My Bibliography

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Barbier M, Oliver A, Rao J, Hanna SL, Goldberg JB, Albertí S. Novel phosphorylcholine-containing protein of Pseudomonas aeruginosa chronic infection isolates interacts with airway epithelial cells. J Infect Dis. 2008 Feb 1;197(3):465-73. doi: 10.1086/525048. PubMed PMID: 18184091.

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Barbier M, Agustí A, Albertí S. Fluticasone propionate reduces bacterial airway epithelial invasion. Eur Respir J. 2008 Nov;32(5):1283-8. doi: 10.1183/09031936.00020608. Epub 2008 Aug 6. PubMed PMID: 18684852.

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García-Sureda L, Doménech-Sánchez A, Barbier M, Juan C, Gascó J, Albertí S. OmpK26, a novel porin associated with carbapenem resistance in Klebsiella pneumoniae. Antimicrob Agents Chemother. 2011 Oct;55(10):4742-7. doi: 10.1128/AAC.00309-11. Epub 2011 Aug 1. PubMed PMID: 21807980; PubMed Central PMCID: PMC3186958.

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Barbier M, Martínez-Ramos I, Townsend P, Albertí S. Surfactant protein A blocks recognition of Pseudomonas aeruginosa by CKAP4/P63 on airway epithelial cells. J Infect Dis. 2012 Dec 1;206(11):1753-62. doi: 10.1093/infdis/jis587. Epub 2012 Sep 10. PubMed PMID: 22966120.

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Damron FH, McKenney ES, Barbier M, Liechti GW, Schweizer HP, Goldberg JB. Construction of mobilizable mini-Tn7 vectors for bioluminescent detection of gram-negative bacteria and single-copy promoter lux reporter analysis. Appl Environ Microbiol. 2013 Jul;79(13):4149-53. doi: 10.1128/AEM.00640-13. Epub 2013 Apr 12. PubMed PMID: 23584769; PubMed Central PMCID: PMC3697578.

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Barbier M, Owings JP, Martínez-Ramos I, Damron FH, Gomila R, Blázquez J, Goldberg JB, Albertí S. Lysine trimethylation of EF-Tu mimics platelet-activating factor to initiate Pseudomonas aeruginosa pneumonia. mBio. 2013 May 7;4(3):e00207-13. doi: 10.1128/mBio.00207-13. PubMed PMID: 23653444; PubMed Central PMCID: PMC3663188.

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Damron FH, Barbier M, McKenney ES, Schurr MJ, Goldberg JB. Genes required for and effects of alginate overproduction induced by growth of Pseudomonas aeruginosa on Pseudomonas isolation agar supplemented with ammonium metavanadate. J Bacteriol. 2013 Sep;195(18):4020-36. doi: 10.1128/JB.00534-13. Epub 2013 Jun 21. PubMed PMID: 23794622; PubMed Central PMCID: PMC3754734.

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Martínez-Ramos I, Mulet X, Moyá B, Barbier M, Oliver A, Albertí S. Overexpression of MexCD-OprJ reduces Pseudomonas aeruginosa virulence by increasing its susceptibility to complement-mediated killing. Antimicrob Agents Chemother. 2014;58(4):2426-9. doi: 10.1128/AAC.02012-13. Epub 2014 Jan 13. PubMed PMID: 24419345; PubMed Central PMCID: PMC4023748.

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Barbier M, Damron FH, Bielecki P, Suárez-Diez M, Puchałka J, Albertí S, Dos Santos VM, Goldberg JB. From the environment to the host: re-wiring of the transcriptome of Pseudomonas aeruginosa from 22°C to 37°C. PLoS One. 2014;9(2):e89941. doi: 10.1371/journal.pone.0089941. eCollection 2014. PubMed PMID: 24587139; PubMed Central PMCID: PMC3933690.

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Barbier M, Mittar D. Novel fluorescent reporters for studying host-pathogen interactions. Nature Methods Application Notes. 2014 October. doi: 10.1038/an9586.

