My Bibliography

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O'Malley JP, Soltys PA, Portman OW. Interaction of free cholesterol and apoproteins of low and high density lipoproteins with isolated rabbit hepatocytes. J Lipid Res. 1981 Nov;22(8):1214-24. PubMed PMID: 7320632.

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Soltys PA, Portman OW, O'Malley JP. Binding properties of high-density lipoprotein subfractions and low-density lipoproteins to rabbit hepatocytes. Biochim Biophys Acta. 1982 Nov 12;713(2):300-14. doi: 10.1016/0005-2760(82)90248-x. PubMed PMID: 6295496.

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Portman OW, O'Malley JP, Alexander M. Metabolism of native and acetylated low density lipoproteins in squirrel monkeys with emphasis on aortas with varying severities of atherosclerosis. Atherosclerosis. 1987 Aug;66(3):227-35. doi: 10.1016/0021-9150(87)90066-9. PubMed PMID: 3632761.

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O'Malley JP, Illingworth DR. The influence of apolipoprotein E phenotype on the response to lovastatin therapy in patients with heterozygous familial hypercholesterolemia. Metabolism. 1990 Feb;39(2):150-4. doi: 10.1016/0026-0495(90)90068-n. PubMed PMID: 2299987.

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Illingworth DR, O'Malley JP. The hypolipidemic effects of lovastatin and clofibrate alone and in combination in patients with type III hyperlipoproteinemia. Metabolism. 1990 Apr;39(4):403-9. doi: 10.1016/0026-0495(90)90256-c. PubMed PMID: 2182974.

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O'Malley JP, Maslen CL, Illingworth DR. Angiotensin-converting enzyme DD genotype and cardiovascular disease in heterozygous familial hypercholesterolemia. Circulation. 1998 May 12;97(18):1780-3. doi: 10.1161/01.cir.97.18.1780. PubMed PMID: 9603531.

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O'Malley JP, Maslen CL, Illingworth DR. Angiotensin-converting enzyme and cardiovascular disease risk. Curr Opin Lipidol. 1999 Oct;10(5):407-15. doi: 10.1097/00041433-199910000-00005. Review. PubMed PMID: 10554703.

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Roberts SS, Mori M, Pattee P, Lapidus J, Mathews R, O'Malley JP, Hsieh YC, Turner MA, Wang Z, Tian Q, Rodland MJ, Reynolds CP, Seeger RC, Nagalla SR. GABAergic system gene expression predicts clinical outcome in patients with neuroblastoma. J Clin Oncol. 2004 Oct 15;22(20):4127-34. doi: 10.1200/JCO.2004.02.032. PubMed PMID: 15483022.

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Bammler T, Beyer RP, Bhattacharya S, Boorman GA, Boyles A, Bradford BU, Bumgarner RE, Bushel PR, Chaturvedi K, Choi D, Cunningham ML, Deng S, Dressman HK, Fannin RD, Farin FM, Freedman JH, Fry RC, Harper A, Humble MC, Hurban P, Kavanagh TJ, Kaufmann WK, Kerr KF, Jing L, Lapidus JA, Lasarev MR, Li J, Li YJ, Lobenhofer EK, Lu X, Malek RL, Milton S, Nagalla SR, O'malley JP, Palmer VS, Pattee P, Paules RS, Perou CM, Phillips K, Qin LX, Qiu Y, Quigley SD, Rodland M, Rusyn I, Samson LD, Schwartz DA, Shi Y, Shin JL, Sieber SO, Slifer S, Speer MC, Spencer PS, Sproles DI, Swenberg JA, Suk WA, Sullivan RC, Tian R, Tennant RW, Todd SA, Tucker CJ, Van Houten B, Weis BK, Xuan S, Zarbl H. Standardizing global gene expression analysis between laboratories and across platforms. Nat Methods. 2005 May;2(5):351-6. doi: 10.1038/nmeth754. Epub 2005 Apr 21. PubMed PMID: 15846362.

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Kisby GE, Standley M, Lu X, O'Malley J, Lin B, Muniz J, Luo NL, Pattee P, Back SA, Nagalla SR. Molecular networks perturbed in a developmental animal model of brain injury. Neurobiol Dis. 2005 Jun-Jul;19(1-2):108-18. doi: 10.1016/j.nbd.2004.11.014. PubMed PMID: 15837566.

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Back SA, Luo NL, Mallinson RA, O'Malley JP, Wallen LD, Frei B, Morrow JD, Petito CK, Roberts CT Jr, Murdoch GH, Montine TJ. Selective vulnerability of preterm white matter to oxidative damage defined by F2-isoprostanes. Ann Neurol. 2005 Jul;58(1):108-20. doi: 10.1002/ana.20530. PubMed PMID: 15984031.

