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Little AE, Robinson CJ, Peterson SB, Raffa KF, Handelsman J. Rules of engagement: interspecies interactions that regulate microbial communities. Annu Rev Microbiol. 2008;62:375-401. doi: 10.1146/annurev.micro.030608.101423. Review. PubMed PMID: 18544040.
Borlee BR, Geske GD, Robinson CJ, Blackwell HE, Handelsman J. Quorum-sensing signals in the microbial community of the cabbage white butterfly larval midgut. ISME J. 2008 Nov;2(11):1101-11. doi: 10.1038/ismej.2008.70. Epub 2008 Jul 24. PubMed PMID: 18650927; PubMed Central PMCID: PMC3904650.
Broderick NA, Robinson CJ, McMahon MD, Holt J, Handelsman J, Raffa KF. Contributions of gut bacteria to Bacillus thuringiensis-induced mortality vary across a range of Lepidoptera. BMC Biol. 2009 Mar 4;7:11. doi: 10.1186/1741-7007-7-11. PubMed PMID: 19261175; PubMed Central PMCID: PMC2653032.
Schloss PD, Westcott SL, Ryabin T, Hall JR, Hartmann M, Hollister EB, Lesniewski RA, Oakley BB, Parks DH, Robinson CJ, Sahl JW, Stres B, Thallinger GG, Van Horn DJ, Weber CF. Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol. 2009 Dec;75(23):7537-41. doi: 10.1128/AEM.01541-09. Epub 2009 Oct 2. PubMed PMID: 19801464; PubMed Central PMCID: PMC2786419.
Robinson CJ, Schloss P, Ramos Y, Raffa K, Handelsman J. Robustness of the bacterial community in the cabbage white butterfly larval midgut. Microb Ecol. 2010 Feb;59(2):199-211. doi: 10.1007/s00248-009-9595-8. PubMed PMID: 19924467; PubMed Central PMCID: PMC2836246.
Robinson CJ, Young VB. Antibiotic administration alters the community structure of the gastrointestinal micobiota. Gut Microbes. 2010 Jul;1(4):279-284. doi: 10.4161/gmic.1.4.12614. Epub 2010 May 24. PubMed PMID: 20953272; PubMed Central PMCID: PMC2954510.
Robinson CJ, Bohannan BJ, Young VB. From structure to function: the ecology of host-associated microbial communities. Microbiol Mol Biol Rev. 2010 Sep;74(3):453-76. doi: 10.1128/MMBR.00014-10. Review. PubMed PMID: 20805407; PubMed Central PMCID: PMC2937523.
Nagalingam NA, Robinson CJ, Bergin IL, Eaton KA, Huffnagle GB, Young VB. The effects of intestinal microbial community structure on disease manifestation in IL-10-/- mice infected with Helicobacter hepaticus. Microbiome. 2013 May 10;1(1):15. doi: 10.1186/2049-2618-1-15. PubMed PMID: 24450737; PubMed Central PMCID: PMC3971628.
Pope WH, Bowman CA, Russell DA, Jacobs-Sera D, Asai DJ, Cresawn SG, Jacobs WR, Hendrix RW, Lawrence JG, Hatfull GF. Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity. Elife. 2015 Apr 28;4:e06416. doi: 10.7554/eLife.06416. PubMed PMID: 25919952; PubMed Central PMCID: PMC4408529.
McKinnon LM, Robinson CJ. Impact of the glucosinolate sinigrin on bacterial communities in Pieris rapae. Advances in microbiology. 2016 July; 6:566. doi: 10.4236/aim.2016.68057.
Robinson CJ, London-Thomas LY, Dickson LA, Clinton TA, Baig H, Bute M, Fahad M, Farrakhan K, Grady N, Guthrie NE, Hafid R, Harvey J, Hunnicutt K, Larsen VL, McDuffie T, McGee EN, Pailin JY, Peacock B, Thomas A, Anderson WA. Genome Sequence of Mycobacteriophage ErnieJ. Genome Announc. 2016 Nov 23;4(6). doi: 10.1128/genomeA.00873-16. PubMed PMID: 27881532; PubMed Central PMCID: PMC5122674.
Dedrick RM, Jacobs-Sera D, Bustamante CA, Garlena RA, Mavrich TN, Pope WH, Reyes JC, Russell DA, Adair T, Alvey R, Bonilla JA, Bricker JS, Brown BR, Byrnes D, Cresawn SG, Davis WB, Dickson LA, Edgington NP, Findley AM, Golebiewska U, Grose JH, Hayes CF, Hughes LE, Hutchison KW, Isern S, Johnson AA, Kenna MA, Klyczek KK, Mageeney CM, Michael SF, Molloy SD, Montgomery MT, Neitzel J, Page ST, Pizzorno MC, Poxleitner MK, Rinehart CA, Robinson CJ, Rubin MR, Teyim JN, Vazquez E, Ware VC, Washington J, Hatfull GF. Prophage-mediated defence against viral attack and viral counter-defence. Nat Microbiol. 2017 Jan 9;2:16251. doi: 10.1038/nmicrobiol.2016.251. PubMed PMID: 28067906; PubMed Central PMCID: PMC5508108.
Hanauer DI, Graham MJ, Betancur L, Bobrownicki A, Cresawn SG, Garlena RA, Jacobs-Sera D, Kaufmann N, Pope WH, Russell DA, Jacobs WR Jr, Sivanathan V, Asai DJ, Hatfull GF. An inclusive Research Education Community (iREC): Impact of the SEA-PHAGES program on research outcomes and student learning. Proc Natl Acad Sci U S A. 2017 Dec 19;114(51):13531-13536. doi: 10.1073/pnas.1718188115. Epub 2017 Dec 5. PubMed PMID: 29208718; PubMed Central PMCID: PMC5754813.
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