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Varga JJ, Barbier M, Mulet X, Bielecki P, Bartell JA, Owings JP, Martinez-Ramos I, Hittle LE, Davis MR Jr, Damron FH, Liechti GW, Puchałka J, dos Santos VA, Ernst RK, Papin JA, Albertí S, Oliver A, Goldberg JB. Genotypic and phenotypic analyses of a Pseudomonas aeruginosa chronic bronchiectasis isolate reveal differences from cystic fibrosis and laboratory strains. BMC Genomics. 2015 Oct 30;16:883. doi: 10.1186/s12864-015-2069-0. PubMed PMID: 26519161; PubMed Central PMCID: PMC4628258.

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Barbier M, Damron FH. Rainbow Vectors for Broad-Range Bacterial Fluorescence Labeling. PLoS One. 2016;11(3):e0146827. doi: 10.1371/journal.pone.0146827. eCollection 2016. PubMed PMID: 26937640; PubMed Central PMCID: PMC4777285.

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Damron FH, Oglesby-Sherrouse AG, Wilks A, Barbier M. Dual-seq transcriptomics reveals the battle for iron during Pseudomonas aeruginosa acute murine pneumonia. Sci Rep. 2016 Dec 16;6:39172. doi: 10.1038/srep39172. PubMed PMID: 27982111; PubMed Central PMCID: PMC5159919.

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Barbier M, Boehm DT, Sen-Kilic E, Bonnin C, Pinheiro T, Hoffman C, Gray M, Hewlett E, Damron FH. Modulation of Pertussis and Adenylate Cyclase Toxins by Sigma Factor RpoE in Bordetella pertussis. Infect Immun. 2017 Jan;85(1). doi: 10.1128/IAI.00565-16. Print 2017 Jan. PubMed PMID: 27849178; PubMed Central PMCID: PMC5203664.

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Reinhart AA, Nguyen AT, Brewer LK, Bevere J, Jones JW, Kane MA, Damron FH, Barbier M, Oglesby-Sherrouse AG. The Pseudomonas aeruginosa PrrF Small RNAs Regulate Iron Homeostasis during Acute Murine Lung Infection. Infect Immun. 2017 May;85(5). doi: 10.1128/IAI.00764-16. Print 2017 May. PubMed PMID: 28289146; PubMed Central PMCID: PMC5400841.

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Little AS, Okkotsu Y, Reinhart AA, Damron FH, Barbier M, Barrett B, Oglesby-Sherrouse AG, Goldberg JB, Cody WL, Schurr MJ, Vasil ML, Schurr MJ. Pseudomonas aeruginosa AlgR Phosphorylation Status Differentially Regulates Pyocyanin and Pyoverdine Production. mBio. 2018 Jan 30;9(1). doi: 10.1128/mBio.02318-17. PubMed PMID: 29382736; PubMed Central PMCID: PMC5790918.

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Boehm DT, Hall JM, Wong TY, DiVenere AM, Sen-Kilic E, Bevere JR, Bradford SD, Blackwood CB, Elkins CM, DeRoos KA, Gray MC, Cooper CG, Varney ME, Maynard JA, Hewlett EL, Barbier M, Damron FH. Evaluation of Adenylate Cyclase Toxoid Antigen in Acellular Pertussis Vaccines by Using a Bordetella pertussis Challenge Model in Mice. Infect Immun. 2018 Oct;86(10). doi: 10.1128/IAI.00857-17. Print 2018 Oct. PubMed PMID: 30012638; PubMed Central PMCID: PMC6204743.

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Varney ME, Boehm DT, DeRoos K, Nowak ES, Wong TY, Sen-Kilic E, Bradford SD, Elkins C, Epperly MS, Witt WT, Barbier M, Damron FH. Bordetella pertussis Whole Cell Immunization, Unlike Acellular Immunization, Mimics Naïve Infection by Driving Hematopoietic Stem and Progenitor Cell Expansion in Mice. Front Immunol. 2018;9:2376. doi: 10.3389/fimmu.2018.02376. eCollection 2018. PubMed PMID: 30405604; PubMed Central PMCID: PMC6200895.

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Barbier M, Bevere J, Damron FH. In Vivo Bacterial Imaging Using Bioluminescence. Methods Mol Biol. 2018;1790:87-97. doi: 10.1007/978-1-4939-7860-1_7. PubMed PMID: 29858785.

