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Knosp BM, Barnett WK, Anderson NR, Embi PJ. Corrigendum: Research IT maturity models for academic health centers: Early development and initial evaluation. J Clin Transl Sci. 2019 Feb;3(1):45. doi: 10.1017/cts.2019.374. eCollection 2019 Feb. PubMed PMID: 31660226; PubMed Central PMCID: PMC6798942.
Embi PJ, Richesson R, Tenenbaum J, Kannry J, Friedman C, Sarkar IN, Smith J. Reimagining the research-practice relationship: policy recommendations for informatics-enabled evidence-generation across the US health system. JAMIA Open. 2019 Apr;2(1):2-9. doi: 10.1093/jamiaopen/ooy056. eCollection 2019 Apr. PubMed PMID: 31984339; PubMed Central PMCID: PMC6951885.
Obeid JS, Tarczy-Hornoch P, Harris PA, Barnett WK, Anderson NR, Embi PJ, Hogan WR, Bell DS, McIntosh LD, Knosp B, Tachinardi U, Cimino JJ, Wehbe FH. Sustainability considerations for clinical and translational research informatics infrastructure. J Clin Transl Sci. 2018 Oct;2(5):267-275. doi: 10.1017/cts.2018.332. Epub 2018 Dec 5. PubMed PMID: 30828467; PubMed Central PMCID: PMC6390401.
Petersen C, Berner ES, Embi PJ, Fultz Hollis K, Goodman KW, Koppel R, Lehmann CU, Lehmann H, Maulden SA, McGregor KA, Solomonides A, Subbian V, Terrazas E, Winkelstein P. AMIA's code of professional and ethical conduct 2018. J Am Med Inform Assoc. 2018 Nov 1;25(11):1579-1582. doi: 10.1093/jamia/ocy092. PubMed PMID: 30329055.
Knosp BM, Barnett WK, Anderson NR, Embi PJ. Research IT maturity models for academic health centers: Early development and initial evaluation. J Clin Transl Sci. 2018 Oct;2(5):289-294. doi: 10.1017/cts.2018.339. PubMed PMID: 30828469; PubMed Central PMCID: PMC6390403.
Dixon BE, Embi PJ, Haggstrom DA. Information technologies that facilitate care coordination: provider and patient perspectives. Transl Behav Med. 2018 May 23;8(3):522-525. doi: 10.1093/tbm/ibx086. PubMed PMID: 29800411.
Wright A, Ai A, Ash J, Wiesen JF, Hickman TT, Aaron S, McEvoy D, Borkowsky S, Dissanayake PI, Embi P, Galanter W, Harper J, Kassakian SZ, Ramoni R, Schreiber R, Sirajuddin A, Bates DW, Sittig DF. Clinical decision support alert malfunctions: analysis and empirically derived taxonomy. J Am Med Inform Assoc. 2018 May 1;25(5):496-506. doi: 10.1093/jamia/ocx106. PubMed PMID: 29045651; PubMed Central PMCID: PMC6019061.
Luzum JA, Pakyz RE, Elsey AR, Haidar CE, Peterson JF, Whirl-Carrillo M, Handelman SK, Palmer K, Pulley JM, Beller M, Schildcrout JS, Field JR, Weitzel KW, Cooper-DeHoff RM, Cavallari LH, O'Donnell PH, Altman RB, Pereira N, Ratain MJ, Roden DM, Embi PJ, Sadee W, Klein TE, Johnson JA, Relling MV, Wang L, Weinshilboum RM, Shuldiner AR, Freimuth RR. The Pharmacogenomics Research Network Translational Pharmacogenetics Program: Outcomes and Metrics of Pharmacogenetic Implementations Across Diverse Healthcare Systems. Clin Pharmacol Ther. 2017 Sep;102(3):502-510. doi: 10.1002/cpt.630. Epub 2017 Jun 9. PubMed PMID: 28090649; PubMed Central PMCID: PMC5511786.
Adler-Milstein J, Embi PJ, Middleton B, Sarkar IN, Smith J. Crossing the health IT chasm: considerations and policy recommendations to overcome current challenges and enable value-based care. J Am Med Inform Assoc. 2017 Sep 1;24(5):1036-1043. doi: 10.1093/jamia/ocx017. PubMed PMID: 28340128.
