My Bibliography

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Modir N, Shahedi M, Dormer J, Ma L, Fei B. LED-based, real-time, hyperspectral imaging device. J Med Imaging (Bellingham). 2025 May;12(3):035002. doi: 10.1117/1.JMI.12.3.035002. Epub 2025 Jun 12. PubMed PMID: 40521235; PubMed Central PMCID: PMC12162177.

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Reddy VVRK, Villordon M, Do QN, Xi Y, Lewis MA, Herrera CL, Owen D, Spong CY, Twickler DM, Fei B. Ensemble of fine-tuned machine learning models for hysterectomy prediction in pregnant women using magnetic resonance images. J Med Imaging (Bellingham). 2025 Mar;12(2):024502. doi: 10.1117/1.JMI.12.2.024502. Epub 2025 Mar 18. PubMed PMID: 40109885; PubMed Central PMCID: PMC11915718.

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Pruitt K, Pasupuleti H, Yu J, DeAtley W, Fei B. Masked image modeling in medical hyperspectral imaging: reconstruction evaluation and downstream tasks. Proc SPIE Int Soc Opt Eng. 2025 Feb;13407. doi: 10.1117/12.3048802. Epub 2025 Apr 4. PubMed PMID: 41267884; PubMed Central PMCID: PMC12629530.

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Tran MH, Bryarly M, Pruitt K, Ali A, Emordi I, Jahadi A, Fei B. A Dual-Camera High-Resolution Hyperspectral Imaging System for the Retina. Proc SPIE Int Soc Opt Eng. 2025 Feb;13410. Epub 2025 Apr 2. PubMed PMID: 41113906; PubMed Central PMCID: PMC12535261.

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Nawawithan N, Yu J, Pruitt K, Fei B. Novel view synthesis using neural radiance fields for laparoscopic surgery navigation. Proc SPIE Int Soc Opt Eng. 2025 Feb;13408. doi: 10.1117/12.3048817. Epub 2025 Apr 7. PubMed PMID: 41122225; PubMed Central PMCID: PMC12536510.

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Pasupuleti H, Ma L, Guo X, Fei B. A spatial-spectral vision transformer model for head and neck cancer detection with hyperspectral, RGB, and synthesized RGB histologic images. Proc SPIE Int Soc Opt Eng. 2025 Feb;13413. doi: 10.1117/12.3048966. Epub 2025 Apr 10. PubMed PMID: 41480495; PubMed Central PMCID: PMC12753317.

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Ma L, Ha A, Zainab I, Rathgeb A, Mubarak H, Fei B. An automatic processing framework for hyperspectral histologic images and benchmark dataset. Proc SPIE Int Soc Opt Eng. 2025 Feb;13413. doi: 10.1117/12.3047743. Epub 2025 Apr 10. PubMed PMID: 41116765; PubMed Central PMCID: PMC12535475.

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Pruitt K, DeAtley W, Rathgeb A, Johnson B, Gahan J, Fei B. A high-speed hyperspectral imaging system and large-scale hyperspectral dataset for abdominal surgical applications. Proc SPIE Int Soc Opt Eng. 2025 Feb;13408. doi: 10.1117/12.3048439. Epub 2025 Apr 7. PubMed PMID: 41127246; PubMed Central PMCID: PMC12539905.

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Hellman MD, Ma L, Yu J, Fei B. Optimization of Transfer Learning of Foundation Models for Hyperspectral Histologic Imaging. Proc SPIE Int Soc Opt Eng. 2025 Feb;13413. doi: 10.1117/12.3048965. Epub 2025 Apr 10. PubMed PMID: 41112860; PubMed Central PMCID: PMC12534908.

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Bryarly MD, Ha Tran M, Ali A, Fei B. Retina Phantom Model for Hyperspectral Imaging. Proc SPIE Int Soc Opt Eng. 2025 Feb;13408. doi: 10.1117/12.3048963. Epub 2025 Apr 7. PubMed PMID: 41112843; PubMed Central PMCID: PMC12534907.

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Wang J, Jing B, Fei B. Improvement in breast lesion classification utilizing deep learning and treatment response assessment maps (TRAMs). Proc SPIE Int Soc Opt Eng. 2025 Feb;13409. doi: 10.1117/12.3047207. Epub 2025 Apr 10. PubMed PMID: 41111981; PubMed Central PMCID: PMC12535267.

