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Moussa. Visualizing Human Brain Connectome in Virtual Reality. IEEE International Symposium on Biomedical Imaging; 2018; c.
Moussa. Visualizing Human Brain Connectome in Virtual Reality. IEEE International Symposium on Biomedical Imaging; 2018; c.
A Tensor Statistical Model for Quantifying Dynamic Functional Connectivity. IPMI.
Huang. A High Throughput Multi-Atlas Patch Based Segmentation Software. IEEE International Symposium on Biomedical Imaging; 2018; c.
Kaufer. Neuropsychiatric Profiles of Frontotemporal Degeneration Subtypes from the Neuroimaging in Frontotemporal Dementia (NIFD) Cohort. 11th International Conference on Frontotemporal Dementias; 2018; c.
SAU-Net: A Universal Deep Network for Cell Counting. ACM-BCB ... ... : the ... ACM Conference on Bioinformatics, Computational Biology and Biomedicine. ACM Conference on Bioinformatics, Computational Biology and Biomedicine. NIHMSID: NIHMS1559782.
Cross Modality Microscopy Segmentation via Adversarial Adaptation. IWBBIO: International Work-Conference on Bioinformatics and Biomedical Engineering. NIHMSID: NIHMS1559790.
Wu G, Qi F, Shen D. Learning best features for deformable registration of MR brains. Med Image Comput Comput Assist Interv. 2005;8(Pt 2):179-87. doi: 10.1007/11566489_23. PubMed PMID: 16685958.
Wu G, Qi F, Shen D. Learning best features and deformation statistics for hierarchical registration of MR brain images. Inf Process Med Imaging. 2007;20:160-71. doi: 10.1007/978-3-540-73273-0_14. PubMed PMID: 17633697.
Yap PT, Wu G, Zhu H, Lin W, Shen D. Fast tensor image morphing for elastic registration. Med Image Comput Comput Assist Interv. 2009;12(Pt 1):721-9. doi: 10.1007/978-3-642-04268-3_89. PubMed PMID: 20426052; PubMed Central PMCID: PMC2832198.
Wang Q, Yap PT, Wu G, Shen D. Attribute vector guided groupwise registration. Med Image Comput Comput Assist Interv. 2009;12(Pt 1):656-63. doi: 10.1007/978-3-642-04268-3_81. PubMed PMID: 20426044.
Tang S, Fan Y, Wu G, Kim M, Shen D. RABBIT: rapid alignment of brains by building intermediate templates. Neuroimage. 2009 Oct 1;47(4):1277-87. doi: 10.1016/j.neuroimage.2009.02.043. Epub 2009 Mar 10. PubMed PMID: 19285145; PubMed Central PMCID: PMC5002990.
Wu G, Wang Q, Jia H, Shen D. Groupwise registration by hierarchical anatomical correspondence detection. Med Image Comput Comput Assist Interv. 2010;13(Pt 2):684-91. doi: 10.1007/978-3-642-15745-5_84. PubMed PMID: 20879375; PubMed Central PMCID: PMC3018804.
Kim M, Wu G, Yap PT, Shen D. A generalized learning based framework for fast brain image registration. Med Image Comput Comput Assist Interv. 2010;13(Pt 2):306-14. doi: 10.1007/978-3-642-15745-5_38. PubMed PMID: 20879329; PubMed Central PMCID: PMC3021962.
Wu G, Wang Q, Jia H, Shen D. Registration of longitudinal image sequences with implicit template and spatial-temporal heuristics. Med Image Comput Comput Assist Interv. 2010;13(Pt 2):618-25. doi: 10.1007/978-3-642-15745-5_76. PubMed PMID: 20879367; PubMed Central PMCID: PMC3021473.
Wu G, Jia H, Wang Q, Shen D. Groupwise registration with sharp mean. Med Image Comput Comput Assist Interv. 2010;13(Pt 2):570-7. doi: 10.1007/978-3-642-15745-5_70. PubMed PMID: 20879361; PubMed Central PMCID: PMC3018690.