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Wong TY, Hall JM, Nowak ES, Boehm DT, Gonyar LA, Hewlett EL, Eby JC, Barbier M, Damron FH. Analysis of the In Vivo Transcriptome of Bordetella pertussis during Infection of Mice. mSphere. 2019 Apr 17;4(2). doi: 10.1128/mSphereDirect.00154-19. PubMed PMID: 30996109; PubMed Central PMCID: PMC6470212.

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Keener TA, Galvez Peralta M, Smith M, Swager L, Ingles J, Wen S, Barbier M. Student and faculty perceptions: appropriate consequences of lapses in academic integrity in health sciences education. BMC Med Educ. 2019 Jun 13;19(1):209. doi: 10.1186/s12909-019-1645-4. PubMed PMID: 31196066; PubMed Central PMCID: PMC6567607.

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Boehm DT, Wolf MA, Hall JM, Wong TY, Sen-Kilic E, Basinger HD, Dziadowicz SA, Gutierrez MP, Blackwood CB, Bradford SD, Begley KA, Witt WT, Varney ME, Barbier M, Damron FH. Intranasal acellular pertussis vaccine provides mucosal immunity and protects mice from Bordetella pertussis. NPJ Vaccines. 2019;4:40. doi: 10.1038/s41541-019-0136-2. eCollection 2019. PubMed PMID: 31602318; PubMed Central PMCID: PMC6776550.

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Sen-Kilic E, Blackwood CB, Boehm DT, Witt WT, Malkowski AC, Bevere JR, Wong TY, Hall JM, Bradford SD, Varney ME, Damron FH, Barbier M. Intranasal Peptide-Based FpvA-KLH Conjugate Vaccine Protects Mice From Pseudomonas aeruginosa Acute Murine Pneumonia. Front Immunol. 2019;10:2497. doi: 10.3389/fimmu.2019.02497. eCollection 2019. PubMed PMID: 31708925; PubMed Central PMCID: PMC6819369.

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Gestal MC, Howard LK, Dewan K, Johnson HM, Barbier M, Bryant C, Soumana IH, Rivera I, Linz B, Blas-Machado U, Harvill ET. Enhancement of immune response against Bordetella spp. by disrupting immunomodulation. Sci Rep. 2019 Dec 30;9(1):20261. doi: 10.1038/s41598-019-56652-z. PubMed PMID: 31889098; PubMed Central PMCID: PMC6937331.

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Brewer LK, Jones JW, Blackwood CB, Barbier M, Oglesby-Sherrouse A, Kane MA. Development and bioanalytical method validation of an LC-MS/MS assay for simultaneous quantitation of 2-alkyl-4(1H)-quinolones for application in bacterial cell culture and lung tissue. Anal Bioanal Chem. 2020 Mar;412(7):1521-1534. doi: 10.1007/s00216-019-02374-0. Epub 2020 Jan 29. PubMed PMID: 31993728; PubMed Central PMCID: PMC7223165.

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Seman BG, Vance JK, Rawson TW, Witt MR, Huckaby AB, Povroznik JM, Bradford SD, Barbier M, Robinson CM. Elevated Levels of Interleukin-27 in Early Life Compromise Protective Immunity in a Mouse Model of Gram-Negative Neonatal Sepsis. Infect Immun. 2020 Feb 20;88(3). doi: 10.1128/IAI.00828-19. Print 2020 Feb 20. PubMed PMID: 31818960; PubMed Central PMCID: PMC7035946.

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Damron FH, Barbier M, Dubey P, Edwards KM, Gu XX, Klein NP, Lu K, Mills KHG, Pasetti MF, Read RC, Rohani P, Sebo P, Harvill ET. Overcoming Waning Immunity in Pertussis Vaccines: Workshop of the National Institute of Allergy and Infectious Diseases. J Immunol. 2020 Aug 15;205(4):877-882. doi: 10.4049/jimmunol.2000676. Review. PubMed PMID: 32769142; PubMed Central PMCID: PMC7454230.

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Blackwood CB, Sen-Kilic E, Boehm DT, Hall JM, Varney ME, Wong TY, Bradford SD, Bevere JR, Witt WT, Damron FH, Barbier M. Innate and Adaptive Immune Responses against Bordetella pertussis and Pseudomonas aeruginosa in a Murine Model of Mucosal Vaccination against Respiratory Infection. Vaccines (Basel). 2020 Nov 3;8(4). doi: 10.3390/vaccines8040647. PubMed PMID: 33153066; PubMed Central PMCID: PMC7712645.

