Skip to main page content
Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
Onohara D, Corporan D, Hernandez-Merlo R, Guyton RA, Padala M. Mitral regurgitation worsens cardiac remodeling in ischemic cardiomyopathy in an experimental model. J Thorac Cardiovasc Surg. 2020 Sep;160(3):e107-e125. doi: 10.1016/j.jtcvs.2019.06.109. Epub 2019 Aug 25. PubMed PMID: 31562015; PubMed Central PMCID: PMC7039765.
Agra EJ, Suresh KS, He Q, Onohara D, Guyton RA, Padala M. Left Ventricular Thinning and Distension in Pig Hearts as a Reproducible Ex Vivo Model of Functional Mitral Regurgitation. ASAIO J. 2020 Sep/Oct;66(9):1016-1024. doi: 10.1097/MAT.0000000000001145. PubMed PMID: 32870609; PubMed Central PMCID: PMC7469430.
Hao D, Ding S, Qiu L, Lv Y, Fei B, Zhu Y, Qin B. Sequential vessel segmentation via deep channel attention network. Neural Netw. 2020 Aug;128:172-187. doi: 10.1016/j.neunet.2020.05.005. Epub 2020 May 13. PubMed PMID: 32447262.
Yogananda CGB, Shah BR, Yu FF, Pinho MC, Nalawade SS, Murugesan GK, Wagner BC, Mickey B, Patel TR, Fei B, Madhuranthakam AJ, Maldjian JA. A novel fully automated MRI-based deep-learning method for classification of 1p/19q co-deletion status in brain gliomas. Neurooncol Adv. 2020 Jan-Dec;2(1):vdaa066. doi: 10.1093/noajnl/vdaa066. eCollection 2020 Jan-Dec. PubMed PMID: 32705083; PubMed Central PMCID: PMC7367418.
Chen Z, Chen M, Yan X, Jia H, Fei B, Ha Y, Qing H, Yang H, Liu M, Wu R. Vacancy Occupation-Driven Polymorphic Transformation in Cobalt Ditelluride for Boosted Oxygen Evolution Reaction. ACS Nano. 2020 Jun 23;14(6):6968-6979. doi: 10.1021/acsnano.0c01456. Epub 2020 Jun 5. PubMed PMID: 32479055.
Kang J, Han K, Kim KS, Jang WS, Kim MJ, Yoo Y. 3D Microcalcification Detection Using a Color Doppler Twinkling Artifact with Optimized Transmit Conditions: Preliminary Results. Med Phys. 2020 Jun 20;. doi: 10.1002/mp.14342. [Epub ahead of print] PubMed PMID: 32563207; NIHMSID:NIHMS379337.
Tian Z, Li X, Zheng Y, Chen Z, Shi Z, Liu L, Fei B. Graph-convolutional-network-based interactive prostate segmentation in MR images. Med Phys. 2020 Jun 13;. doi: 10.1002/mp.14327. [Epub ahead of print] PubMed PMID: 32533855.
Ortega S, Halicek M, Fabelo H, Callico GM, Fei B. Hyperspectral and multispectral imaging in digital and computational pathology: a systematic review [Invited]. Biomed Opt Express. 2020 Jun 1;11(6):3195-3233. doi: 10.1364/BOE.386338. eCollection 2020 Jun 1. Review. PubMed PMID: 32637250; PubMed Central PMCID: PMC7315999.
Bangalore Yogananda CG, Shah BR, Vejdani-Jahromi M, Nalawade SS, Murugesan GK, Yu FF, Pinho MC, Wagner BC, Emblem KE, Bjørnerud A, Fei B, Madhuranthakam AJ, Maldjian JA. A Fully Automated Deep Learning Network for Brain Tumor Segmentation. Tomography. 2020 Jun;6(2):186-193. doi: 10.18383/j.tom.2019.00026. PubMed PMID: 32548295; PubMed Central PMCID: PMC7289260.
Corporan D, Kono T, Onohara D, Padala M. An Image Guided Transapical Mitral Valve Leaflet Puncture Model of Controlled Volume Overload from Mitral Regurgitation in the Rat. J Vis Exp. 2020 May 19;(159). doi: 10.3791/61029. PubMed PMID: 32510479; PubMed Central PMCID: PMC7291829.