Sanchez-Pinto LN, Mosa ASM, Fultz-Hollis K, Tachinardi U, Barnett WK, Embi PJ. The Emerging Role of the Chief Research Informatics Officer in Academic Health Centers. Appl Clin Inform. 2017 Aug 16;8(3):845-853. doi: 10.4338/ACI-2017-04-RA-0062. PubMed PMID: 28832068; PubMed Central PMCID: PMC6220697.
Obeid JS, Beskow LM, Rape M, Gouripeddi R, Black RA, Cimino JJ, Embi PJ, Weng C, Marnocha R, Buse JB. A survey of practices for the use of electronic health records to support research recruitment. J Clin Transl Sci. 2017 Aug;1(4):246-252. doi: 10.1017/cts.2017.301. PubMed PMID: 29657859; PubMed Central PMCID: PMC5890320.
Finney Rutten LJ, Alexander A, Embi PJ, Flores G, Friedman C, Haller IV, Haug P, Jensen D, Khosla S, Runger G, Shah ND, Winden T, Roger VL. Patient-Centered Network of Learning Health Systems: Developing a resource for clinical translational research. J Clin Transl Sci. 2017 Feb;1(1):40-44. doi: 10.1017/cts.2016.11. Epub 2017 Feb 2. PubMed PMID: 28515960; PubMed Central PMCID: PMC5413962.
Lowes LP, Noritz GH, Newmeyer A, Embi PJ, Yin H, Smoyer WE. 'Learn From Every Patient': implementation and early results of a learning health system. Dev Med Child Neurol. 2017 Feb;59(2):183-191. doi: 10.1111/dmcn.13227. Epub 2016 Aug 22. PubMed PMID: 27545839.
Wright A, Hickman TT, McEvoy D, Aaron S, Ai A, Ash JS, Andersen JM, Ramoni R, Hauskrecht M, Embi P, Schreiber R, Sittig DF, Bates DW. Methods for Detecting Malfunctions in Clinical Decision Support Systems. Stud Health Technol Inform. 2017;245:1385. PubMed PMID: 29295464.
Smoyer WE, Embi PJ, Moffatt-Bruce S. Creating Local Learning Health Systems: Think Globally, Act Locally. JAMA. 2016 Dec 20;316(23):2481-2482. doi: 10.1001/jama.2016.16459. PubMed PMID: 27997662.
Yen PY, Lara B, Lopetegui M, Bharat A, Ardoin S, Johnson B, Mathur P, Embi PJ, Curtis JR. Usability and Workflow Evaluation of "RhEumAtic Disease activitY" (READY). A Mobile Application for Rheumatology Patients and Providers. Appl Clin Inform. 2016 Nov 2;7(4):1007-1024. doi: 10.4338/ACI-2016-03-RA-0036. PubMed PMID: 27803949; PubMed Central PMCID: PMC5228141.
Embi PJ, Tenenbaum JD. More on Data Sharing. N Engl J Med. 2016 May 12;374(19):1896. doi: 10.1056/NEJMc1602586. PubMed PMID: 27168446.
Payne PR, Lussier Y, Foraker RE, Embi PJ. Rethinking the role and impact of health information technology: informatics as an interventional discipline. BMC Med Inform Decis Mak. 2016 Mar 29;16:40. doi: 10.1186/s12911-016-0278-3. Review. PubMed PMID: 27025583; PubMed Central PMCID: PMC4812636.
Embi PJ, Tsevat J. In Reply to Severance. Acad Med. 2016 Jan;91(1):10. doi: 10.1097/ACM.0000000000001012. PubMed PMID: 26714133.
Lehmann CU, Longhurst CA, Hersh W, Mohan V, Levy BP, Embi PJ, Finnell JT, Turner AM, Martin R, Williamson J, Munger B. Clinical Informatics Fellowship Programs: In Search of a Viable Financial Model: An open letter to the Centers for Medicare and Medicaid Services. Appl Clin Inform. 2015;6(2):267-70. doi: 10.4338/ACI-2015-03-IE-0030. eCollection 2015. PubMed PMID: 26171074; PubMed Central PMCID: PMC4493329.