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Nemer McCoy R, Blasco PA, Russman BS, O'Malley JP. Validation of a care and comfort hypertonicity questionnaire. Dev Med Child Neurol. 2006 Mar;48(3):181-7. doi: 10.1017/S0012162206000405. PubMed PMID: 16483393.

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Eisner A, O'Malley JP, Incognito LJ, Toomey MD, Samples JR. Small optic cup sizes among women using tamoxifen: assessment with scanning laser ophthalmoscopy. Curr Eye Res. 2006 Apr;31(4):367-79. doi: 10.1080/02713680600602547. PubMed PMID: 16603470.

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Wertheim MS, Mathers WD, Lim L, Watkins AS, Mackensen F, O'Malley JP, Rosenbaum JT. Non-invasive detection of multinucleated giant cells in the conjunctiva of patients with sarcoidosis by in-vivo confocal microscopy. Ocul Immunol Inflamm. 2006 Aug;14(4):203-6. doi: 10.1080/09273940600826471. PubMed PMID: 16911981.

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Kisby GE, Olivas A, Standley M, Lu X, Pattee P, O'Malley J, Li X, Muniz J, Nagalla SR. Genotoxicants target distinct molecular networks in neonatal neurons. Environ Health Perspect. 2006 Nov;114(11):1703-12. doi: 10.1289/ehp.9073. PubMed PMID: 17107856; PubMed Central PMCID: PMC1665395.

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Eisner A, Toomey MD, Incognito LJ, O'malley JP, Samples JR. Contrasting blue-on-yellow with white-on-white visual fields: Roles of visual adaptation for healthy peri- or postmenopausal women younger than 70 years of age. Invest Ophthalmol Vis Sci. 2006 Dec;47(12):5605-14. doi: 10.1167/iovs.05-1612. PubMed PMID: 17122155.

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McEvoy C, Schilling D, Spitale P, Peters D, O'Malley J, Durand M. Decreased respiratory compliance in infants less than or equal to 32 weeks' gestation, delivered more than 7 days after antenatal steroid therapy. Pediatrics. 2008 May;121(5):e1032-8. doi: 10.1542/peds.2007-2608. PubMed PMID: 18450845.

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Knafl GJ, Bova CA, Fennie KP, O'Malley JP, Dieckhaus KD, Williams AB. An analysis of electronically monitored adherence to antiretroviral medications. AIDS Behav. 2010 Aug;14(4):755-68. doi: 10.1007/s10461-008-9512-z. Epub 2008 Dec 24. PubMed PMID: 19107587; PubMed Central PMCID: PMC3155184.

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Knafl GJ, Dixon JK, O'Malley JP, Grey M, Deatrick JA, Gallo AM, Knafl KA. Analysis of cross-sectional univariate measurements for family dyads using linear mixed modeling. J Fam Nurs. 2009 May;15(2):130-51. doi: 10.1177/1074840709331641. Epub 2009 Mar 23. PubMed PMID: 19307316; PubMed Central PMCID: PMC2848874.

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Knafl K, Deatrick JA, Gallo A, Dixon J, Grey M, Knafl G, O'Malley J. Assessment of the psychometric properties of the Family Management Measure. J Pediatr Psychol. 2011 Jun;36(5):494-505. doi: 10.1093/jpepsy/jsp034. Epub 2009 May 18. PubMed PMID: 19451173; PubMed Central PMCID: PMC3131701.

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Flory GS, O'Malley J, Grant KA, Park B, Kroenke CD. Quantification of ethanol methyl (1)H magnetic resonance signal intensity following intravenous ethanol administration in primate brain. Methods. 2010 Mar;50(3):189-98. doi: 10.1016/j.ymeth.2009.12.004. Epub 2009 Dec 14. PubMed PMID: 20018244; PubMed Central PMCID: PMC2828522.

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Saultz JW, O'Neill P, Gill JM, Biagioli FE, Blanchard S, O'Malley JP, Brown D, Rogers JC, Carney PA. Medical student exposure to components of the patient-centered medical home during required ambulatory clerkship rotations: implications for education. Acad Med. 2010 Jun;85(6):965-73. doi: 10.1097/ACM.0b013e3181dbfa68. PubMed PMID: 20505395; PubMed Central PMCID: PMC2885968.

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Hobbs TR, O'Malley JP, Khouangsathiene S, Dubay CJ. Comparison of lactate, base excess, bicarbonate, and pH as predictors of mortality after severe trauma in rhesus macaques (Macaca mulatta). Comp Med. 2010 Jun;60(3):233-9. PubMed PMID: 20579439; PubMed Central PMCID: PMC2890399.

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Shannon J, O'Malley J, Mori M, Garzotto M, Palma AJ, King IB. Erythrocyte fatty acids and prostate cancer risk: a comparison of methods. Prostaglandins Leukot Essent Fatty Acids. 2010 Sep;83(3):161-9. doi: 10.1016/j.plefa.2010.06.003. Epub 2010 Jul 14. PubMed PMID: 20630734; PubMed Central PMCID: PMC2939373.