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Truong NCD, Ganesh Bangalore Yogananda C, Wagner BC, Saadat N, Holcomb JM, Reddy D, Lodhi S, Bowerman J, Hatanpaa KJ, Patel TR, Fei B, Lee MD, Jain R, Bruce RJ, Pinho MC, Madhuranthakam AJ, Maldjian JA. Mitigating Data Scarcity in the Classification of Glioma Molecular Subtypes: The Power of Generative Imaging. Proc SPIE Int Soc Opt Eng. 2025 Feb;13411. doi: 10.1117/12.3049114. Epub 2025 Apr 10. PubMed PMID: 41132899; PubMed Central PMCID: PMC12541906.

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Chandan GBY, Bowerman J, Truong NCD, Wagner BC, Reddy DD, Holcomb JM, Saadat N, Hatanpaa KJ, Patel TR, Fei B, Lee MD, Jain R, Bruce RJ, Pinho MC, Madhuranthakam AJ, Maldjian JA. Data Harmonization with StyleTransfer-GANs: Enhancing Non-Invasive IDH Classification in Brain Tumors. Proc SPIE Int Soc Opt Eng. 2025 Feb;13410. doi: 10.1117/12.3049148. Epub 2025 Apr 2. PubMed PMID: 41200077; PubMed Central PMCID: PMC12588573.

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Fei B, Hwang J, Milanič M. Special Section Guest Editorial: JBO Special Section on Hyperspectral Imaging. J Biomed Opt. 2025 Feb;30(2):023501. doi: 10.1117/1.JBO.30.2.023501. Epub 2025 Mar 4. PubMed PMID: 40041427; PubMed Central PMCID: PMC11877005.

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Sherey JC, Ma L, Ha AM, Lane C, Fei B. Validation of a handheld polarized hyperspectral imaging probe on intralipid phantom and mouse tissue. Proc SPIE Int Soc Opt Eng. 2025 Jan;13322. doi: 10.1117/12.3046378. Epub 2025 Mar 19. PubMed PMID: 41113679; PubMed Central PMCID: PMC12534897.

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Do QN, Lewis MA, Herrera CL, Owen D, Spong CY, Fei B, Lenkinski RE, Twickler DM, Xi Y. Magnetic Resonance Imaging-Based Radiomics of Axial and Sagittal Orientation in Pregnant Patients with Suspected Placenta Accreta Spectrum. Acad Radiol. 2025 Mar;32(3):1500-1505. doi: 10.1016/j.acra.2024.09.045. Epub 2024 Oct 4. PubMed PMID: 39366802; PubMed Central PMCID: PMC11915857.

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Olapojoye A, Singh A, Nishi E, Fei B, Nostratinia A, Hassanipour F. Infants Sucking Pattern Identification Using Machine-Learned Computational Modeling. J Eng Sci Med Diagn Ther. 2025 Aug;8(3). doi: 10.1115/1.4066459. Epub 2024 Sep 30. PubMed PMID: 41122661; PubMed Central PMCID: PMC12536482.

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Pruitt K, Ma L, Rathgeb A, Gahan JC, Johnson BA, Strand DW, Fei B. Design and validation of a high-speed hyperspectral laparoscopic imaging system. J Biomed Opt. 2024 Sep;29(9):093506. doi: 10.1117/1.JBO.29.9.093506. Epub 2024 Aug 13. PubMed PMID: 39139794; PubMed Central PMCID: PMC11321365.

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Nayar NU, Desai JP. Ultrasound-Guided Real-Time Joint Space Control of a Robotic Transcatheter Delivery System. IEEE Robot Autom Lett. 2024 Sep;9(9):7677-7684. doi: 10.1109/lra.2024.3426380. Epub 2024 Aug 10. PubMed PMID: 40735629; PubMed Central PMCID: PMC12303083.

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Tran MH, Ma L, Mubarak H, Gomez O, Yu J, Bryarly M, Fei B. Detection and margin assessment of thyroid carcinoma with microscopic hyperspectral imaging using transformer networks. J Biomed Opt. 2024 Sep;29(9):093505. doi: 10.1117/1.JBO.29.9.093505. Epub 2024 Jul 24. PubMed PMID: 39050615; PubMed Central PMCID: PMC11268383.

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Nayar NU, Desai JP. Modeling Non-linear Effects in a 4-DoF Robotic Transcatheter Delivery System. IEEE Robot Autom Lett. 2024 Sep;9(9):7691-7698. doi: 10.1109/lra.2024.3426384. Epub 2024 Jul 10. PubMed PMID: 40747533; PubMed Central PMCID: PMC12308731.

