused bioelectronic interfaces for multiscale electrophysiology and stimulation. Sci Transl Med. 2021 Sep 22;13(612):eabf8629. doi: 10.1126/scitranslmed.abf8629. Epub 2021 Sep 22. PubMed PMID: 34550728; PubMed Central PMCID: PMC8722432.

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Grovola MR, Paleologos N, Brown DP, Tran N, Wofford KL, Harris JP, Browne KD, Shewokis PA, Wolf JA, Cullen DK, Duda JE. Diverse changes in microglia morphology and axonal pathology during the course of 1 year after mild traumatic brain injury in pigs. Brain Pathol. 2021 Sep;31(5):e12953. doi: 10.1111/bpa.12953. Epub 2021 May 7. PubMed PMID: 33960556; PubMed Central PMCID: PMC8412066.

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Galanopoulou AS, Löscher W, Lubbers L, O'Brien TJ, Staley K, Vezzani A, D'Ambrosio R, White HS, Sontheimer H, Wolf JA, Twyman R, Whittemore V, Wilcox KS, Klein B. Antiepileptogenesis and disease modification: Progress, challenges, and the path forward-Report of the Preclinical Working Group of the 2018 NINDS-sponsored antiepileptogenesis and disease modification workshop. Epilepsia Open. 2021 Jun;6(2):276-296. doi: 10.1002/epi4.12490. Epub 2021 May 6. PubMed PMID: 34033232; PubMed Central PMCID: PMC8166793.

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Adewole DO, Struzyna LA, Burrell JC, Harris JP, Nemes AD, Petrov D, Kraft RH, Chen HI, Serruya MD, Wolf JA, Cullen DK. Development of optically controlled "living electrodes" with long-projecting axon tracts for a synaptic brain-machine interface. Sci Adv. 2021 Jan;7(4). doi: 10.1126/sciadv.aay5347. Print 2021 Jan. PubMed PMID: 33523957; PubMed Central PMCID: PMC10670819.

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Burrell JC, Browne KD, Dutton JL, Laimo FA, Das S, Brown DP, Roberts S, Petrov D, Ali Z, Ledebur HC, Rosen JM, Kaplan HM, Wolf JA, Smith DH, Chen HI, Cullen DK. A Porcine Model of Peripheral Nerve Injury Enabling Ultra-Long Regenerative Distances: Surgical Approach, Recovery Kinetics, and Clinical Relevance. Neurosurgery. 2020 Sep 15;87(4):833-846. doi: 10.1093/neuros/nyaa106. PubMed PMID: 32392341.

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Koch PF, Cottone C, Adam CD, Ulyanova AV, Russo RJ, Weber MT, Arena JD, Johnson VE, Wolf JA. Traumatic Brain Injury Preserves Firing Rates But Disrupts Laminar Oscillatory Coupling and Neuronal Entrainment in Hippocampal CA1. eNeuro. 2020 Sep/Oct;7(5). doi: 10.1523/ENEURO.0495-19.2020. Print 2020 Sep/Oct. PubMed PMID: 32737188; PubMed Central PMCID: PMC7477953.

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Jgamadze D, Johnson VE, Wolf JA, Cullen DK, Song H, Ming GL, Smith DH, Chen HI. Modeling traumatic brain injury with human brain organoids. Curr Opin Biomed Eng. 2020 Jun;14:52-58. doi: 10.1016/j.cobme.2020.05.004. PubMed PMID: 35434439; PubMed Central PMCID: PMC9009274.

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Qian X, Su Y, Adam CD, Deutschmann AU, Pather SR, Goldberg EM, Su K, Li S, Lu L, Jacob F, Nguyen PTT, Huh S, Hoke A, Swinford-Jackson SE, Wen Z, Gu X, Pierce RC, Wu H, Briand LA, Chen HI, Wolf JA, Song H, Ming GL. Sliced Human Cortical Organoids for Modeling Distinct Cortical Layer Formation. Cell Stem Cell. 2020 May 7;26(5):766-781.e9. doi: 10.1016/j.stem.2020.02.002. Epub 2020 Mar 5. PubMed PMID: 32142682; PubMed Central PMCID: PMC7366517.

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Grovola MR, Paleologos N, Wofford KL, Harris JP, Browne KD, Johnson V, Duda JE, Wolf JA, Cullen DK. Mossy cell hypertrophy and synaptic changes in the hilus following mild diffuse traumatic brain injury in pigs. J Neuroinflammation. 2020 Jan 31;17(1):44. doi: 10.1186/s12974-020-1720-0. PubMed PMID: 32005260; PubMed Central PMCID: PMC6993507.

