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Wheeler NJ, Heimark ZW, Airs PM, Mann A, Bartholomay LC, Zamanian M. Genetic and functional diversification of chemosensory pathway receptors in mosquito-borne filarial nematodes. PLoS Biol. 2020 Jun;18(6):e3000723. doi: 10.1371/journal.pbio.3000723. eCollection 2020 Jun. PubMed PMID: 32511224; PubMed Central PMCID: PMC7302863.
Maier T, Wheeler NJ, Namigai EKO, Tycko J, Grewelle RE, Woldeamanuel Y, Klohe K, Perez-Saez J, Sokolow SH, De Leo GA, Yoshino TP, Zamanian M, Reinhard-Rupp J. Gene drives for schistosomiasis transmission control. PLoS Negl Trop Dis. 2019 Dec;13(12):e0007833. doi: 10.1371/journal.pntd.0007833. eCollection 2019 Dec. Review. PubMed PMID: 31856157; PubMed Central PMCID: PMC6922350.
Comparative genomics of the major parasitic worms. Nat Genet. 2019 Jan;51(1):163-174. doi: 10.1038/s41588-018-0262-1. Epub 2018 Nov 5. PubMed PMID: 30397333; PubMed Central PMCID: PMC6349046.
Evans KS, Brady SC, Bloom JS, Tanny RE, Cook DE, Giuliani SE, Hippleheuser SW, Zamanian M, Andersen EC. Shared Genomic Regions Underlie Natural Variation in Diverse Toxin Responses. Genetics. 2018 Dec;210(4):1509-1525. doi: 10.1534/genetics.118.301311. Epub 2018 Oct 19. PubMed PMID: 30341085; PubMed Central PMCID: PMC6283156.
Wheeler NJ, Dinguirard N, Marquez J, Gonzalez A, Zamanian M, Yoshino TP, Castillo MG. Sequence and structural variation in the genome of the Biomphalaria glabrata embryonic (Bge) cell line. Parasit Vectors. 2018 Sep 4;11(1):496. doi: 10.1186/s13071-018-3059-2. PubMed PMID: 30180879; PubMed Central PMCID: PMC6122571.
Zamanighomi M, Zamanian M, Kimber M, Wang Z. Gene Regulatory Network Inference from Perturbed Time-Series Expression Data via Ordered Dynamical Expansion of Non-Steady State Actors. IEEE/ACM Trans Comput Biol Bioinform. 2018 Jul-Aug;15(4):1093-1106. doi: 10.1109/TCBB.2015.2509992. Epub 2015 Dec 17. PubMed PMID: 26701893.
Harischandra H, Yuan W, Loghry HJ, Zamanian M, Kimber MJ. Profiling extracellular vesicle release by the filarial nematode Brugia malayi reveals sex-specific differences in cargo and a sensitivity to ivermectin. PLoS Negl Trop Dis. 2018 Apr;12(4):e0006438. doi: 10.1371/journal.pntd.0006438. eCollection 2018 Apr. PubMed PMID: 29659599; PubMed Central PMCID: PMC5919703.
Zamanian M, Cook DE, Zdraljevic S, Brady SC, Lee D, Lee J, Andersen EC. Discovery of genomic intervals that underlie nematode responses to benzimidazoles. PLoS Negl Trop Dis. 2018 Mar;12(3):e0006368. doi: 10.1371/journal.pntd.0006368. eCollection 2018 Mar. PubMed PMID: 29601575; PubMed Central PMCID: PMC5895046.
Harischandra DS, Ghaisas S, Rokad D, Zamanian M, Jin H, Anantharam V, Kimber M, Kanthasamy A, Kanthasamy AG. Environmental neurotoxicant manganese regulates exosome-mediated extracellular miRNAs in cell culture model of Parkinson's disease: Relevance to α-synuclein misfolding in metal neurotoxicity. Neurotoxicology. 2018 Jan;64:267-277. doi: 10.1016/j.neuro.2017.04.007. Epub 2017 Apr 24. PubMed PMID: 28450057; PubMed Central PMCID: PMC5654692.
Lee D, Yang H, Kim J, Brady S, Zdraljevic S, Zamanian M, Kim H, Paik YK, Kruglyak L, Andersen EC, Lee J. The genetic basis of natural variation in a phoretic behavior. Nat Commun. 2017 Aug 17;8(1):273. doi: 10.1038/s41467-017-00386-x. PubMed PMID: 28819099; PubMed Central PMCID: PMC5561207.