Ma L, Liu X, Fei B. A multi-level similarity measure for the retrieval of the common CT imaging signs of lung diseases. Med Biol Eng Comput. 2020 May;58(5):1015-1029. doi: 10.1007/s11517-020-02146-4. Epub 2020 Mar 2. PubMed PMID: 32124223; PubMed Central PMCID: PMC7289080.
Ortega S, Halicek M, Fabelo H, Camacho R, Plaza ML, Godtliebsen F, M Callicó G, Fei B. Hyperspectral Imaging for the Detection of Glioblastoma Tumor Cells in H&E Slides Using Convolutional Neural Networks. Sensors (Basel). 2020 Mar 30;20(7). doi: 10.3390/s20071911. PubMed PMID: 32235483; PubMed Central PMCID: PMC7181269.
Dormer JD, Bhuiyan FI, Rahman N, Deaton N, Sheng J, Padala M, Desai JP, Fei B. Image Guided Mitral Valve Replacement: Registration of 3D Ultrasound and 2D X-ray Images. Proc SPIE Int Soc Opt Eng. 2020 Feb;11315. doi: 10.1117/12.2549407. Epub 2020 Mar 16. PubMed PMID: 32528217; PubMed Central PMCID: PMC7289184.
Huang J, Halicek M, Shahedi M, Fei B. Augmented reality visualization of hyperspectral imaging classifications for image-guided brain tumor phantom resection. Proc SPIE Int Soc Opt Eng. 2020 Feb;11315. doi: 10.1117/12.2549041. Epub 2020 Mar 16. PubMed PMID: 32606488; PubMed Central PMCID: PMC7325483.
Halicek M, Ortega S, Fabelo H, Lopez C, Lejaune M, Callico GM, Fei B. Conditional generative adversarial network for synthesizing hyperspectral images of breast cancer cells from digitized histology. Proc SPIE Int Soc Opt Eng. 2020 Feb;11320. doi: 10.1117/12.2549994. Epub 2020 Mar 16. PubMed PMID: 32528218; PubMed Central PMCID: PMC7289182.
Ortega S, Halicek M, Fabelo H, Guerra R, Lopez C, Lejaune M, Godtliebsen F, Callico GM, Fei B. Hyperspectral imaging and deep learning for the detection of breast cancer cells in digitized histological images. Proc SPIE Int Soc Opt Eng. 2020 Feb;11320. doi: 10.1117/12.2548609. Epub 2020 Mar 16. PubMed PMID: 32528219; PubMed Central PMCID: PMC7289185.
Bettati P, Chalian M, Huang J, Dormer JD, Shahedi M, Fei B. Augmented Reality-Assisted Biopsy of Soft Tissue Lesions. Proc SPIE Int Soc Opt Eng. 2020 Feb;11315. doi: 10.1117/12.2549381. Epub 2020 Mar 16. PubMed PMID: 32528216; PubMed Central PMCID: PMC7289183.
Mahajan A, Dormer J, Li Q, Chen D, Zhang Z, Fei B. Siamese neural networks for the classification of high-dimensional radiomic features. Proc SPIE Int Soc Opt Eng. 2020 Feb;11314. doi: 10.1117/12.2549389. Epub 2020 Mar 16. PubMed PMID: 32528215; PubMed Central PMCID: PMC7288755.
Mavuduru A, Halicek M, Shahedi M, Little JV, Chen AY, Myers LL, Fei B. Using a 22-Layer U-Net to Perform Segmentation of Squamous Cell Carcinoma on Digitized Head and Neck Histological Images. Proc SPIE Int Soc Opt Eng. 2020 Feb;11320. doi: 10.1117/12.2549061. Epub 2020 Mar 16. PubMed PMID: 32476709; PubMed Central PMCID: PMC7261613.
Ma L, Halicek M, Zhou X, Dormer J, Fei B. Hyperspectral Microscopic Imaging for Automatic Detection of Head and Neck Squamous Cell Carcinoma Using Histologic Image and Machine Learning. Proc SPIE Int Soc Opt Eng. 2020 Feb;11320. doi: 10.1117/12.2549369. Epub 2020 Mar 16. PubMed PMID: 32476708; PubMed Central PMCID: PMC7261606.