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Harris JP, Burrell JC, Struzyna LA, Chen HI, Serruya MD, Wolf JA, Duda JE, Cullen DK. Emerging regenerative medicine and tissue engineering strategies for Parkinson's disease. NPJ Parkinsons Dis. 2020;6:4. doi: 10.1038/s41531-019-0105-5. eCollection 2020. Review. PubMed PMID: 31934611; PubMed Central PMCID: PMC6949278.

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Chen HI, Wolf JA, Blue R, Song MM, Moreno JD, Ming GL, Song H. Transplantation of Human Brain Organoids: Revisiting the Science and Ethics of Brain Chimeras. Cell Stem Cell. 2019 Oct 3;25(4):462-472. doi: 10.1016/j.stem.2019.09.002. Review. PubMed PMID: 31585092; PubMed Central PMCID: PMC7180006.

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Chen HI, Jgamadze D, Lim J, Mensah-Brown K, Wolf JA, Mills JA, Smith DH. Functional Cortical Axon Tracts Generated from Human Stem Cell-Derived Neurons. Tissue Eng Part A. 2019 May;25(9-10):736-745. doi: 10.1089/ten.TEA.2018.0270. Epub 2019 Mar 29. PubMed PMID: 30648482; PubMed Central PMCID: PMC6535960.

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Weber MT, Arena JD, Xiao R, Wolf JA, Johnson VE. CLARITY reveals a more protracted temporal course of axon swelling and disconnection than previously described following traumatic brain injury. Brain Pathol. 2019 May;29(3):437-450. doi: 10.1111/bpa.12677. Epub 2018 Dec 27. PubMed PMID: 30444552; PubMed Central PMCID: PMC6482960.

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Ulyanova AV, Cottone C, Adam CD, Gagnon KG, Cullen DK, Holtzman T, Jamieson BG, Koch PF, Chen HI, Johnson VE, Wolf JA. Multichannel Silicon Probes for Awake Hippocampal Recordings in Large Animals. Front Neurosci. 2019;13:397. doi: 10.3389/fnins.2019.00397. eCollection 2019. PubMed PMID: 31080400; PubMed Central PMCID: PMC6497800.

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Adewole DO, Serruya MD, Wolf JA, Cullen DK. Bioactive Neuroelectronic Interfaces. Front Neurosci. 2019;13:269. doi: 10.3389/fnins.2019.00269. eCollection 2019. Review. PubMed PMID: 30983957; PubMed Central PMCID: PMC6449725.

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Ulyanova AV, Koch PF, Cottone C, Grovola MR, Adam CD, Browne KD, Weber MT, Russo RJ, Gagnon KG, Smith DH, Isaac Chen H, Johnson VE, Kacy Cullen D, Wolf JA. Electrophysiological Signature Reveals Laminar Structure of the Porcine Hippocampus. eNeuro. 2018 Sep-Oct;5(5). doi: 10.1523/ENEURO.0102-18.2018. eCollection 2018 Sep-Oct. PubMed PMID: 30229132; PubMed Central PMCID: PMC6142048.

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Struzyna LA, Browne KD, Brodnik ZD, Burrell JC, Harris JP, Chen HI, Wolf JA, Panzer KV, Lim J, Duda JE, España RA, Cullen DK. Tissue engineered nigrostriatal pathway for treatment of Parkinson's disease. J Tissue Eng Regen Med. 2018 Jul;12(7):1702-1716. doi: 10.1002/term.2698. Epub 2018 Jun 3. PubMed PMID: 29766664; PubMed Central PMCID: PMC6416379.

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Serruya MD, Harris JP, Adewole DO, Struzyna LA, Burrell JC, Nemes A, Petrov D, Kraft RH, Chen HI, Wolf JA, Cullen DK. Engineered Axonal Tracts as "Living Electrodes" for Synaptic-Based Modulation of Neural Circuitry. Adv Funct Mater. 2018 Mar 21;28(12). doi: 10.1002/adfm.201701183. Epub 2017 Sep 4. PubMed PMID: 34045935; PubMed Central PMCID: PMC8152180.

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Morris J, Na YJ, Zhu H, Lee JH, Giang H, Ulyanova AV, Baltuch GH, Brem S, Chen HI, Kung DK, Lucas TH, O'Rourke DM, Wolf JA, Grady MS, Sul JY, Kim J, Eberwine J. Pervasive within-Mitochondrion Single-Nucleotide Variant Heteroplasmy as Revealed by Single-Mitochondrion Sequencing. Cell Rep. 2017 Dec 5;21(10):2706-2713. doi: 10.1016/j.celrep.2017.11.031. PubMed PMID: 29212019; PubMed Central PMCID: PMC5771502.

