My Bibliography

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Koundinyan SP, Baron CA, Malavé MO, Ong F, Addy NO, Cheng JY, Yang PC, Hu BS, Nishimura DG. High-resolution, respiratory-resolved coronary MRA using a Phyllotaxis-reordered variable-density 3D cones trajectory. Magn Reson Imaging. 2023 May;98:140-148. doi: 10.1016/j.mri.2023.01.008. Epub 2023 Jan 14. PubMed PMID: 36646397; PubMed Central PMCID: PMC9991864.

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Malavé MO, Baron CA, Koundinyan SP, Sandino CM, Ong F, Cheng JY, Nishimura DG. Reconstruction of undersampled 3D non-Cartesian image-based navigators for coronary MRA using an unrolled deep learning model. Magn Reson Med. 2020 Aug;84(2):800-812. doi: 10.1002/mrm.28177. Epub 2020 Feb 3. PubMed PMID: 32011021; PubMed Central PMCID: PMC8331070.

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Zeng DY, Baron CA, Malavé MO, Kerr AB, Yang PC, Hu BS, Nishimura DG. Combined T(2) -preparation and multidimensional outer volume suppression for coronary artery imaging with 3D cones trajectories. Magn Reson Med. 2020 Jun;83(6):2221-2231. doi: 10.1002/mrm.28057. Epub 2019 Nov 5. PubMed PMID: 31691350; PubMed Central PMCID: PMC7047567.

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Datta A, Nishimura DG, Baron CA. Banding-free balanced SSFP cardiac cine using frequency modulation and phase cycle redundancy. Magn Reson Med. 2019 Nov;82(5):1604-1616. doi: 10.1002/mrm.27815. Epub 2019 Jun 22. PubMed PMID: 31228278; PubMed Central PMCID: PMC7048216.

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Malavé MO, Baron CA, Addy NO, Cheng JY, Yang PC, Hu BS, Nishimura DG. Whole-heart coronary MR angiography using a 3D cones phyllotaxis trajectory. Magn Reson Med. 2019 Feb;81(2):1092-1103. doi: 10.1002/mrm.27475. Epub 2018 Oct 29. PubMed PMID: 30370941; PubMed Central PMCID: PMC6715422.

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Datta A, Cheng JY, Hargreaves BA, Baron CA, Nishimura DG. Mitigation of near-band balanced steady-state free precession through-plane flow artifacts using partial dephasing. Magn Reson Med. 2018 Jun;79(6):2944-2953. doi: 10.1002/mrm.26957. Epub 2017 Oct 10. PubMed PMID: 28994486; PubMed Central PMCID: PMC6820691.

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Baron CA, Dwork N, Pauly JM, Nishimura DG. Rapid compressed sensing reconstruction of 3D non-Cartesian MRI. Magn Reson Med. 2018 May;79(5):2685-2692. doi: 10.1002/mrm.26928. Epub 2017 Sep 23. PubMed PMID: 28940748; PubMed Central PMCID: PMC6755916.

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Baron CA, Nishimura DG. B(0) mapping using rewinding trajectories (BMART). Magn Reson Med. 2017 Aug;78(2):664-669. doi: 10.1002/mrm.26391. Epub 2016 Aug 24. PubMed PMID: 27555219; PubMed Central PMCID: PMC5325829.

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Addy NO, Ingle RR, Luo J, Baron CA, Yang PC, Hu BS, Nishimura DG. 3D image-based navigators for coronary MR angiography. Magn Reson Med. 2017 May;77(5):1874-1883. doi: 10.1002/mrm.26269. Epub 2016 May 13. PubMed PMID: 27174590; PubMed Central PMCID: PMC5849773.

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Luo J, Addy NO, Ingle RR, Baron CA, Cheng JY, Hu BS, Nishimura DG. Nonrigid Motion Correction With 3D Image-Based Navigators for Coronary MR Angiography. Magn Reson Med. 2017 May;77(5):1884-1893. doi: 10.1002/mrm.26273. Epub 2016 May 13. PubMed PMID: 27174673; PubMed Central PMCID: PMC5107365.