Vargas J, Le P, Shahedi M, Gahan J, Johnson B, Dormer JD, Shahub S, Pfefferle M, Judson BO, Alshara Y, Li Q, Fei B. A complex dual-modality kidney phantom for renal biopsy studies. Proc SPIE Int Soc Opt Eng. 2020 Feb;11319. doi: 10.1117/12.2549892. Epub 2020 Mar 16. PubMed PMID: 32476707; PubMed Central PMCID: PMC7261611.
Pfefferle M, Shahub S, Shahedi M, Gahan J, Johnson B, Le P, Vargas J, Judson BO, Alshara Y, Li Q, Fei B. Renal biopsy under augmented reality guidance. Proc SPIE Int Soc Opt Eng. 2020 Feb;11315. doi: 10.1117/12.2550593. Epub 2020 Mar 16. PubMed PMID: 32476704; PubMed Central PMCID: PMC7261605.
Shahedi M, Dormer JD, T T AD, Do QN, Xi Y, Lewis MA, Madhuranthakam AJ, Twickler DM, Fei B. Segmentation of uterus and placenta in MR images using a fully convolutional neural network. Proc SPIE Int Soc Opt Eng. 2020 Feb;11314. doi: 10.1117/12.2549873. Epub 2020 Mar 16. PubMed PMID: 32476702; PubMed Central PMCID: PMC7261604.
Shahedi M, Halicek M, Dormer JD, Fei B. Incorporating minimal user input into deep learning based image segmentation. Proc SPIE Int Soc Opt Eng. 2020 Feb;11313. doi: 10.1117/12.2549716. Epub 2020 Mar 10. PubMed PMID: 32476701; PubMed Central PMCID: PMC7261603.
Bangalore Yogananda CG, Shah BR, Vejdani-Jahromi M, Nalawade SS, Murugesan GK, Yu FF, Pinho MC, Wagner BC, Mickey B, Patel TR, Fei B, Madhuranthakam AJ, Maldjian JA. A novel fully automated MRI-based deep-learning method for classification of IDH mutation status in brain gliomas. Neuro Oncol. 2020 Mar 5;22(3):402-411. doi: 10.1093/neuonc/noz199. PubMed PMID: 31637430; PubMed Central PMCID: PMC7442388.
Halicek M, Dormer JD, Little JV, Chen AY, Fei B. Tumor detection of the thyroid and salivary glands using hyperspectral imaging and deep learning. Biomed Opt Express. 2020 Mar 1;11(3):1383-1400. doi: 10.1364/BOE.381257. eCollection 2020 Mar 1. PubMed PMID: 32206417; PubMed Central PMCID: PMC7075628.
Edwards K, Chhabra A, Dormer J, Jones P, Boutin RD, Lenchik L, Fei B. Abdominal muscle segmentation from CT using a convolutional neural network. Proc SPIE Int Soc Opt Eng. 2020 Feb;11317. doi: 10.1117/12.2549406. Epub 2020 Feb 28. PubMed PMID: 32577045; PubMed Central PMCID: PMC7309562.
Tran CT, Halicek M, Dormer JD, Tandon A, Hussain T, Fei B. Fully automated segmentation of the right ventricle in patients with repaired Tetralogy of Fallot using U-Net. Proc SPIE Int Soc Opt Eng. 2020 Feb;11317. doi: 10.1117/12.2549052. Epub 2020 Feb 28. PubMed PMID: 32476706; PubMed Central PMCID: PMC7261612.
Ma L, Halicek M, Fei B. In Vivo Cancer Detection in Animal Model Using Hyperspectral Image Classification with Wavelet Feature Extraction. Proc SPIE Int Soc Opt Eng. 2020 Feb;11317. doi: 10.1117/12.2549397. Epub 2020 Feb 28. PubMed PMID: 32476705; PubMed Central PMCID: PMC7261610.
Zhou X, Dormer J, Fei B. Development of a polarized hyperspectral microscope for cardiac fiber orientation imaging. Proc SPIE Int Soc Opt Eng. 2020 Feb;11215. doi: 10.1117/12.2549720. Epub 2020 Feb 25. PubMed PMID: 32528213; PubMed Central PMCID: PMC7288758.
Zhou X, Ma L, Halicek M, Dormer J, Fei B. Development of a new polarized hyperspectral imaging microscope. Proc SPIE Int Soc Opt Eng. 2020 Feb;11213. doi: 10.1117/12.2549676. Epub 2020 Feb 19. PubMed PMID: 32577044; PubMed Central PMCID: PMC7309561.