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Wolf JA, Johnson BN, Johnson VE, Putt ME, Browne KD, Mietus CJ, Brown DP, Wofford KL, Smith DH, Grady MS, Cohen AS, Cullen DK. Concussion Induces Hippocampal Circuitry Disruption in Swine. J Neurotrauma. 2017 Jul 15;34(14):2303-2314. doi: 10.1089/neu.2016.4848. Epub 2017 May 4. PubMed PMID: 28298170; PubMed Central PMCID: PMC5510797.

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Chen HI, Wolf JA, Smith DH. Multichannel activity propagation across an engineered axon network. J Neural Eng. 2017 Apr;14(2):026016. doi: 10.1088/1741-2552/aa5ccd. Epub 2017 Jan 31. PubMed PMID: 28140365; PubMed Central PMCID: PMC5417339.

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Wofford KL, Harris JP, Browne KD, Brown DP, Grovola MR, Mietus CJ, Wolf JA, Duda JE, Putt ME, Spiller KL, Cullen DK. Rapid neuroinflammatory response localized to injured neurons after diffuse traumatic brain injury in swine. Exp Neurol. 2017 Apr;290:85-94. doi: 10.1016/j.expneurol.2017.01.004. Epub 2017 Jan 9. PubMed PMID: 28081963; PubMed Central PMCID: PMC5529036.

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Spaethling JM, Na YJ, Lee J, Ulyanova AV, Baltuch GH, Bell TJ, Brem S, Chen HI, Dueck H, Fisher SA, Garcia MP, Khaladkar M, Kung DK, Lucas TH Jr, O'Rourke DM, Stefanik D, Wang J, Wolf JA, Bartfai T, Grady MS, Sul JY, Kim J, Eberwine JH. Primary Cell Culture of Live Neurosurgically Resected Aged Adult Human Brain Cells and Single Cell Transcriptomics. Cell Rep. 2017 Jan 17;18(3):791-803. doi: 10.1016/j.celrep.2016.12.066. PubMed PMID: 28099855; PubMed Central PMCID: PMC5316103.

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Wolf JA, Koch PF. Disruption of Network Synchrony and Cognitive Dysfunction After Traumatic Brain Injury. Front Syst Neurosci. 2016;10:43. doi: 10.3389/fnsys.2016.00043. eCollection 2016. PubMed PMID: 27242454; PubMed Central PMCID: PMC4868948.

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Chen HI, Jgamadze D, Serruya MD, Cullen DK, Wolf JA, Smith DH. Neural Substrate Expansion for the Restoration of Brain Function. Front Syst Neurosci. 2016;10:1. doi: 10.3389/fnsys.2016.00001. eCollection 2016. Review. PubMed PMID: 26834579; PubMed Central PMCID: PMC4724716.

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Adewole DO, Serruya MD, Harris JP, Burrell JC, Petrov D, Chen HI, Wolf JA, Cullen DK. The Evolution of Neuroprosthetic Interfaces. Crit Rev Biomed Eng. 2016;44(1-2):123-52. doi: 10.1615/CritRevBiomedEng.2016017198. Review. PubMed PMID: 27652455; PubMed Central PMCID: PMC5541680.

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Cullen DK, Harris JP, Browne KD, Wolf JA, Duda JE, Meaney DF, Margulies SS, Smith DH. A Porcine Model of Traumatic Brain Injury via Head Rotational Acceleration. Methods Mol Biol. 2016;1462:289-324. doi: 10.1007/978-1-4939-3816-2_17. PubMed PMID: 27604725; PubMed Central PMCID: PMC5553045.

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Struzyna LA, Wolf JA, Mietus CJ, Adewole DO, Chen HI, Smith DH, Cullen DK. Rebuilding Brain Circuitry with Living Micro-Tissue Engineered Neural Networks. Tissue Eng Part A. 2015 Nov;21(21-22):2744-56. doi: 10.1089/ten.TEA.2014.0557. Epub 2015 Oct 23. PubMed PMID: 26414439; PubMed Central PMCID: PMC4652241.

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Moyer JT, Halterman BL, Finkel LH, Wolf JA. Lateral and feedforward inhibition suppress asynchronous activity in a large, biophysically-detailed computational model of the striatal network. Front Comput Neurosci. 2014;8:152. doi: 10.3389/fncom.2014.00152. eCollection 2014. PubMed PMID: 25505406; PubMed Central PMCID: PMC4243567.

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Lovatt D, Ruble BK, Lee J, Dueck H, Kim TK, Fisher S, Francis C, Spaethling JM, Wolf JA, Grady MS, Ulyanova AV, Yeldell SB, Griepenburg JC, Buckley PT, Kim J, Sul JY, Dmochowski IJ, Eberwine J. Transcriptome in vivo analysis (TIVA) of spatially defined single cells in live tissue. Nat Methods. 2014 Feb;11(2):190-6. doi: 10.1038/nmeth.2804. Epub 2014 Jan 12. PubMed PMID: 24412976; PubMed Central PMCID: PMC3964595.