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Grund ME, Choi SJ, McNitt DH, Barbier M, Hu G, LaSala PR, Cote CK, Berisio R, Lukomski S. Burkholderia collagen-like protein 8, Bucl8, is a unique outer membrane component of a putative tetrapartite efflux pump in Burkholderia pseudomallei and Burkholderia mallei. PLoS One. 2020;15(11):e0242593. doi: 10.1371/journal.pone.0242593. eCollection 2020. PubMed PMID: 33227031; PubMed Central PMCID: PMC7682875.

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Sen-Kilic E, Blackwood CB, Huckaby AB, Horspool AM, Weaver KL, Malkowski AC, Witt WT, Bevere JR, Damron FH, Barbier M. Defining the Mechanistic Correlates of Protection Conferred by Whole-Cell Vaccination against Pseudomonas aeruginosa Acute Murine Pneumonia. Infect Immun. 2021 Jan 19;89(2). doi: 10.1128/IAI.00451-20. Print 2021 Jan 19. PubMed PMID: 33199354; PubMed Central PMCID: PMC7822147.

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Horspool AM, Kieffer T, Russ BP, DeJong MA, Wolf MA, Karakiozis JM, Hickey BJ, Fagone P, Tacker DH, Bevere JR, Martinez I, Barbier M, Perrotta PL, Damron FH. Interplay of Antibody and Cytokine Production Reveals CXCL13 as a Potential Novel Biomarker of Lethal SARS-CoV-2 Infection. mSphere. 2021 Jan 20;6(1). doi: 10.1128/mSphere.01324-20. PubMed PMID: 33472985; PubMed Central PMCID: PMC7845617.

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Wolf MA, Boehm DT, DeJong MA, Wong TY, Sen-Kilic E, Hall JM, Blackwood CB, Weaver KL, Kelly CO, Kisamore CA, Bitzer GJ, Bevere JR, Barbier M, Damron FH. Intranasal Immunization with Acellular Pertussis Vaccines Results in Long-Term Immunity to Bordetella pertussis in Mice. Infect Immun. 2021 Feb 16;89(3). doi: 10.1128/IAI.00607-20. Print 2021 Feb 16. PubMed PMID: 33318136; PubMed Central PMCID: PMC8097269.

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Schaller MD, Barbier M. FastTrack, a strategy to shorten time to degree. FASEB Bioadv. 2021 Jul;3(7):482-489. doi: 10.1096/fba.2020-00144. eCollection 2021 Jul. PubMed PMID: 34258517; PubMed Central PMCID: PMC8255847.

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Hall JM, Kang J, Kenney SM, Wong TY, Bitzer GJ, Kelly CO, Kisamore CA, Boehm DT, DeJong MA, Wolf MA, Sen-Kilic E, Horspool AM, Bevere JR, Barbier M, Damron FH. Reinvestigating the Coughing Rat Model of Pertussis To Understand Bordetella pertussis Pathogenesis. Infect Immun. 2021 Nov 16;89(12):e0030421. doi: 10.1128/IAI.00304-21. Epub 2021 Jun 14. PubMed PMID: 34125597; PubMed Central PMCID: PMC8594615.

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Hall JM, Bitzer GJ, DeJong MA, Kang J, Wong TY, Wolf MA, Bevere JR, Barbier M, Damron FH. Mucosal Immunization with DTaP Confers Protection against Bordetella pertussis Infection and Cough in Sprague-Dawley Rats. Infect Immun. 2021 Nov 16;89(12):e0034621. doi: 10.1128/IAI.00346-21. Epub 2021 Sep 13. PubMed PMID: 34516235; PubMed Central PMCID: PMC8594602.

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Wolf MA, Boehm DT, DeJong MA, Wong TY, Sen-Kilic E, Hall JM, Blackwood CB, Weaver KL, Kelly CO, Kisamore CA, Bitzer GJ, Bevere JR, Barbier M, Damron FH. Erratum for Wolf et al., "Intranasal Immunization with Acellular Pertussis Vaccines Results in Long-Term Immunity to Bordetella pertussis in Mice". Infect Immun. 2021 Sep 16;89(10):e0028521. doi: 10.1128/IAI.00285-21. Epub 2021 Sep 16. PubMed PMID: 34528854; PubMed Central PMCID: PMC8445187.