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Truong NCD, Bangalore Yogananda CG, Wagner BC, Holcomb JM, Reddy D, Saadat N, Hatanpaa KJ, Patel TR, Fei B, Lee MD, Jain R, Bruce RJ, Pinho MC, Madhuranthakam AJ, Maldjian JA. Two-Stage Training Framework Using Multicontrast MRI Radiomics for IDH Mutation Status Prediction in Glioma. Radiol Artif Intell. 2024 Jul;6(4):e230218. doi: 10.1148/ryai.230218. PubMed PMID: 38775670; PubMed Central PMCID: PMC11294953.

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Chaudhary S, Akter N, Pathour T, Kian Pour B, Rastegar G, Menon A, Brown KG, Fei B, Hwang M, Sirsi SR. Development and Characterization of Hemoglobin Microbubbles for Acoustic Blood Oxygen Level Dependent Imaging. ACS Sens. 2024 Jun 28;9(6):2826-2835. doi: 10.1021/acssensors.3c02349. Epub 2024 May 24. PubMed PMID: 38787788; PubMed Central PMCID: PMC12831634.

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Ma L, Pruitt K, Fei B. Dual-camera laparoscopic imaging with super-resolution reconstruction for intraoperative hyperspectral image guidance. Proc SPIE Int Soc Opt Eng. 2024 Feb;12928. doi: 10.1117/12.3006573. Epub 2024 Mar 29. PubMed PMID: 38752166; PubMed Central PMCID: PMC11094590.

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Yu J, Pruitt K, Nawawithan N, Johnson BA, Gahan J, Fei B. Dense surface reconstruction using a learning-based monocular vSLAM model for laparoscopic surgery. Proc SPIE Int Soc Opt Eng. 2024 Feb;12928. doi: 10.1117/12.3008768. Epub 2024 Mar 29. PubMed PMID: 38745863; PubMed Central PMCID: PMC11093590.

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Bettati P, Young J, Rathgeb A, Nawawithan N, Gahan J, Johnson B, Aspenleiter R, Browne F, Chaudhari A, Guin A, Sikand V, Webb G, Sherey J, Shammet A, Fei B. An augmented reality-guided biopsy system using a high-speed motion tracking and real-time registration platform. Proc SPIE Int Soc Opt Eng. 2024 Feb;12928. doi: 10.1117/12.3008573. Epub 2024 Mar 29. PubMed PMID: 38708142; PubMed Central PMCID: PMC11069180.

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Nawawithan N, Young J, Bettati P, Rathgeb AP, Pruitt KT, Frimpter J, Kim H, Yu J, Driver D, Shiferaw A, Chaudhari A, Johnson BA, Gahan J, Yu J, Fei B. An augmented reality and high-speed optical tracking system for laparoscopic surgery. Proc SPIE Int Soc Opt Eng. 2024 Feb;12928. doi: 10.1117/12.3008448. Epub 2024 Mar 29. PubMed PMID: 38708143; PubMed Central PMCID: PMC11069178.

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Fraser R, Bettati P, Young J, Rathgeb A, Sirsi S, Fei B. A Fast and Interactive Augmented Reality System for PET/CT-guided Intervention of Neuroblastoma. Proc SPIE Int Soc Opt Eng. 2024 Feb;12928. doi: 10.1117/12.3008663. Epub 2024 Mar 29. PubMed PMID: 38708144; PubMed Central PMCID: PMC11069343.

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Pathour T, Ma L, Strand DW, Gahan J, Johnson BA, Sirsi SR, Fei B. Feature Extraction of Ultrasound Radiofrequency Data for the Classification of the Peripheral Zone of Human Prostate. Proc SPIE Int Soc Opt Eng. 2024 Feb;12932. doi: 10.1117/12.3008643. Epub 2024 Apr 1. PubMed PMID: 38707197; PubMed Central PMCID: PMC11069342.

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Tran MH, Bryarly M, Ma L, Yousuf MS, Price TJ, Fei B. Nerve Detection and Visualization Using Hyperspectral Imaging for Surgical Guidance. Proc SPIE Int Soc Opt Eng. 2024 Feb;12930. doi: 10.1117/12.3008470. Epub 2024 Apr 2. PubMed PMID: 38707637; PubMed Central PMCID: PMC11070131.