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Halpern CH, Tekriwal A, Santollo J, Keating JG, Wolf JA, Daniels D, Bale TL. Amelioration of binge eating by nucleus accumbens shell deep brain stimulation in mice involves D2 receptor modulation. J Neurosci. 2013 Apr 24;33(17):7122-9. doi: 10.1523/JNEUROSCI.3237-12.2013. PubMed PMID: 23616522; PubMed Central PMCID: PMC3703148.

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Halpern CH, Wolf JA, Jaggi JL, Grady MS. Response. J Neurosurg. 2013 Feb;118(2):487. PubMed PMID: 23495377.

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Cullen DK, Tang-Schomer MD, Struzyna LA, Patel AR, Johnson VE, Wolf JA, Smith DH. Microtissue engineered constructs with living axons for targeted nervous system reconstruction. Tissue Eng Part A. 2012 Nov;18(21-22):2280-9. doi: 10.1089/ten.TEA.2011.0534. Epub 2012 Aug 17. PubMed PMID: 22702955; PubMed Central PMCID: PMC3482875.

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Stephen JH, Halpern CH, Barrios CJ, Balmuri U, Pisapia JM, Wolf JA, Kampman KM, Baltuch GH, Caplan AL, Stein SC. Deep brain stimulation compared with methadone maintenance for the treatment of heroin dependence: a threshold and cost-effectiveness analysis. Addiction. 2012 Mar;107(3):624-34. doi: 10.1111/j.1360-0443.2011.03656.x. Review. PubMed PMID: 21919988.

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Halpern CH, Torres N, Hurtig HI, Wolf JA, Stephen J, Oh MY, Williams NN, Dichter MA, Jaggi JL, Caplan AL, Kampman KM, Wadden TA, Whiting DM, Baltuch GH. Expanding applications of deep brain stimulation: a potential therapeutic role in obesity and addiction management. Acta Neurochir (Wien). 2011 Dec;153(12):2293-306. doi: 10.1007/s00701-011-1166-3. Review. PubMed PMID: 21976235.

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Cullen DK, Browne KD, Xu Y, Adeeb S, Wolf JA, McCarron RM, Yang S, Chavko M, Smith DH. Blast-induced color change in photonic crystals corresponds with brain pathology. J Neurotrauma. 2011 Nov;28(11):2307-18. doi: 10.1089/neu.2011.1718. PubMed PMID: 22082449; PubMed Central PMCID: PMC3218413.

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Cullen DK, Wolf JA, Smith DH, Pfister BJ. Neural tissue engineering for neuroregeneration and biohybridized interface microsystems in vivo (Part 2). Crit Rev Biomed Eng. 2011;39(3):241-59. doi: 10.1615/critrevbiomedeng.v39.i3.40. Review. PubMed PMID: 21967304.

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Cullen DK, Wolf JA, Vernekar VN, Vukasinovic J, LaPlaca MC. Neural tissue engineering and biohybridized microsystems for neurobiological investigation in vitro (Part 1). Crit Rev Biomed Eng. 2011;39(3):201-40. doi: 10.1615/critrevbiomedeng.v39.i3.30. Review. PubMed PMID: 21967303.

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Ishikawa M, Mu P, Moyer JT, Wolf JA, Quock RM, Davies NM, Hu XT, Schlüter OM, Dong Y. Homeostatic synapse-driven membrane plasticity in nucleus accumbens neurons. J Neurosci. 2009 May 6;29(18):5820-31. doi: 10.1523/JNEUROSCI.5703-08.2009. PubMed PMID: 19420249; PubMed Central PMCID: PMC2743333.

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Wolf JA, Finkel LH, Contreras D. Sublinear summation of afferent inputs to the nucleus accumbens in the awake rat. J Physiol. 2009 Apr 15;587(Pt 8):1695-704. doi: 10.1113/jphysiol.2008.168369. Epub 2009 Feb 16. PubMed PMID: 19221123; PubMed Central PMCID: PMC2683957.

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Halpern CH, Wolf JA, Bale TL, Stunkard AJ, Danish SF, Grossman M, Jaggi JL, Grady MS, Baltuch GH. Deep brain stimulation in the treatment of obesity. J Neurosurg. 2008 Oct;109(4):625-34. doi: 10.3171/JNS/2008/109/10/0625. Review. PubMed PMID: 18826348.

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Moyer JT, Wolf JA, Finkel LH. Effects of dopaminergic modulation on the integrative properties of the ventral striatal medium spiny neuron. J Neurophysiol. 2007 Dec;98(6):3731-48. doi: 10.1152/jn.00335.2007. Epub 2007 Oct 3. PubMed PMID: 17913980.