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Wong TY, Horspool AM, Russ BP, Ye C, Lee KS, Winters MT, Bevere JR, Miller OA, Rader NA, Cooper M, Kieffer T, Sourimant J, Greninger AL, Plemper RK, Denvir J, Cyphert HA, Barbier M, Torrelles JB, Martinez I, Martinez-Sobrido L, Damron FH. Evaluating Antibody Mediated Protection against Alpha, Beta, and Delta SARS-CoV-2 Variants of Concern in K18-hACE2 Transgenic Mice. J Virol. 2022 Mar 23;96(6):e0218421. doi: 10.1128/jvi.02184-21. Epub 2022 Jan 26. PubMed PMID: 35080423; PubMed Central PMCID: PMC8941865.

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Weaver KL, Blackwood CB, Horspool AM, Pyles GM, Sen-Kilic E, Grayson EM, Huckaby AB, Witt WT, DeJong MA, Wolf MA, Damron FH, Barbier M. Long-Term Analysis of Pertussis Vaccine Immunity to Identify Potential Markers of Vaccine-Induced Memory Associated With Whole Cell But Not Acellular Pertussis Immunization in Mice. Front Immunol. 2022;13:838504. doi: 10.3389/fimmu.2022.838504. eCollection 2022. PubMed PMID: 35211125; PubMed Central PMCID: PMC8861382.

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Wong TY, Lee KS, Russ BP, Horspool AM, Kang J, Winters MT, Allison Wolf M, Rader NA, Miller OA, Shiflett M, Izac J, Varisco D, Sen-Kilic E, Cunningham C, Cooper M, Cyphert HA, Barbier M, Martinez I, Bevere JR, Ernst RK, Damron FH. Intranasal administration of BReC-CoV-2 COVID-19 vaccine protects K18-hACE2 mice against lethal SARS-CoV-2 challenge. NPJ Vaccines. 2022 Mar 14;7(1):36. doi: 10.1038/s41541-022-00451-7. PubMed PMID: 35288576; PubMed Central PMCID: PMC8921182.

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Sen-Kilic E, Huckaby AB, Damron FH, Barbier M. P. aeruginosa type III and type VI secretion systems modulate early response gene expression in type II pneumocytes in vitro. BMC Genomics. 2022 May 4;23(1):345. doi: 10.1186/s12864-022-08554-0. PubMed PMID: 35508983; PubMed Central PMCID: PMC9068226.

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Kayastha BB, Kubo A, Burch-Konda J, Dohmen RL, McCoy JL, Rogers RR, Mares S, Bevere J, Huckaby A, Witt W, Peng S, Chaudhary B, Mohanty S, Barbier M, Cook G, Deng J, Patrauchan MA. EF-hand protein, EfhP, specifically binds Ca(2+) and mediates Ca(2+) regulation of virulence in a human pathogen Pseudomonas aeruginosa. Sci Rep. 2022 May 25;12(1):8791. doi: 10.1038/s41598-022-12584-9. PubMed PMID: 35614085; PubMed Central PMCID: PMC9132961.

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DeJong MA, Wolf MA, Bitzer GJ, Hall JM, Sen-Kilic E, Blake JM, Petty JE, Wong TY, Barbier M, Campbell JD, Bevere JR, Damron FH. CpG 1018® adjuvant enhances Tdap immune responses against Bordetella pertussis in mice. Vaccine. 2022 Aug 19;40(35):5229-5240. doi: 10.1016/j.vaccine.2022.07.030. Epub 2022 Aug 1. PubMed PMID: 35927132.

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Wong TY, Russ BP, Lee KS, Miller OA, Kang J, Cooper M, Winters MT, Rodriguez-Aponte SA, Dalvie NC, Johnston RS, Rader NA, Wong ZY, Cyphert HA, Martinez I, Shaligram U, Batwal S, Lothe R, Chandrasekaran R, Nagar G, Rajurkar M, Rao H, Bevere JR, Barbier M, Love JC, Damron FH. RBD-VLP Vaccines Adjuvanted with Alum or SWE Protect K18-hACE2 Mice against SARS-CoV-2 VOC Challenge. mSphere. 2022 Aug 31;7(4):e0024322. doi: 10.1128/msphere.00243-22. Epub 2022 Aug 15. PubMed PMID: 35968964; PubMed Central PMCID: PMC9429941.