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Taviani V, Alley MT, Banerjee S, Nishimura DG, Daniel BL, Vasanawala SS, Hargreaves BA. High-resolution diffusion-weighted imaging of the breast with multiband 2D radiofrequency pulses and a generalized parallel imaging reconstruction. Magn Reson Med. 2017 Jan;77(1):209-220. doi: 10.1002/mrm.26110. Epub 2016 Jan 17. PubMed PMID: 26778549; PubMed Central PMCID: PMC8158261.

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Jordanova KV, Nishimura DG, Kerr AB. Measuring B1 distributions by B1 phase encoding. Magn Reson Med. 2017 Jan;77(1):229-236. doi: 10.1002/mrm.26114. Epub 2016 Jan 17. PubMed PMID: 26778689; PubMed Central PMCID: PMC4947573.

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Banerjee S, Nishimura DG, Shankaranarayanan A, Saritas EU. Reduced field-of-view DWI with robust fat suppression and unrestricted slice coverage using tilted 2D RF excitation. Magn Reson Med. 2016 Dec;76(6):1668-1676. doi: 10.1002/mrm.26405. Epub 2016 Sep 21. PubMed PMID: 27654126.

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Zhang T, Cheng JY, Chen Y, Nishimura DG, Pauly JM, Vasanawala SS. Robust self-navigated body MRI using dense coil arrays. Magn Reson Med. 2016 Jul;76(1):197-205. doi: 10.1002/mrm.25858. Epub 2015 Jul 29. PubMed PMID: 26220204; PubMed Central PMCID: PMC4732937.

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Jordanova KV, Nishimura DG, Kerr AB. Lowering the B1 threshold for improved BEAR B1 mapping. Magn Reson Med. 2016 Mar;75(3):1262-8. doi: 10.1002/mrm.25711. Epub 2015 Apr 4. PubMed PMID: 25846905; PubMed Central PMCID: PMC4950939.

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Toma I, Kim PJ, Dash R, McConnell MV, Nishimura D, Harnish P, Yang PC. Telmisartan in the diabetic murine model of acute myocardial infarction: dual contrast manganese-enhanced and delayed enhancement MRI evaluation of the peri-infarct region. Cardiovasc Diabetol. 2016 Feb 5;15:24. doi: 10.1186/s12933-016-0348-y. PubMed PMID: 26846539; PubMed Central PMCID: PMC4743104.

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Luo J, Addy NO, Ingle RR, Hargreaves BA, Hu BS, Nishimura DG, Shin T. Combined outer volume suppression and T2 preparation sequence for coronary angiography. Magn Reson Med. 2015 Dec;74(6):1632-9. doi: 10.1002/mrm.25575. Epub 2014 Dec 17. PubMed PMID: 25521477; PubMed Central PMCID: PMC4470881.

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Kwon KT, Kerr AB, Wu HH, Hu BS, Brittain JH, Nishimura DG. Non-contrast-enhanced peripheral angiography using a sliding interleaved cylinder acquisition. Magn Reson Med. 2015 Sep;74(3):727-38. doi: 10.1002/mrm.25452. Epub 2014 Sep 9. PubMed PMID: 25203505; PubMed Central PMCID: PMC4362915.

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Addy NO, Ingle RR, Wu HH, Hu BS, Nishimura DG. High-resolution variable-density 3D cones coronary MRA. Magn Reson Med. 2015 Sep;74(3):614-21. doi: 10.1002/mrm.25803. Epub 2015 Jul 14. PubMed PMID: 26172829; PubMed Central PMCID: PMC4545694.

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Ingle RR, Santos JM, Overall WR, McConnell MV, Hu BS, Nishimura DG. Self-gated fat-suppressed cardiac cine MRI. Magn Reson Med. 2015 May;73(5):1764-74. doi: 10.1002/mrm.25291. Epub 2014 May 7. PubMed PMID: 24806049; PubMed Central PMCID: PMC4224643.

