Skip to main page content
Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
Deng W, Zhu X, Skogerbø G, Zhao Y, Fu Z, Wang Y, He H, Cai L, Sun H, Liu C, Li B, Bai B, Wang J, Jia D, Sun S, He H, Cui Y, Wang Y, Bu D, Chen R. Organization of the Caenorhabditis elegans small non-coding transcriptome: genomic features, biogenesis, and expression. Genome Res. 2006 Jan;16(1):20-9. doi: 10.1101/gr.4139206. Epub 2005 Dec 12. PubMed PMID: 16344563; PubMed Central PMCID: PMC1356125.
Bao L, Zhou M, Cui Y. nsSNPAnalyzer: identifying disease-associated nonsynonymous single nucleotide polymorphisms. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W480-2. doi: 10.1093/nar/gki372. PubMed PMID: 15980516; PubMed Central PMCID: PMC1160133.
Bao L, Cui Y. Prediction of the phenotypic effects of non-synonymous single nucleotide polymorphisms using structural and evolutionary information. Bioinformatics. 2005 May 15;21(10):2185-90. doi: 10.1093/bioinformatics/bti365. Epub 2005 Mar 3. PubMed PMID: 15746281.
Li H, Lu L, Manly KF, Chesler EJ, Bao L, Wang J, Zhou M, Williams RW, Cui Y. Inferring gene transcriptional modulatory relations: a genetical genomics approach. Hum Mol Genet. 2005 May 1;14(9):1119-25. doi: 10.1093/hmg/ddi124. Epub 2005 Mar 16. PubMed PMID: 15772094.
Cui Y, Zhou M, Wong WH. Integrated analysis of microarray data and gene function information. OMICS. 2004 Summer;8(2):106-17. doi: 10.1089/1536231041388320. PubMed PMID: 15268770.
Zhou M, Cui Y. GeneInfoViz: constructing and visualizing gene relation networks. In Silico Biol. 2004;4(3):323-33. PubMed PMID: 15724283.
Qi Z, Cui Y, Fang W, Ling L, Chen R. Autosomal similarity revealed by eukaryotic genomic comparison. J Biol Phys. 2004 Jan;30(4):305-12. doi: 10.1007/s10867-004-0996-0. PubMed PMID: 23345874; PubMed Central PMCID: PMC3456315.
Ling L, Wang J, Cui Y, Li W, Chen R. Proteome-wide analysis of protein function composition reveals the clustering and phylogenetic properties of organisms. Mol Phylogenet Evol. 2002 Oct;25(1):101-11. doi: 10.1016/s1055-7903(02)00354-8. PubMed PMID: 12383754.
Cui Y, Wong WH, Bornberg-Bauer E, Chan HS. Recombinatoric exploration of novel folded structures: a heteropolymer-based model of protein evolutionary landscapes. Proc Natl Acad Sci U S A. 2002 Jan 22;99(2):809-14. doi: 10.1073/pnas.022240299. PubMed PMID: 11805332; PubMed Central PMCID: PMC117387.
Cui Y, Wong WH. Multiple-sequence information provides protection against mis-specified potential energy functions in the lattice model of proteins. Phys Rev Lett. 2000 Dec 11;85(24):5242-5. doi: 10.1103/PhysRevLett.85.5242. PubMed PMID: 11102231.
Cui Y, Chen RS, Wong WH. The coevolution of cell senescence and diploid sexual reproduction in unicellular organisms. Proc Natl Acad Sci U S A. 2000 Mar 28;97(7):3330-5. doi: 10.1073/pnas.97.7.3330. PubMed PMID: 10737794; PubMed Central PMCID: PMC16239.
Sun ZR, Cui Y, Ling LJ, Guo Q, Chen RS. Molecular dynamics simulation of protein folding with supersecondary structure constraints. J Protein Chem. 1998 Nov;17(8):765-9. doi: 10.1023/a:1020722117182. PubMed PMID: 9988523.
Cui Y, Chen RS, Wong WH. Protein folding simulation with genetic algorithm and supersecondary structure constraints. Proteins. 1998 May 15;31(3):247-57. PubMed PMID: 9593196.
Cui Y, Chen RS, Wong WH. Molecular dynamic simulation of chaperonin-mediated protein folding. J Protein Chem. 1998 May;17(4):377-80. doi: 10.1023/a:1022511417343. PubMed PMID: 9619590.
Wong WH, Cui Y, Chen RS. Torsional relaxation for biopolymers. J Comput Biol. 1998 Winter;5(4):655-65. doi: 10.1089/cmb.1998.5.655. PubMed PMID: 10072082.
What would you like to do?