Wu G, Yap PT, Kim M, Shen D. TPS-HAMMER: improving HAMMER registration algorithm by soft correspondence matching and thin-plate splines based deformation interpolation. Neuroimage. 2010 Feb 1;49(3):2225-33. doi: 10.1016/j.neuroimage.2009.10.065. Epub 2009 Oct 28. PubMed PMID: 19878724; PubMed Central PMCID: PMC2818392.
Wu G, Yap PT, Wang Q, Shen D. GROUPWISE REGISTRATION FROM EXEMPLAR TO GROUP MEAN: EXTENDING HAMMER TO GROUPWISE REGISTRATION. Proc IEEE Int Symp Biomed Imaging. 2010 Apr 17;2010(14-17 April 2010):396-399. doi: 10.1109/ISBI.2010.5490327. PubMed PMID: 21278924; PubMed Central PMCID: PMC3030247.
Yap PT, Wu G, Zhu H, Lin W, Shen D. F-TIMER: fast tensor image morphing for elastic registration. IEEE Trans Med Imaging. 2010 May;29(5):1192-203. doi: 10.1109/TMI.2010.2043680. Epub 2010 Mar 18. PubMed PMID: 20304728.
Wang Q, Wu G, Yap PT, Shen D. Attribute vector guided groupwise registration. Neuroimage. 2010 May 1;50(4):1485-96. doi: 10.1016/j.neuroimage.2010.01.040. Epub 2010 Jan 22. PubMed PMID: 20097291; PubMed Central PMCID: PMC2839051.
Jia H, Wu G, Wang Q, Shen D. ABSORB: Atlas Building by Self-organized Registration and Bundling. Neuroimage. 2010 Jul 1;51(3):1057-70. doi: 10.1016/j.neuroimage.2010.03.010. Epub 2010 Mar 10. PubMed PMID: 20226255; PubMed Central PMCID: PMC2862873.
Wang Q, Chen L, Yap PT, Wu G, Shen D. Groupwise registration based on hierarchical image clustering and atlas synthesis. Hum Brain Mapp. 2010 Aug;31(8):1128-40. doi: 10.1002/hbm.20923. PubMed PMID: 20063349; PubMed Central PMCID: PMC2910120.
Zhang D, Wu G, Jia H, Shen D. Confidence-guided sequential label fusion for multi-atlas based segmentation. Med Image Comput Comput Assist Interv. 2011;14(Pt 3):643-50. doi: 10.1007/978-3-642-23626-6_79. PubMed PMID: 22003754.
Wang Q, Yap PT, Wu G, Shen D. Diffusion tensor image registration with combined tract and tensor features. Med Image Comput Comput Assist Interv. 2011;14(Pt 2):200-8. doi: 10.1007/978-3-642-23629-7_25. PubMed PMID: 21995030.
Wang Q, Yap PT, Wu G, Shen D. Fiber modeling and clustering based on neuroanatomical features. Med Image Comput Comput Assist Interv. 2011;14(Pt 2):17-24. doi: 10.1007/978-3-642-23629-7_3. PubMed PMID: 21995008.
Wu G, Wang Q, Lian J, Shen D. Estimating the 4D respiratory lung motion by spatiotemporal registration and building super-resolution image. Med Image Comput Comput Assist Interv. 2011;14(Pt 1):532-9. doi: 10.1007/978-3-642-23623-5_67. PubMed PMID: 22003659; PubMed Central PMCID: PMC3197728.
Liao S, Jia H, Wu G, Shen D. A novel longitudinal atlas construction framework by groupwise registration of subject image sequences. Inf Process Med Imaging. 2011;22:283-95. doi: 10.1007/978-3-642-22092-0_24. PubMed PMID: 21761664; PubMed Central PMCID: PMC3143718.