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Shin T, Lustig M, Nishimura DG, Hu BS. Rapid single-breath-hold 3D late gadolinium enhancement cardiac MRI using a stack-of-spirals acquisition. J Magn Reson Imaging. 2014 Dec;40(6):1496-502. doi: 10.1002/jmri.24494. Epub 2013 Nov 15. PubMed PMID: 24243575.

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Jordanova KV, Nishimura DG, Kerr AB. B1 estimation using adiabatic refocusing: BEAR. Magn Reson Med. 2014 Nov;72(5):1302-10. doi: 10.1002/mrm.25049. Epub 2013 Nov 22. PubMed PMID: 24272817; PubMed Central PMCID: PMC4031300.

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Saritas EU, Lee D, Çukur T, Shankaranarayanan A, Nishimura DG. Hadamard slice encoding for reduced-FOV diffusion-weighted imaging. Magn Reson Med. 2014 Nov;72(5):1277-90. doi: 10.1002/mrm.25044. Epub 2013 Nov 21. PubMed PMID: 24265013.

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Billingsley KL, Park JM, Josan S, Hurd R, Mayer D, Spielman-Sun E, Nishimura DG, Brooks JD, Spielman D. The feasibility of assessing branched-chain amino acid metabolism in cellular models of prostate cancer with hyperpolarized [1-(13)C]-ketoisocaproate. Magn Reson Imaging. 2014 Sep;32(7):791-5. doi: 10.1016/j.mri.2014.04.015. Epub 2014 Apr 28. PubMed PMID: 24907854; PubMed Central PMCID: PMC4099288.

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Björk M, Ingle RR, Gudmundson E, Stoica P, Nishimura DG, Barral JK. Parameter estimation approach to banding artifact reduction in balanced steady-state free precession. Magn Reson Med. 2014 Sep;72(3):880-92. doi: 10.1002/mrm.24986. Epub 2013 Oct 25. PubMed PMID: 24166591; PubMed Central PMCID: PMC4048656.

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Ingle RR, Wu HH, Addy NO, Cheng JY, Yang PC, Hu BS, Nishimura DG. Nonrigid autofocus motion correction for coronary MR angiography with a 3D cones trajectory. Magn Reson Med. 2014 Aug;72(2):347-61. doi: 10.1002/mrm.24924. Epub 2013 Sep 4. PubMed PMID: 24006292; PubMed Central PMCID: PMC3942375.

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Kwon KT, Wu HH, Shin T, Cukur T, Lustig M, Nishimura DG. Three-dimensional magnetization-prepared imaging using a concentric cylinders trajectory. Magn Reson Med. 2014 May;71(5):1700-10. doi: 10.1002/mrm.24823. Epub 2013 Jul 1. PubMed PMID: 23818212; PubMed Central PMCID: PMC4056679.

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Shin T, Hu BS, Nishimura DG. Off-resonance-robust velocity-selective magnetization preparation for non-contrast-enhanced peripheral MR angiography. Magn Reson Med. 2013 Nov;70(5):1229-40. doi: 10.1002/mrm.24561. Epub 2012 Nov 28. PubMed PMID: 23192893; PubMed Central PMCID: PMC3594489.

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Dong HZ, Worters PW, Wu HH, Ingle RR, Vasanawala SS, Nishimura DG. Noncontrast-enhanced renal angiography using multiple inversion recovery and alternating TR balanced steady-state free precession. Magn Reson Med. 2013 Aug;70(2):527-36. doi: 10.1002/mrm.24480. Epub 2012 Nov 21. PubMed PMID: 23172805; PubMed Central PMCID: PMC4012072.

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Shin T, Worters PW, Hu BS, Nishimura DG. Non-contrast-enhanced renal and abdominal MR angiography using velocity-selective inversion preparation. Magn Reson Med. 2013 May;69(5):1268-75. doi: 10.1002/mrm.24356. Epub 2012 Jun 18. PubMed PMID: 22711643; PubMed Central PMCID: PMC3449049.

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Wu HH, Gurney PT, Hu BS, Nishimura DG, McConnell MV. Free-breathing multiphase whole-heart coronary MR angiography using image-based navigators and three-dimensional cones imaging. Magn Reson Med. 2013 Apr;69(4):1083-93. doi: 10.1002/mrm.24346. Epub 2012 May 30. PubMed PMID: 22648856; PubMed Central PMCID: PMC4080827.