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Reddy VVRK, Yogananda CGB, Truong NCD, Madhuranthakam AJ, Maldjian JA, Fei B. GAN-Based Motion Artifact Correction of 3D MR Volumes Using an Image-to-Image Translation Algorithm. Proc SPIE Int Soc Opt Eng. 2024 Feb;12930. doi: 10.1117/12.3007743. Epub 2024 Apr 2. PubMed PMID: 39041007; PubMed Central PMCID: PMC11262355.

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Ma L, Pruitt K, Fei B. A hyperspectral surgical microscope with super-resolution reconstruction for intraoperative image guidance. Proc SPIE Int Soc Opt Eng. 2024 Feb;12930. doi: 10.1117/12.3008789. Epub 2024 Apr 2. PubMed PMID: 38745746; PubMed Central PMCID: PMC11093589.

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Truong NCD, Yogananda CGB, Wagner BC, Holcomb JM, Reddy D, Saadat N, Hatanpaa KJ, Patel TR, Fei B, Lee MD, Jain R, Bruce RJ, Pinho MC, Madhuranthakam AJ, Maldjian JA. Synthesizing 3D Multi-Contrast Brain Tumor MRIs Using Tumor Mask Conditioning. Proc SPIE Int Soc Opt Eng. 2024 Feb;12931. doi: 10.1117/12.3009331. Epub 2024 Apr 2. PubMed PMID: 38715792; PubMed Central PMCID: PMC11075745.

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Mubarak HK, Zhou X, Palsgrove D, Sumer BD, Chen AY, Fei B. An Ensemble Learning Method for Detection of Head and Neck Squamous Cell Carcinoma Using Polarized Hyperspectral Microscopic Imaging. Proc SPIE Int Soc Opt Eng. 2024 Feb;12933. doi: 10.1117/12.3007869. Epub 2024 Apr 3. PubMed PMID: 38711533; PubMed Central PMCID: PMC11073817.

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Do QN, Herrera CL, Rosenthal EA, Xi Y, Uddin N, Lewis MA, Fei B, Spong CY, Twickler DM. Magnetic resonance imaging improves diagnosis of placenta accreta spectrum requiring hysterectomy compared to ultrasound. Am J Obstet Gynecol MFM. 2024 Mar;6(3):101280. doi: 10.1016/j.ajogmf.2024.101280. Epub 2024 Jan 10. PubMed PMID: 38216054; PubMed Central PMCID: PMC11070455.

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Tran MH, Bryarly M, Pruitt K, Ma L, Fei B. A High-Resolution Hyperspectral Imaging System for the Retina. Proc SPIE Int Soc Opt Eng. 2024 Jan-Feb;12836. doi: 10.1117/12.3001647. Epub 2024 Mar 12. PubMed PMID: 38737572; PubMed Central PMCID: PMC11086557.

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Zhou X, Mubarak HK, Kaur J, Dingal PCDP, Fei B. Polarized Hyperspectral Microscopic Imaging for Zebrafish. Proc SPIE Int Soc Opt Eng. 2024 Jan-Feb;12834. doi: 10.1117/12.3007294. Epub 2024 Mar 12. PubMed PMID: 38737328; PubMed Central PMCID: PMC11086558.

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Pruitt K, Modir N, Nawawithan N, Tran M, Fei B. Optimization of a real-time LED based spectral imaging system. Proc SPIE Int Soc Opt Eng. 2024 Jan-Feb;12853. doi: 10.1117/12.3005452. Epub 2024 Mar 12. PubMed PMID: 38741718; PubMed Central PMCID: PMC11090289.

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Pruitt K, Rathgeb A, Gahan JC, Johnson BA, Strand DW, Fei B. A dual-camera hyperspectral laparoscopic imaging system. Proc SPIE Int Soc Opt Eng. 2024 Jan-Feb;12831. doi: 10.1117/12.3005893. Epub 2024 Mar 12. PubMed PMID: 38708175; PubMed Central PMCID: PMC11069412.

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Fei GT, Guo AW, Booth T, Kiss E, Hallac RR, Anderson A, Wang ZJ. Development of an augmented reality system for tracheal intubation guidance of airway management. Proc SPIE Int Soc Opt Eng. 2024 Jan-Feb;12818. doi: 10.1117/12.3007671. Epub 2024 Mar 12. PubMed PMID: 38863654; PubMed Central PMCID: PMC11166008.