Nalawade S, Murugesan GK, Vejdani-Jahromi M, Fisicaro RA, Bangalore Yogananda CG, Wagner B, Mickey B, Maher E, Pinho MC, Fei B, Madhuranthakam AJ, Maldjian JA. Classification of brain tumor isocitrate dehydrogenase status using MRI and deep learning. J Med Imaging (Bellingham). 2019 Oct;6(4):046003. doi: 10.1117/1.JMI.6.4.046003. Epub 2019 Dec 10. PubMed PMID: 31824982; PubMed Central PMCID: PMC6903425.
Nappi F, Avtaar Singh SS, Padala M, Attias D, Nejjari M, Mihos CG, Benedetto U, Michler R. The Choice of Treatment in Ischemic Mitral Regurgitation With Reduced Left Ventricular Function. Ann Thorac Surg. 2019 Dec;108(6):1901-1912. doi: 10.1016/j.athoracsur.2019.06.039. Epub 2019 Aug 22. Review. PubMed PMID: 31445916; PubMed Central PMCID: PMC7424599.
Lu G, Wang D, Qin X, Muller S, Little JV, Wang X, Chen AY, Chen G, Fei B. Histopathology Feature Mining and Association with Hyperspectral Imaging for the Detection of Squamous Neoplasia. Sci Rep. 2019 Nov 28;9(1):17863. doi: 10.1038/s41598-019-54139-5. PubMed PMID: 31780698; PubMed Central PMCID: PMC6882850.
Ma L, Lu G, Wang D, Qin X, Chen ZG, Fei B. Adaptive deep learning for head and neck cancer detection using hyperspectral imaging. Vis Comput Ind Biomed Art. 2019;2(1):18. doi: 10.1186/s42492-019-0023-8. Epub 2019 Nov 21. PubMed PMID: 32190408; PubMed Central PMCID: PMC7055573.
Mei K, Hu B, Fei B, Qin B. Phase asymmetry ultrasound despeckling with fractional anisotropic diffusion and total variation. IEEE Trans Image Process. 2019 Nov 19;. doi: 10.1109/TIP.2019.2953361. [Epub ahead of print] PubMed PMID: 31751240; PubMed Central PMCID: PMC7370834.
Abiodun-Ojo OA, Akintayo AA, Akin-Akintayo OO, Tade FI, Nieh PT, Master VA, Alemozaffar M, Osunkoya AO, Goodman MM, Fei B, Schuster DM. 18F-Fluciclovine Parameters on Targeted Prostate Biopsy Associated with True Positivity in Recurrent Prostate Cancer. J Nucl Med. 2019 Nov;60(11):1531-1536. doi: 10.2967/jnumed.119.227033. Epub 2019 Apr 6. PubMed PMID: 30954940; PubMed Central PMCID: PMC6836857.
Halicek M, Shahedi M, Little JV, Chen AY, Myers LL, Sumer BD, Fei B. Head and Neck Cancer Detection in Digitized Whole-Slide Histology Using Convolutional Neural Networks. Sci Rep. 2019 Oct 1;9(1):14043. doi: 10.1038/s41598-019-50313-x. PubMed PMID: 31575946; PubMed Central PMCID: PMC6773771.
Halicek M, Dormer JD, Little JV, Chen AY, Myers L, Sumer BD, Fei B. Hyperspectral Imaging of Head and Neck Squamous Cell Carcinoma for Cancer Margin Detection in Surgical Specimens from 102 Patients Using Deep Learning. Cancers (Basel). 2019 Sep 14;11(9). doi: 10.3390/cancers11091367. PubMed PMID: 31540063; PubMed Central PMCID: PMC6769839.
Halicek M, Fabelo H, Ortega S, Little JV, Wang X, Chen AY, Callico GM, Myers L, Sumer BD, Fei B. Hyperspectral imaging for head and neck cancer detection: specular glare and variance of the tumor margin in surgical specimens. J Med Imaging (Bellingham). 2019 Jul;6(3):035004. doi: 10.1117/1.JMI.6.3.035004. Epub 2019 Sep 14. PubMed PMID: 31528662; PubMed Central PMCID: PMC6744927.