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Shin T, Nayak KS, Santos JM, Nishimura DG, Hu BS, McConnell MV. Three-dimensional first-pass myocardial perfusion MRI using a stack-of-spirals acquisition. Magn Reson Med. 2013 Mar 1;69(3):839-44. doi: 10.1002/mrm.24303. Epub 2012 May 3. PubMed PMID: 22556062; PubMed Central PMCID: PMC4025970.

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Andre JB, Zaharchuk G, Saritas E, Komakula S, Shankaranarayan A, Banerjee S, Rosenberg J, Nishimura DG, Fischbein NJ. Clinical evaluation of reduced field-of-view diffusion-weighted imaging of the cervical and thoracic spine and spinal cord. AJNR Am J Neuroradiol. 2012 Nov;33(10):1860-6. doi: 10.3174/ajnr.A3134. Epub 2012 May 3. PubMed PMID: 22555576; PubMed Central PMCID: PMC7964604.

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Chung J, Dash R, Kee K, Barral JK, Kosuge H, Robbins RC, Nishimura D, Reijo-Pera RA, Yang PC. Theranostic effect of serial manganese-enhanced magnetic resonance imaging of human embryonic stem cell derived teratoma. Magn Reson Med. 2012 Aug;68(2):595-9. doi: 10.1002/mrm.23262. Epub 2011 Dec 21. PubMed PMID: 22190225; PubMed Central PMCID: PMC3321132.

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Addy NO, Wu HH, Nishimura DG. Simple method for MR gradient system characterization and k-space trajectory estimation. Magn Reson Med. 2012 Jul;68(1):120-9. doi: 10.1002/mrm.23217. Epub 2011 Dec 21. PubMed PMID: 22189904; PubMed Central PMCID: PMC4048453.

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Kimm SY, Tarin TV, Lee JH, Hu B, Jensen K, Nishimura D, Brooks JD. Methods for registration of magnetic resonance images of ex vivo prostate specimens with histology. J Magn Reson Imaging. 2012 Jul;36(1):206-12. doi: 10.1002/jmri.23614. Epub 2012 Feb 22. PubMed PMID: 22359365.

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Ingle RR, Cukur T, Nishimura DG. The central signal singularity phenomenon in balanced SSFP and its application to positive-contrast imaging. Magn Reson Med. 2012 Jun;67(6):1673-83. doi: 10.1002/mrm.23156. Epub 2011 Oct 24. PubMed PMID: 22025426; PubMed Central PMCID: PMC4082970.

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Singer L, Wilmes LJ, Saritas EU, Shankaranarayanan A, Proctor E, Wisner DJ, Chang B, Joe BN, Nishimura DG, Hylton NM. High-resolution diffusion-weighted magnetic resonance imaging in patients with locally advanced breast cancer. Acad Radiol. 2012 May;19(5):526-34. doi: 10.1016/j.acra.2011.11.003. Epub 2011 Dec 22. PubMed PMID: 22197382; PubMed Central PMCID: PMC3319166.

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Pauly J, Nishimura D, Macovski A. A k-space analysis of small-tip-angle excitation. 1989. J Magn Reson. 2011 Dec;213(2):544-57. doi: 10.1016/j.jmr.2011.09.023. PubMed PMID: 22152370.

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Pauly JM, Nishimura DG, Macovski A. Introduction to: A k-space analysis of small-tip-angle excitation. J Magn Reson. 2011 Dec;213(2):558-9. doi: 10.1016/j.jmr.2011.08.008. Epub 2011 Sep 3. PubMed PMID: 21890389.

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Chung J, Kee K, Barral JK, Dash R, Kosuge H, Wang X, Weissman I, Robbins RC, Nishimura D, Quertermous T, Reijo-Pera RA, Yang PC. In vivo molecular MRI of cell survival and teratoma formation following embryonic stem cell transplantation into the injured murine myocardium. Magn Reson Med. 2011 Nov;66(5):1374-81. doi: 10.1002/mrm.22929. Epub 2011 May 20. PubMed PMID: 21604295; PubMed Central PMCID: PMC3381354.