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Zhou X, Ma L, Mubarak HK, Palsgrove D, Sumer BD, Chen AY, Fei B. Polarized hyperspectral microscopic imaging system for enhancing the visualization of collagen fibers and head and neck squamous cell carcinoma. J Biomed Opt. 2024 Jan;29(1):016005. doi: 10.1117/1.JBO.29.1.016005. Epub 2024 Jan 18. PubMed PMID: 38239390; PubMed Central PMCID: PMC10795499.

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Bangalore Yogananda CG, Wagner BC, Truong NCD, Holcomb JM, Reddy DD, Saadat N, Hatanpaa KJ, Patel TR, Fei B, Lee MD, Jain R, Bruce RJ, Pinho MC, Madhuranthakam AJ, Maldjian JA. MRI-Based Deep Learning Method for Classification of IDH Mutation Status. Bioengineering (Basel). 2023 Sep 5;10(9). doi: 10.3390/bioengineering10091045. PubMed PMID: 37760146; PubMed Central PMCID: PMC10525372.

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Herrera CL, Kim MJ, Do QN, Owen DM, Fei B, Twickler DM, Spong CY. The human placenta project: Funded studies, imaging technologies, and future directions. Placenta. 2023 Oct;142:27-35. doi: 10.1016/j.placenta.2023.08.067. Epub 2023 Aug 21. Review. PubMed PMID: 37634371; PubMed Central PMCID: PMC11257151.

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Herrera CL, Wang Y, Udayakumar D, Xi Y, Do QN, Lewis MA, Owen DM, Fei B, Spong CY, Twickler DM, Madhuranthakam AJ. Longitudinal assessment of placental perfusion in normal and hypertensive pregnancies using pseudo-continuous arterial spin-labeled MRI: preliminary experience. Eur Radiol. 2023 Dec;33(12):9223-9232. doi: 10.1007/s00330-023-09945-x. Epub 2023 Jul 19. PubMed PMID: 37466705; PubMed Central PMCID: PMC10796849.

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Qi R, Nayar NU, Desai JP. Telerobotic Transcatheter Delivery System for Mitral Valve Implant. IEEE Robot Autom Lett. 2023 Jun;8(6):3629-3636. doi: 10.1109/LRA.2023.3265592. Epub 2023 Apr 7. PubMed PMID: 38152328; PubMed Central PMCID: PMC10751040.

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Tran MH, Fei B. Compact and ultracompact spectral imagers: technology and applications in biomedical imaging. J Biomed Opt. 2023 Apr;28(4):040901. doi: 10.1117/1.JBO.28.4.040901. Epub 2023 Apr 5. Review. PubMed PMID: 37035031; PubMed Central PMCID: PMC10075274.

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Yuan J, Hassan SS, Wu J, Koger CR, Packard RRS, Shi F, Fei B, Ding Y. Extended reality for biomedicine. Nat Rev Methods Primers. 2023;3. doi: 10.1038/s43586-023-00208-z. Epub 2023 Mar 2. PubMed PMID: 37051227; PubMed Central PMCID: PMC10088349.

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Pruitt K, Johnson B, Gahan J, Ma L, Fei B. A High-Speed Hyperspectral Laparoscopic Imaging System. Proc SPIE Int Soc Opt Eng. 2023 Feb;12466. doi: 10.1117/12.2653922. Epub 2023 Apr 3. PubMed PMID: 38524190; PubMed Central PMCID: PMC10961180.

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Huang J, Do QN, Shahed M, Xi Y, Lewis MA, Herrera CL, Owen D, Spong CY, Madhuranthakam AJ, Twickler DM, Fei B. Deep learning based automatic segmentation of the placenta and uterine cavity on prenatal MR images. Proc SPIE Int Soc Opt Eng. 2023 Feb;12465. doi: 10.1117/12.2653659. Epub 2023 Apr 7. PubMed PMID: 38486806; PubMed Central PMCID: PMC10937245.

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Pathour T, Chaudhary S, Sirsi SR, Fei B. Hemoglobin Microbubbles and the Prediction of Different Oxygen Levels Using RF Data and Deep Learning. Proc SPIE Int Soc Opt Eng. 2023 Feb;12470. doi: 10.1117/12.2655121. Epub 2023 Apr 10. PubMed PMID: 38495411; PubMed Central PMCID: PMC10942652.