Wu G, Wang Q, Lian J, Shen D. Reconstruction of 4D-CT from a single free-breathing 3D-CT by spatial-temporal image registration. Inf Process Med Imaging. 2011;22:686-98. doi: 10.1007/978-3-642-22092-0_56. PubMed PMID: 21761696; PubMed Central PMCID: PMC3141594.
Jia H, Yap PT, Wu G, Wang Q, Shen D. Intermediate templates guided groupwise registration of diffusion tensor images. Neuroimage. 2011 Jan 15;54(2):928-39. doi: 10.1016/j.neuroimage.2010.09.019. Epub 2010 Sep 17. PubMed PMID: 20851197; PubMed Central PMCID: PMC2997149.
Shi F, Yap PT, Wu G, Jia H, Gilmore JH, Lin W, Shen D. Infant brain atlases from neonates to 1- and 2-year-olds. PLoS One. 2011 Apr 14;6(4):e18746. doi: 10.1371/journal.pone.0018746. PubMed PMID: 21533194; PubMed Central PMCID: PMC3077403.
Wu G, Jia H, Wang Q, Shen D. SharpMean: groupwise registration guided by sharp mean image and tree-based registration. Neuroimage. 2011 Jun 15;56(4):1968-81. doi: 10.1016/j.neuroimage.2011.03.050. Epub 2011 Apr 2. PubMed PMID: 21440646; PubMed Central PMCID: PMC3105200.
Kim M, Wu G, Shen D. GROUPWISE REGISTRATION OF BREAST DCE-MR IMAGES FOR ACCURATE TUMOR MEASUREMENT. Proc IEEE Int Symp Biomed Imaging. 2011 Dec 31;2011:598-601. doi: 10.1109/ISBI.2011.5872478. PubMed PMID: 24443669; PubMed Central PMCID: PMC3892905.
Shi F, Wang L, Wu G, Zhang Y, Liu M, Gilmore JH, Lin W, Shen D. Atlas construction via dictionary learning and group sparsity. Med Image Comput Comput Assist Interv. 2012;15(Pt 1):247-55. doi: 10.1007/978-3-642-33415-3_31. PubMed PMID: 23285558.
Zhang Y, Wu G, Yap PT, Feng Q, Lian J, Chen W, Shen D. Non-local means resolution enhancement of lung 4D-CT data. Med Image Comput Comput Assist Interv. 2012;15(Pt 1):214-22. doi: 10.1007/978-3-642-33415-3_27. PubMed PMID: 23285554.
Wu G, Kim M, Wang Q, Shen D. Hierarchical attribute-guided symmetric diffeomorphic registration for MR brain images. Med Image Comput Comput Assist Interv. 2012;15(Pt 2):90-7. doi: 10.1007/978-3-642-33418-4_12. PubMed PMID: 23286036; PubMed Central PMCID: PMC3771101.
Kim M, Wu G, Shen D. Hierarchical alignment of breast DCE-MR images by groupwise registration and robust feature matching. Med Phys. 2012 Jan;39(1):353-66. doi: 10.1118/1.3665705. PubMed PMID: 22225305; PubMed Central PMCID: PMC3259615.
Wu G, Wang Q, Shen D. Registration of longitudinal brain image sequences with implicit template and spatial-temporal heuristics. Neuroimage. 2012 Jan 2;59(1):404-21. doi: 10.1016/j.neuroimage.2011.07.026. Epub 2011 Jul 23. PubMed PMID: 21820065; PubMed Central PMCID: PMC3195864.
Liao S, Jia H, Wu G, Shen D. A novel framework for longitudinal atlas construction with groupwise registration of subject image sequences. Neuroimage. 2012 Jan 16;59(2):1275-89. doi: 10.1016/j.neuroimage.2011.07.095. Epub 2011 Aug 22. PubMed PMID: 21884801; PubMed Central PMCID: PMC3230771.