Fei B, Abiodun-Ojo OA, Akintayo AA, Akin-Akintayo O, Tade F, Nieh PT, Master VA, Alemozaffar M, Osunkoya AO, Goodman MM, Schuster DM. Feasibility and Initial Results: Fluciclovine Positron Emission Tomography/Ultrasound Fusion Targeted Biopsy of Recurrent Prostate Cancer. J Urol. 2019 Aug;202(2):413-421. doi: 10.1097/JU.0000000000000200. Epub 2019 Jul 8. PubMed PMID: 30817240; PubMed Central PMCID: PMC6800044.
Halicek M, Fabelo H, Ortega S, Callico GM, Fei B. In-Vivo and Ex-Vivo Tissue Analysis through Hyperspectral Imaging Techniques: Revealing the Invisible Features of Cancer. Cancers (Basel). 2019 May 30;11(6). doi: 10.3390/cancers11060756. Review. PubMed PMID: 31151223; PubMed Central PMCID: PMC6627361.
Shahedi M, Halicek M, Dormer JD, Schuster DM, Fei B. Deep learning-based three-dimensional segmentation of the prostate on computed tomography images. J Med Imaging (Bellingham). 2019 Apr;6(2):025003. doi: 10.1117/1.JMI.6.2.025003. Epub 2019 May 3. PubMed PMID: 31065570; PubMed Central PMCID: PMC6499404.
Halicek M, Shahedi M, Little JV, Chen AY, Myers LL, Sumer BD, Fei B. Detection of Squamous Cell Carcinoma in Digitized Histological Images from the Head and Neck Using Convolutional Neural Networks. Proc SPIE Int Soc Opt Eng. 2019 Feb;10956. doi: 10.1117/12.2512570. Epub 2019 Mar 18. PubMed PMID: 32476700; PubMed Central PMCID: PMC7261614.
Brown K, Dormer J, Fei B, Hoyt K. Deep 3D convolutional neural networks for fast super-resolution ultrasound imaging. Proc SPIE Int Soc Opt Eng. 2019 Feb;10955. doi: 10.1117/12.2511897. Epub 2019 Mar 15. PubMed PMID: 32476699; PubMed Central PMCID: PMC7261615.
Li Q, Dormer J, Daryani P, Chen D, Zhang Z, Fei B. Radiomics Analysis of MRI for Predicting Molecular Subtypes of Breast Cancer in Young Women. Proc SPIE Int Soc Opt Eng. 2019 Feb;10950. doi: 10.1117/12.2512056. Epub 2019 Mar 13. PubMed PMID: 32528211; PubMed Central PMCID: PMC7289058.
Fabelo H, Halicek M, Ortega S, Szolna A, Morera J, Sarmiento R, Callico GM, Fei B. Surgical Aid Visualization System for Glioblastoma Tumor Identification based on Deep Learning and In-Vivo Hyperspectral Images of Human Patients. Proc SPIE Int Soc Opt Eng. 2019 Feb;10951. doi: 10.1117/12.2512569. Epub 2019 Mar 8. PubMed PMID: 31447494; PubMed Central PMCID: PMC6708415.
Halicek M, Fabelo H, Ortega S, Little JV, Wang X, Chen AY, Callico GM, Myers LL, Sumer BD, Fei B. Cancer Detection Using Hyperspectral Imaging and Evaluation of the Superficial Tumor Margin Variance with Depth. Proc SPIE Int Soc Opt Eng. 2019 Feb;10951. doi: 10.1117/12.2512985. Epub 2019 Mar 8. PubMed PMID: 32489227; PubMed Central PMCID: PMC7265739.
Shahedi M, Halicek M, Li Q, Liu L, Zhang Z, Verma S, Schuster DM, Fei B. A semiautomatic approach for prostate segmentation in MR images using local texture classification and statistical shape modeling. Proc SPIE Int Soc Opt Eng. 2019 Feb;10951. doi: 10.1117/12.2512282. Epub 2019 Mar 8. PubMed PMID: 32528212; PubMed Central PMCID: PMC7289512.
Qin B, Jin M, Hao D, Lv Y, Liu Q, Zhu Y, Ding S, Zhao J, Fei B. Accurate vessel extraction via tensor completion of background layer in X-ray coronary angiograms. Pattern Recognit. 2019 Mar;87:38-54. doi: 10.1016/j.patcog.2018.09.015. Epub 2018 Oct 9. PubMed PMID: 31447490; PubMed Central PMCID: PMC6708416.
What would you like to do?