Patel VN, Kaelber DC. Using aggregated, de-identified electronic health record data for multivariate pharmacosurveillance: a case study of azathioprine. J Biomed Inform. 2014 Dec;52:36-42. doi: 10.1016/j.jbi.2013.10.009. Epub 2013 Oct 28. PubMed PMID: 24177317; PubMed Central PMCID: PMC4002671.
Wyatt MC, Hendrickson RC, Ames M, Bondy J, Ranauro P, English TM, Bobitt K, Davidson A, Houston TK, Embi PJ, Berner ES. Federated Aggregate Cohort Estimator (FACE): an easy to deploy, vendor neutral, multi-institutional cohort query architecture. J Biomed Inform. 2014 Dec;52:65-71. doi: 10.1016/j.jbi.2013.11.009. Epub 2013 Dec 4. PubMed PMID: 24316052; PubMed Central PMCID: PMC4045656.
Sim I, Tu SW, Carini S, Lehmann HP, Pollock BH, Peleg M, Wittkowski KM. The Ontology of Clinical Research (OCRe): an informatics foundation for the science of clinical research. J Biomed Inform. 2014 Dec;52:78-91. doi: 10.1016/j.jbi.2013.11.002. Epub 2013 Nov 13. PubMed PMID: 24239612; PubMed Central PMCID: PMC4019723.
Embi PJ, Payne PR. Advancing methodologies in Clinical Research Informatics (CRI): foundational work for a maturing field. J Biomed Inform. 2014 Dec;52:1-3. doi: 10.1016/j.jbi.2014.10.007. PubMed PMID: 25484113.
Wilcox A, Randhawa G, Embi P, Cao H, Kuperman GJ. Sustainability considerations for health research and analytic data infrastructures. EGEMS (Wash DC). 2014;2(2):1113. doi: 10.13063/2327-9214.1113. eCollection 2014. PubMed PMID: 25848610; PubMed Central PMCID: PMC4371522.
Hebert C, Shivade C, Foraker R, Wasserman J, Roth C, Mekhjian H, Lemeshow S, Embi P. Diagnosis-specific readmission risk prediction using electronic health data: a retrospective cohort study. BMC Med Inform Decis Mak. 2014 Aug 4;14:65. doi: 10.1186/1472-6947-14-65. PubMed PMID: 25091637; PubMed Central PMCID: PMC4136398.
Lopetegui M, Yen PY, Lai A, Jeffries J, Embi P, Payne P. Time motion studies in healthcare: what are we talking about?. J Biomed Inform. 2014 Jun;49:292-9. doi: 10.1016/j.jbi.2014.02.017. Epub 2014 Mar 7. Review. PubMed PMID: 24607863; PubMed Central PMCID: PMC4058370.
Roth C, Foraker RE, Payne PR, Embi PJ. Community-level determinants of obesity: harnessing the power of electronic health records for retrospective data analysis. BMC Med Inform Decis Mak. 2014 May 8;14:36. doi: 10.1186/1472-6947-14-36. PubMed PMID: 24886134; PubMed Central PMCID: PMC4024096.
Hripcsak G, Bloomrosen M, FlatelyBrennan P, Chute CG, Cimino J, Detmer DE, Edmunds M, Embi PJ, Goldstein MM, Hammond WE, Keenan GM, Labkoff S, Murphy S, Safran C, Speedie S, Strasberg H, Temple F, Wilcox AB. Health data use, stewardship, and governance: ongoing gaps and challenges: a report from AMIA's 2012 Health Policy Meeting. J Am Med Inform Assoc. 2014 Mar-Apr;21(2):204-11. doi: 10.1136/amiajnl-2013-002117. Epub 2013 Oct 29. PubMed PMID: 24169275; PubMed Central PMCID: PMC3932468.
Shivade C, Raghavan P, Fosler-Lussier E, Embi PJ, Elhadad N, Johnson SB, Lai AM. A review of approaches to identifying patient phenotype cohorts using electronic health records. J Am Med Inform Assoc. 2014 Mar-Apr;21(2):221-30. doi: 10.1136/amiajnl-2013-001935. Epub 2013 Nov 7. Review. PubMed PMID: 24201027; PubMed Central PMCID: PMC3932460.