Li Y, Wang Y, Wu G, Shi F, Zhou L, Lin W, Shen D. Discriminant analysis of longitudinal cortical thickness changes in Alzheimer's disease using dynamic and network features. Neurobiol Aging. 2012 Feb;33(2):427.e15-30. doi: 10.1016/j.neurobiolaging.2010.11.008. Epub 2011 Jan 26. PubMed PMID: 21272960; PubMed Central PMCID: PMC3086988.
Wu G, Wang Q, Jia H, Shen D. Feature-based groupwise registration by hierarchical anatomical correspondence detection. Hum Brain Mapp. 2012 Feb;33(2):253-71. doi: 10.1002/hbm.21209. Epub 2011 Mar 9. PubMed PMID: 21391266.
Li G, Nie J, Wu G, Wang Y, Shen D. Consistent reconstruction of cortical surfaces from longitudinal brain MR images. Neuroimage. 2012 Feb 15;59(4):3805-20. doi: 10.1016/j.neuroimage.2011.11.012. Epub 2011 Nov 15. PubMed PMID: 22119005; PubMed Central PMCID: PMC3288171.
Jia H, Wu G, Wang Q, Wang Y, Kim M, Shen D. Directed graph based image registration. Comput Med Imaging Graph. 2012 Mar;36(2):139-51. doi: 10.1016/j.compmedimag.2011.09.001. Epub 2011 Oct 19. PubMed PMID: 22014476; PubMed Central PMCID: PMC3272327.
Kim M, Wu G, Yap PT, Shen D. A general fast registration framework by learning deformation-appearance correlation. IEEE Trans Image Process. 2012 Apr;21(4):1823-33. doi: 10.1109/TIP.2011.2170698. Epub 2011 Oct 6. PubMed PMID: 21984505; PubMed Central PMCID: PMC3355525.
Liao S, Wu G, Shen D. A statistical framework for inter-group image registration. Neuroinformatics. 2012 Oct;10(4):367-78. doi: 10.1007/s12021-012-9156-z. PubMed PMID: 22878830.
Zhang Y, Wu G, Yap PT, Feng Q, Lian J, Chen W, Shen D. Hierarchical patch-based sparse representation--a new approach for resolution enhancement of 4D-CT lung data. IEEE Trans Med Imaging. 2012 Nov;31(11):1993-2005. doi: 10.1109/TMI.2012.2202245. Epub 2012 Jun 6. PubMed PMID: 22692897.
Wu G, Lian J, Shen D. Improving image-guided radiation therapy of lung cancer by reconstructing 4D-CT from a single free-breathing 3D-CT on the treatment day. Med Phys. 2012 Dec;39(12):7694-709. doi: 10.1118/1.4768226. PubMed PMID: 23231317; PubMed Central PMCID: PMC3528792.
Wu G, Wang Q, Liao S, Zhang D, Nie F, Shen D. Minimizing joint risk of mislabeling for iterative Patch-based label fusion. Med Image Comput Comput Assist Interv. 2013;16(Pt 3):551-8. doi: 10.1007/978-3-642-40760-4_69. PubMed PMID: 24505805; PubMed Central PMCID: PMC4109064.
Wu G, Kim M, Wang Q, Gao Y, Liao S, Shen D. Unsupervised deep feature learning for deformable registration of MR brain images. Med Image Comput Comput Assist Interv. 2013;16(Pt 2):649-56. doi: 10.1007/978-3-642-40763-5_80. PubMed PMID: 24579196; PubMed Central PMCID: PMC4073478.
Wang Q, Kim M, Wu G, Shen D. Joint learning of appearance and transformation for predicting brain MR image registration. Inf Process Med Imaging. 2013;23:499-510. doi: 10.1007/978-3-642-38868-2_42. PubMed PMID: 24683994; PubMed Central PMCID: PMC4000556.
Bhavsar A, Wu G, Shen D. Harnessing group-sparsity regularization for resolution enhancement of lung 4D-CT. Med Image Comput Comput Assist Interv. 2013;16(Pt 3):139-46. doi: 10.1007/978-3-642-40760-4_18. PubMed PMID: 24505754; PubMed Central PMCID: PMC4206263.
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