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James Davis's Bibliography

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Nielson JA, Jezewski AJ, Wellington M, Davis JM. Survival in macrophages induces enhanced virulence in Cryptococcus. mSphere. 2024 Jan 30;9(1):e0050423. doi: 10.1128/msphere.00504-23. Epub 2023 Dec 11. PubMed PMID: 38073033; PubMed Central PMCID: PMC10826345.

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Nielson JA, Davis JM. Roles for Microglia in Cryptococcal Brain Dissemination in the Zebrafish Larva. Microbiol Spectr. 2023 Jan 31;11(2):e0431522. doi: 10.1128/spectrum.04315-22. [Epub ahead of print] PubMed PMID: 36719205; PubMed Central PMCID: PMC10100726.

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Ristow LC, Davis JM. The granuloma in cryptococcal disease. PLoS Pathog. 2021 Mar;17(3):e1009342. doi: 10.1371/journal.ppat.1009342. eCollection 2021 Mar. Review. PubMed PMID: 33735307; PubMed Central PMCID: PMC7971563.

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Rosowski EE, Knox BP, Archambault LS, Huttenlocher A, Keller NP, Wheeler RT, Davis JM. The Zebrafish as a Model Host for Invasive Fungal Infections. J Fungi (Basel). 2018 Dec 13;4(4). doi: 10.3390/jof4040136. Review. PubMed PMID: 30551557; PubMed Central PMCID: PMC6308935.

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Nguyen JC, Rebsamen SL, Tuite MJ, Davis JM, Rosas HG. Imaging of Kingella kingae musculoskeletal infections in children: a series of 5 cases. Emerg Radiol. 2018 Dec;25(6):615-620. doi: 10.1007/s10140-018-1617-8. Epub 2018 Jun 16. PubMed PMID: 29909593.

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Johnson CJ, Davis JM, Huttenlocher A, Kernien JF, Nett JE. Emerging Fungal Pathogen Candida auris Evades Neutrophil Attack. mBio. 2018 Aug 21;9(4). doi: 10.1128/mBio.01403-18. PubMed PMID: 30131360; PubMed Central PMCID: PMC6106086.

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Misch EA, Saddler C, Davis JM. Skin and Soft Tissue Infections Due to Nontuberculous Mycobacteria. Curr Infect Dis Rep. 2018 Mar 19;20(4):6. doi: 10.1007/s11908-018-0611-3. Review. PubMed PMID: 29556857.

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Davis JM, Huang M, Botts MR, Hull CM, Huttenlocher A. A Zebrafish Model of Cryptococcal Infection Reveals Roles for Macrophages, Endothelial Cells, and Neutrophils in the Establishment and Control of Sustained Fungemia. Infect Immun. 2016 Oct;84(10):3047-62. doi: 10.1128/IAI.00506-16. Print 2016 Oct. PubMed PMID: 27481252; PubMed Central PMCID: PMC5038067.

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Takaki K, Davis JM, Winglee K, Ramakrishnan L. Evaluation of the pathogenesis and treatment of Mycobacterium marinum infection in zebrafish. Nat Protoc. 2013 Jun;8(6):1114-24. doi: 10.1038/nprot.2013.068. Epub 2013 May 16. PubMed PMID: 23680983; PubMed Central PMCID: PMC3919459.

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Yang CT, Cambier CJ, Davis JM, Hall CJ, Crosier PS, Ramakrishnan L. Neutrophils exert protection in the early tuberculous granuloma by oxidative killing of mycobacteria phagocytosed from infected macrophages. Cell Host Microbe. 2012 Sep 13;12(3):301-12. doi: 10.1016/j.chom.2012.07.009. PubMed PMID: 22980327; PubMed Central PMCID: PMC3638950.

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Volkman HE, Pozos TC, Zheng J, Davis JM, Rawls JF, Ramakrishnan L. Tuberculous granuloma induction via interaction of a bacterial secreted protein with host epithelium. Science. 2010 Jan 22;327(5964):466-9. doi: 10.1126/science.1179663. Epub 2009 Dec 10. PubMed PMID: 20007864; PubMed Central PMCID: PMC3125975.

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Davis JM, Haake DA, Ramakrishnan L. Leptospira interrogans stably infects zebrafish embryos, altering phagocyte behavior and homing to specific tissues. PLoS Negl Trop Dis. 2009 Jun 23;3(6):e463. doi: 10.1371/journal.pntd.0000463. PubMed PMID: 19547748; PubMed Central PMCID: PMC2693671.

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Brannon MK, Davis JM, Mathias JR, Hall CJ, Emerson JC, Crosier PS, Huttenlocher A, Ramakrishnan L, Moskowitz SM. Pseudomonas aeruginosa Type III secretion system interacts with phagocytes to modulate systemic infection of zebrafish embryos. Cell Microbiol. 2009 May;11(5):755-68. doi: 10.1111/j.1462-5822.2009.01288.x. Epub 2009 Jan 15. PubMed PMID: 19207728; PubMed Central PMCID: PMC2933946.

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Davis JM, Ramakrishnan L. The role of the granuloma in expansion and dissemination of early tuberculous infection. Cell. 2009 Jan 9;136(1):37-49. doi: 10.1016/j.cell.2008.11.014. PubMed PMID: 19135887; PubMed Central PMCID: PMC3134310.

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Davis JM, Ramakrishnan L. Phagocyte-Pathogen Intercations. In: Russell DG, Gordon S, editors. The Zebrafish as a Model of Host-Pathogen Interactions Washington, D.C.: ASM Press; 2009. Chapter 34; p.523-536. 569p.

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Davis JM, Ramakrishnan L. "The very pulse of the machine": the tuberculous granuloma in motion. Immunity. 2008 Feb;28(2):146-8. doi: 10.1016/j.immuni.2008.01.002. PubMed PMID: 18275827.

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Clay H, Davis JM, Beery D, Huttenlocher A, Lyons SE, Ramakrishnan L. Dichotomous role of the macrophage in early Mycobacterium marinum infection of the zebrafish. Cell Host Microbe. 2007 Jul 12;2(1):29-39. doi: 10.1016/j.chom.2007.06.004. PubMed PMID: 18005715; PubMed Central PMCID: PMC3115716.

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Cosma CL, Swaim LE, Volkman H, Ramakrishnan L, Davis JM. Zebrafish and frog models of Mycobacterium marinum infection. Curr Protoc Microbiol. 2006 Dec;Chapter 10:Unit 10B.2. doi: 10.1002/0471729256.mc10b02s3. PubMed PMID: 18770575.

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Davis JM, Clay H, Lewis JL, Ghori N, Herbomel P, Ramakrishnan L. Real-time visualization of mycobacterium-macrophage interactions leading to initiation of granuloma formation in zebrafish embryos. Immunity. 2002 Dec;17(6):693-702. doi: 10.1016/s1074-7613(02)00475-2. PubMed PMID: 12479816.

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Takada N, York J, Davis JM, Schumpert B, Yasuo H, Satoh N, Swalla BJ. Brachyury expression in tailless Molgulid ascidian embryos. Evol Dev. 2002 May-Jun;4(3):205-11. doi: 10.1046/j.1525-142x.2002.02004.x. PubMed PMID: 12054293.

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Roles for Microglia in Cryptococcal Brain Dissemination in the Zebrafish Larva. Microbiology spectrum. . NIHMSID: NIHMS1871089.

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