Sweet K, Gordon ES, Sturm AC, Schmidlen TJ, Manickam K, Toland AE, Keller MA, Stack CB, García-España JF, Bellafante M, Tayal N, Embi P, Binkley P, Hershberger RE, Sadee W, Christman M, Marsh C. Design and implementation of a randomized controlled trial of genomic counseling for patients with chronic disease. J Pers Med. 2014 Jan 8;4(1):1-19. doi: 10.3390/jpm4010001. PubMed PMID: 24926413; PubMed Central PMCID: PMC4051230.
Bradford W, Hurdle JF, LaSalle B, Facelli JC. Development of a HIPAA-compliant environment for translational research data and analytics. J Am Med Inform Assoc. 2014 Jan-Feb;21(1):185-9. doi: 10.1136/amiajnl-2013-001769. Epub 2013 Aug 2. PubMed PMID: 23911553; PubMed Central PMCID: PMC3912719.
Lopetegui MA, Bai S, Yen PY, Lai A, Embi P, Payne PR. Inter-observer reliability assessments in time motion studies: the foundation for meaningful clinical workflow analysis. AMIA Annu Symp Proc. 2013;2013:889-96. eCollection 2013. Review. PubMed PMID: 24551381; PubMed Central PMCID: PMC3900222.
Hersh WR, Cimino J, Payne PR, Embi P, Logan J, Weiner M, Bernstam EV, Lehmann H, Hripcsak G, Hartzog T, Saltz J. Recommendations for the use of operational electronic health record data in comparative effectiveness research. EGEMS (Wash DC). 2013;1(1):1018. doi: 10.13063/2327-9214.1018. eCollection 2013. PubMed PMID: 25848563; PubMed Central PMCID: PMC4371471.
Otsuka SH, Tayal NH, Porter K, Embi PJ, Beatty SJ. Improving herpes zoster vaccination rates through use of a clinical pharmacist and a personal health record. Am J Med. 2013 Sep;126(9):832.e1-6. doi: 10.1016/j.amjmed.2013.02.018. Epub 2013 Jul 3. PubMed PMID: 23830534; PubMed Central PMCID: PMC3980553.
Hersh WR, Weiner MG, Embi PJ, Logan JR, Payne PR, Bernstam EV, Lehmann HP, Hripcsak G, Hartzog TH, Cimino JJ, Saltz JH. Caveats for the use of operational electronic health record data in comparative effectiveness research. Med Care. 2013 Aug;51(8 Suppl 3):S30-7. doi: 10.1097/MLR.0b013e31829b1dbd. PubMed PMID: 23774517; PubMed Central PMCID: PMC3748381.
Embi PJ, Hebert C, Gordillo G, Kelleher K, Payne PR. Knowledge management and informatics considerations for comparative effectiveness research: a case-driven exploration. Med Care. 2013 Aug;51(8 Suppl 3):S38-44. doi: 10.1097/MLR.0b013e31829b1de1. PubMed PMID: 23793050; PubMed Central PMCID: PMC3914140.
Weng C, Li Y, Berhe S, Boland MR, Gao J, Hruby GW, Steinman RC, Lopez-Jimenez C, Busacca L, Hripcsak G, Bakken S, Bigger JT. An Integrated Model for Patient Care and Clinical Trials (IMPACT) to support clinical research visit scheduling workflow for future learning health systems. J Biomed Inform. 2013 Aug;46(4):642-52. doi: 10.1016/j.jbi.2013.05.001. Epub 2013 May 16. PubMed PMID: 23684593; PubMed Central PMCID: PMC3716847.
Embi PJ, Payne PR. Evidence generating medicine: redefining the research-practice relationship to complete the evidence cycle. Med Care. 2013 Aug;51(8 Suppl 3):S87-91. doi: 10.1097/MLR.0b013e31829b1d66. PubMed PMID: 23793052.