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Barbier M, Lee KS, Vikharankar MS, Rajpathak SN, Kadam N, Wong TY, Russ BP, Cyphert HA, Miller OA, Rader NA, Cooper M, Kang J, Sen-Kilic E, Wong ZY, Winters MT, Bevere JR, Martinez I, Devarumath R, Shaligram US, Damron FH. Passive immunization with equine RBD-specific Fab protects K18-hACE2-mice against Alpha or Beta variants of SARS-CoV-2. Front Immunol. 2022;13:948431. doi: 10.3389/fimmu.2022.948431. eCollection 2022. PubMed PMID: 36091051; PubMed Central PMCID: PMC9450042.

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Lee KS, Wong TY, Russ BP, Horspool AM, Miller OA, Rader NA, Givi JP, Winters MT, Wong ZYA, Cyphert HA, Denvir J, Stoilov P, Barbier M, Roan NR, Amin MS, Martinez I, Bevere JR, Damron FH. SARS-CoV-2 Delta variant induces enhanced pathology and inflammatory responses in K18-hACE2 mice. PLoS One. 2022;17(8):e0273430. doi: 10.1371/journal.pone.0273430. eCollection 2022. PubMed PMID: 36037222; PubMed Central PMCID: PMC9423646.

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Lee KS, Russ BP, Wong TY, Horspool AM, Winters MT, Barbier M, Bevere JR, Martinez I, Damron FH, Cyphert HA. Obesity and metabolic dysfunction drive sex-associated differential disease profiles in hACE2-mice challenged with SARS-CoV-2. iScience. 2022 Oct 21;25(10):105038. doi: 10.1016/j.isci.2022.105038. Epub 2022 Sep 2. PubMed PMID: 36068847; PubMed Central PMCID: PMC9436780.

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Blackwood CB, Mateu-Borrás M, Sen-Kilic E, Pyles GM, Miller SJ, Weaver KL, Witt WT, Huckaby AB, Kang J, Chandler CE, Ernst RK, Heath Damron F, Barbier M. Bordetella pertussis whole cell immunization protects against Pseudomonas aeruginosa infections. NPJ Vaccines. 2022 Nov 10;7(1):143. doi: 10.1038/s41541-022-00562-1. PubMed PMID: 36357402; PubMed Central PMCID: PMC9649022.

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Rodriguez-Aponte SA, Dalvie NC, Wong TY, Johnston RS, Naranjo CA, Bajoria S, Kumru OS, Kaur K, Russ BP, Lee KS, Cyphert HA, Barbier M, Rao HD, Rajurkar MP, Lothe RR, Shaligram US, Batwal S, Chandrasekaran R, Nagar G, Kleanthous H, Biswas S, Bevere JR, Joshi SB, Volkin DB, Damron FH, Love JC. Molecular engineering of a cryptic epitope in Spike RBD improves manufacturability and neutralizing breadth against SARS-CoV-2 variants. Vaccine. 2023 Jan 27;41(5):1108-1118. doi: 10.1016/j.vaccine.2022.12.062. Epub 2022 Dec 29. PubMed PMID: 36610932; PubMed Central PMCID: PMC9797419.

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Bitzer G, Weaver K, Barbier M, Damron FH. Protocol for aerosolization challenge of mice with Bordetella pertussis. STAR Protoc. 2023 Mar 17;4(1):101979. doi: 10.1016/j.xpro.2022.101979. Epub 2023 Jan 3. PubMed PMID: 36598856; PubMed Central PMCID: PMC9826968.

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Hoang TM, Huang W, Gans J, Nowak E, Barbier M, Wilks A, Kane MA, Oglesby AG. The heme-responsive PrrH sRNA regulates Pseudomonas aeruginosa pyochelin gene expression. bioRxiv. 2023 Jan 20;. doi: 10.1101/2023.01.19.524833. PubMed PMID: 36712080; PubMed Central PMCID: PMC9882372.