Zamanian M, Andersen EC. Prospects and challenges of CRISPR/Cas genome editing for the study and control of neglected vector-borne nematode diseases. FEBS J. 2016 Sep;283(17):3204-21. doi: 10.1111/febs.13781. Epub 2016 Jul 11. Review. PubMed PMID: 27300487; PubMed Central PMCID: PMC5053252.
Zamanian M, Fraser LM, Agbedanu PN, Harischandra H, Moorhead AR, Day TA, Bartholomay LC, Kimber MJ. Release of Small RNA-containing Exosome-like Vesicles from the Human Filarial Parasite Brugia malayi. PLoS Negl Trop Dis. 2015;9(9):e0004069. doi: 10.1371/journal.pntd.0004069. eCollection 2015. PubMed PMID: 26401956; PubMed Central PMCID: PMC4581865.
Chan JD, Agbedanu PN, Grab T, Zamanian M, Dosa PI, Day TA, Marchant JS. Ergot Alkaloids (Re)generate New Leads as Antiparasitics. PLoS Negl Trop Dis. 2015;9(9):e0004063. doi: 10.1371/journal.pntd.0004063. eCollection 2015. PubMed PMID: 26367744; PubMed Central PMCID: PMC4569474.
Wheeler NJ, Agbedanu PN, Kimber MJ, Ribeiro P, Day TA, Zamanian M. Functional analysis of Girardia tigrina transcriptome seeds pipeline for anthelmintic target discovery. Parasit Vectors. 2015 Jan 20;8:34. doi: 10.1186/s13071-014-0622-3. PubMed PMID: 25600302; PubMed Central PMCID: PMC4304616.
McCoy CJ, Atkinson LE, Zamanian M, McVeigh P, Day TA, Kimber MJ, Marks NJ, Maule AG, Mousley A. New insights into the FLPergic complements of parasitic nematodes: Informing deorphanisation approaches. EuPA Open Proteom. 2014 Jun;3:262-272. doi: 10.1016/j.euprot.2014.04.002. eCollection 2014 Jun. PubMed PMID: 26366373; PubMed Central PMCID: PMC4405611.
Chan JD, Agbedanu PN, Zamanian M, Gruba SM, Haynes CL, Day TA, Marchant JS. 'Death and axes': unexpected Ca²⁺ entry phenologs predict new anti-schistosomal agents. PLoS Pathog. 2014 Feb;10(2):e1003942. doi: 10.1371/journal.ppat.1003942. eCollection 2014 Feb. PubMed PMID: 24586156; PubMed Central PMCID: PMC3930560.
Brewer MT, Agbedanu PN, Zamanian M, Day TA, Carlson SA. Evidence for a bacterial lipopolysaccharide-recognizing G-protein-coupled receptor in the bacterial engulfment by Entamoeba histolytica. Eukaryot Cell. 2013 Nov;12(11):1433-8. doi: 10.1128/EC.00150-13. Epub 2013 Aug 23. PubMed PMID: 23975887; PubMed Central PMCID: PMC3837928.
Tsai IJ, Zarowiecki M, Holroyd N, Garciarrubio A, Sánchez-Flores A, Brooks KL, Tracey A, Bobes RJ, Fragoso G, Sciutto E, Aslett M, Beasley H, Bennett HM, Cai X, Camicia F, Clark R, Cucher M, De Silva N, Day TA, Deplazes P, Estrada K, Fernández C, Holland PWH, Hou J, Hu S, Huckvale T, Hung SS, Kamenetzky L, Keane JA, Kiss F, Koziol U, Lambert O, Liu K, Luo X, Luo Y, Macchiaroli N, Nichol S, Paps J, Parkinson J, Pouchkina-Stantcheva N, Riddiford N, Rosenzvit M, Salinas G, Wasmuth JD, Zamanian M, Zheng Y, Cai J, Soberón X, Olson PD, Laclette JP, Brehm K, Berriman M. The genomes of four tapeworm species reveal adaptations to parasitism. Nature. 2013 Apr 4;496(7443):57-63. doi: 10.1038/nature12031. Epub 2013 Mar 13. PubMed PMID: 23485966; PubMed Central PMCID: PMC3964345.