Shuldiner AR, Relling MV, Peterson JF, Hicks JK, Freimuth RR, Sadee W, Pereira NL, Roden DM, Johnson JA, Klein TE, Shuldiner AR, Vesely M, Robinson SW, Ambulos N Jr, Stass SA, Kelemen MD, Brown LA, Pollin TI, Beitelshees AL, Zhao RY, Pakyz RE, Palmer K, Alestock T, O'Neill C, Maloney K, Branham A, Sewell D, Relling MV, Crews K, Hoffman J, Cross S, Haidar C, Baker D, Hicks JK, Bell G, Greeson F, Gaur A, Reiss U, Huettel A, Cheng C, Gajjar A, Pappo A, Howard S, Hudson M, Pui CH, Jeha S, Evans WE, Broeckel U, Altman RB, Gong L, Whirl-Carrillo M, Klein TE, Sadee W, Manickam K, Sweet KM, Embi PJ, Roden D, Peterson J, Denny J, Schildcrout J, Bowton E, Pulley J, Beller M, Mitchell J, Danciu I, Price L, Pereira NL, Weinshilboum R, Wang L, Johnson JA, Nelson D, Clare-Salzler M, Elsey A, Burkley B, Langaee T, Liu F, Nessl D, Dong HJ, Lesko L, Freimuth RR, Chute CG. The Pharmacogenomics Research Network Translational Pharmacogenetics Program: overcoming challenges of real-world implementation. Clin Pharmacol Ther. 2013 Aug;94(2):207-10. doi: 10.1038/clpt.2013.59. Epub 2013 Mar 19. PubMed PMID: 23588301; PubMed Central PMCID: PMC3720847.
Embi PJ, Weir C, Efthimiadis EN, Thielke SM, Hedeen AN, Hammond KW. Computerized provider documentation: findings and implications of a multisite study of clinicians and administrators. J Am Med Inform Assoc. 2013 Jul-Aug;20(4):718-26. doi: 10.1136/amiajnl-2012-000946. Epub 2013 Jan 25. PubMed PMID: 23355462; PubMed Central PMCID: PMC3721152.
Bauer-Mehren A, Lependu P, Iyer SV, Harpaz R, Leeper NJ, Shah NH. Network analysis of unstructured EHR data for clinical research. AMIA Jt Summits Transl Sci Proc. 2013;2013:14-8. eCollection 2013. PubMed PMID: 24303229; PubMed Central PMCID: PMC3845760.
Khan Y, Roth C, Payne P, Patterson E, Leonard A, Elder N, Eckman M, Embi PJ. EHR-based Clinical Trial Alert Effects on Recruitment to a Neurology Trial across Institutions: Interim Analysis of a Randomized Controlled Study. AMIA Jt Summits Transl Sci Proc. 2013;2013:117. eCollection 2013. PubMed PMID: 24303248.
Roth C, Khan YM, Foraker RE, Embi PJ. Augmenting EHR-Derived Clinical Data with Geographic-Level Public Information to Develop Research Hypotheses for Population Obesity Rates. AMIA Jt Summits Transl Sci Proc. 2013;2013:226. eCollection 2013. PubMed PMID: 24303269.
Embi PJ, Tachinardi U, Lussier Y, Starren J, Silverstein J. Integrating Governance of Research Informatics and Health Care IT Across an Enterprise: Experiences from the Trenches. AMIA Jt Summits Transl Sci Proc. 2013;2013:60-2. eCollection 2013. PubMed PMID: 24303236; PubMed Central PMCID: PMC3845750.
Goodman KW, Adams S, Berner ES, Embi PJ, Hsiung R, Hurdle J, Jones DA, Lehmann CU, Maulden S, Petersen C, Terrazas E, Winkelstein P. AMIA's code of professional and ethical conduct. J Am Med Inform Assoc. 2013 Jan 1;20(1):141-3. doi: 10.1136/amiajnl-2012-001035. Epub 2012 Jun 25. PubMed PMID: 22733977; PubMed Central PMCID: PMC3555329.
Embi PJ. Clinical research informatics: survey of recent advances and trends in a maturing field. Yearb Med Inform. 2013;8:178-84. PubMed PMID: 23974569.
Roth C, Shivade CP, Foraker RE, Embi PJ. Integrating population- and patient-level data for secondary use of electronic health records to study overweight and obesity. Stud Health Technol Inform. 2013;192:1100. PubMed PMID: 23920874.
Embi A, Scherlag BJ, Embi PJ, Menes M, Po SS. Targeted cellular ionic calcium chelation by oxalates: Implications for the treatment of tumor cells. Cancer Cell Int. 2012 Dec 8;12(1):51. doi: 10.1186/1475-2867-12-51. PubMed PMID: 23216811; PubMed Central PMCID: PMC3541088.
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