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Bangerter NK, Cukur T, Hargreaves BA, Hu BS, Brittain JH, Park D, Gold GE, Nishimura DG. Three-dimensional fluid-suppressed T2-prep flow-independent peripheral angiography using balanced SSFP. Magn Reson Imaging. 2011 Oct;29(8):1119-24. doi: 10.1016/j.mri.2011.04.007. Epub 2011 Jun 25. PubMed PMID: 21705166; PubMed Central PMCID: PMC3172338.

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Dash R, Chung J, Chan T, Yamada M, Barral J, Nishimura D, Yang PC, Simpson PC. A molecular MRI probe to detect treatment of cardiac apoptosis in vivo. Magn Reson Med. 2011 Oct;66(4):1152-62. doi: 10.1002/mrm.22876. Epub 2011 Feb 28. PubMed PMID: 21360750; PubMed Central PMCID: PMC3138815.

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Barral JK, Santos JM, Damrose EJ, Fischbein NJ, Nishimura DG. Real-time motion correction for high-resolution larynx imaging. Magn Reson Med. 2011 Jul;66(1):174-9. doi: 10.1002/mrm.22773. Epub 2011 Feb 24. PubMed PMID: 21695722; PubMed Central PMCID: PMC3383318.

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Zaharchuk G, Saritas EU, Andre JB, Chin CT, Rosenberg J, Brosnan TJ, Shankaranarayan A, Nishimura DG, Fischbein NJ. Reduced field-of-view diffusion imaging of the human spinal cord: comparison with conventional single-shot echo-planar imaging. AJNR Am J Neuroradiol. 2011 May;32(5):813-20. doi: 10.3174/ajnr.A2418. Epub 2011 Mar 31. PubMed PMID: 21454408; PubMed Central PMCID: PMC7965571.

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Çukur T, Lustig M, Saritas EU, Nishimura DG. Signal compensation and compressed sensing for magnetization-prepared MR angiography. IEEE Trans Med Imaging. 2011 May;30(5):1017-27. doi: 10.1109/TMI.2011.2116123. Epub 2011 Feb 17. PubMed PMID: 21335307; PubMed Central PMCID: PMC3156830.

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Cukur T, Shimakawa A, Yu H, Hargreaves BA, Hu BS, Nishimura DG, Brittain JH. Magnetization-prepared IDEAL bSSFP: a flow-independent technique for noncontrast-enhanced peripheral angiography. J Magn Reson Imaging. 2011 Apr;33(4):931-9. doi: 10.1002/jmri.22479. PubMed PMID: 21448960; PubMed Central PMCID: PMC3155993.

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Saritas EU, Lee JH, Nishimura DG. SNR dependence of optimal parameters for apparent diffusion coefficient measurements. IEEE Trans Med Imaging. 2011 Feb;30(2):424-37. doi: 10.1109/TMI.2010.2084583. Epub 2010 Oct 7. PubMed PMID: 20934948.

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Kosuge H, Sherlock SP, Kitagawa T, Terashima M, Barral JK, Nishimura DG, Dai H, McConnell MV. FeCo/graphite nanocrystals for multi-modality imaging of experimental vascular inflammation. PLoS One. 2011 Jan 14;6(1):e14523. doi: 10.1371/journal.pone.0014523. PubMed PMID: 21264237; PubMed Central PMCID: PMC3021517.

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Terashima M, Nguyen PK, Rubin GD, Meyer CH, Shimakawa A, Nishimura DG, Ehara S, Iribarren C, Courtney BK, Go AS, Hlatky MA, Fortmann SP, McConnell MV. Right coronary wall CMR in the older asymptomatic advance cohort: positive remodeling and associations with type 2 diabetes and coronary calcium. J Cardiovasc Magn Reson. 2010 Dec 30;12(1):75. doi: 10.1186/1532-429X-12-75. PubMed PMID: 21192815; PubMed Central PMCID: PMC3022803.