Atkinson LE, Stevenson M, McCoy CJ, Marks NJ, Fleming C, Zamanian M, Day TA, Kimber MJ, Maule AG, Mousley A. flp-32 Ligand/receptor silencing phenocopy faster plant pathogenic nematodes. PLoS Pathog. 2013 Feb;9(2):e1003169. doi: 10.1371/journal.ppat.1003169. Epub 2013 Feb 28. PubMed PMID: 23468621; PubMed Central PMCID: PMC3585147.
Zamanian M, Agbedanu PN, Wheeler NJ, McVeigh P, Kimber MJ, Day TA. Novel RNAi-mediated approach to G protein-coupled receptor deorphanization: proof of principle and characterization of a planarian 5-HT receptor. PLoS One. 2012;7(7):e40787. doi: 10.1371/journal.pone.0040787. Epub 2012 Jul 18. PubMed PMID: 22815820; PubMed Central PMCID: PMC3399857.
Zamanian M, Kimber MJ, McVeigh P, Carlson SA, Maule AG, Day TA. The repertoire of G protein-coupled receptors in the human parasite Schistosoma mansoni and the model organism Schmidtea mediterranea. BMC Genomics. 2011 Dec 6;12:596. doi: 10.1186/1471-2164-12-596. PubMed PMID: 22145649; PubMed Central PMCID: PMC3261222.
McVeigh P, Mair GR, Novozhilova E, Day A, Zamanian M, Marks NJ, Kimber MJ, Day TA, Maule AG. Schistosome I/Lamides--a new family of bioactive helminth neuropeptides. Int J Parasitol. 2011 Jul;41(8):905-13. doi: 10.1016/j.ijpara.2011.03.010. Epub 2011 Apr 21. PubMed PMID: 21554884; PubMed Central PMCID: PMC3118037.
Novozhilova E, Kimber MJ, Qian H, McVeigh P, Robertson AP, Zamanian M, Maule AG, Day TA. FMRFamide-like peptides (FLPs) enhance voltage-gated calcium currents to elicit muscle contraction in the human parasite Schistosoma mansoni. PLoS Negl Trop Dis. 2010 Aug 10;4(8):e790. doi: 10.1371/journal.pntd.0000790. PubMed PMID: 20706630; PubMed Central PMCID: PMC2919380.
Kimber MJ, Sayegh L, El-Shehabi F, Song C, Zamanian M, Woods DJ, Day TA, Ribeiro P. Identification of an Ascaris G protein-coupled acetylcholine receptor with atypical muscarinic pharmacology. Int J Parasitol. 2009 Sep;39(11):1215-22. doi: 10.1016/j.ijpara.2009.03.001. Epub 2009 Mar 25. PubMed PMID: 19327362; PubMed Central PMCID: PMC2713365.
McVeigh P, Mair GR, Atkinson L, Ladurner P, Zamanian M, Novozhilova E, Marks NJ, Day TA, Maule AG. Discovery of multiple neuropeptide families in the phylum Platyhelminthes. Int J Parasitol. 2009 Sep;39(11):1243-52. doi: 10.1016/j.ijpara.2009.03.005. Epub 2009 Apr 8. PubMed PMID: 19361512; PubMed Central PMCID: PMC2749192.
Berriman M, Haas BJ, LoVerde PT, Wilson RA, Dillon GP, Cerqueira GC, Mashiyama ST, Al-Lazikani B, Andrade LF, Ashton PD, Aslett MA, Bartholomeu DC, Blandin G, Caffrey CR, Coghlan A, Coulson R, Day TA, Delcher A, DeMarco R, Djikeng A, Eyre T, Gamble JA, Ghedin E, Gu Y, Hertz-Fowler C, Hirai H, Hirai Y, Houston R, Ivens A, Johnston DA, Lacerda D, Macedo CD, McVeigh P, Ning Z, Oliveira G, Overington JP, Parkhill J, Pertea M, Pierce RJ, Protasio AV, Quail MA, Rajandream MA, Rogers J, Sajid M, Salzberg SL, Stanke M, Tivey AR, White O, Williams DL, Wortman J, Wu W, Zamanian M, Zerlotini A, Fraser-Liggett CM, Barrell BG, El-Sayed NM. The genome of the blood fluke Schistosoma mansoni. Nature. 2009 Jul 16;460(7253):352-8. doi: 10.1038/nature08160. PubMed PMID: 19606141; PubMed Central PMCID: PMC2756445.
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