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Knafl GJ, Dixon JK, O'Malley JP, Grey M, Deatrick JA, Gallo A, Knafl KA. Scale development based on likelihood cross-validation. Stat Methods Med Res. 2012 Dec;21(6):599-619. doi: 10.1177/0962280210391444. Epub 2010 Dec 9. PubMed PMID: 21148193; PubMed Central PMCID: PMC3767425.

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Spencer D, Gwinn R, Salinsky M, O'Malley JP. Laterality and temporal distribution of seizures in patients with bitemporal independent seizures during a trial of responsive neurostimulation. Epilepsy Res. 2011 Feb;93(2-3):221-5. doi: 10.1016/j.eplepsyres.2010.12.010. Epub 2011 Jan 21. PubMed PMID: 21256715.

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Humphrey LL, Shannon J, Partin MR, O'Malley J, Chen Z, Helfand M. Improving the follow-up of positive hemoccult screening tests: an electronic intervention. J Gen Intern Med. 2011 Jul;26(7):691-7. doi: 10.1007/s11606-011-1639-3. Epub 2011 Feb 15. PubMed PMID: 21327529; PubMed Central PMCID: PMC3138585.

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Malherbe DC, Doria-Rose NA, Misher L, Beckett T, Puryear WB, Schuman JT, Kraft Z, O'Malley J, Mori M, Srivastava I, Barnett S, Stamatatos L, Haigwood NL. Sequential immunization with a subtype B HIV-1 envelope quasispecies partially mimics the in vivo development of neutralizing antibodies. J Virol. 2011 Jun;85(11):5262-74. doi: 10.1128/JVI.02419-10. Epub 2011 Mar 23. PubMed PMID: 21430056; PubMed Central PMCID: PMC3094990.

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Lu MW, Duckart JP, O'Malley JP, Dobscha SK. Correlates of utilization of PTSD specialty treatment among recently diagnosed veterans at the VA. Psychiatr Serv. 2011 Aug;62(8):943-9. doi: 10.1176/ps.62.8.pss6208_0943. PubMed PMID: 21807835.

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Slatore CG, Goy ER, Oʼhearn DJ, Boudreau EA, OʼMalley JP, Peters D, Ganzini L. Sleep quality and its association with delirium among veterans enrolled in hospice. Am J Geriatr Psychiatry. 2012 Apr;20(4):317-26. doi: 10.1097/JGP.0b013e3182487680. PubMed PMID: 22367162; PubMed Central PMCID: PMC3440244.

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Carney PA, O'Malley J, Buckley DI, Mori M, Lieberman DA, Fagnan LJ, Wallace J, Liu B, Morris C. Influence of health insurance coverage on breast, cervical, and colorectal cancer screening in rural primary care settings. Cancer. 2012 Dec 15;118(24):6217-25. doi: 10.1002/cncr.27635. Epub 2012 May 30. PubMed PMID: 22648383; PubMed Central PMCID: PMC3864695.

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Gorman PN, O'Malley JP, Fagnan LJ. The relationship of self-report of quality to practice size and health information technology. J Am Board Fam Med. 2012 Sep-Oct;25(5):614-24. doi: 10.3122/jabfm.2012.05.120063. PubMed PMID: 22956697.

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Hunsberger M, O'Malley J, Block T, Norris JC. Relative validation of Block Kids Food Screener for dietary assessment in children and adolescents. Matern Child Nutr. 2015 Apr;11(2):260-70. doi: 10.1111/j.1740-8709.2012.00446.x. Epub 2012 Sep 24. PubMed PMID: 23006452; PubMed Central PMCID: PMC6860172.

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Rao MK, Morris CD, O'Malley JP, Davis MM, Mori M, Anderson S. Documentation and management of CKD in rural primary care. Clin J Am Soc Nephrol. 2013 May;8(5):739-48. doi: 10.2215/CJN.02410312. Epub 2013 Jan 31. PubMed PMID: 23371962; PubMed Central PMCID: PMC3641611.

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Carney PA, O'Malley JP, Gough A, Buckley DI, Wallace J, Fagnan LJ, Morris C, Mori M, Heintzman JD, Lieberman D. Association between documented family history of cancer and screening for breast and colorectal cancer. Prev Med. 2013 Nov;57(5):679-84. doi: 10.1016/j.ypmed.2013.08.031. Epub 2013 Sep 9. PubMed PMID: 24029558; PubMed Central PMCID: PMC4041693.

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Marshall LM, Carlson EJ, O'Malley J, Snyder CK, Charbonneau NL, Hayflick SJ, Coselli JS, Lemaire SA, Sakai LY. Thoracic aortic aneurysm frequency and dissection are associated with fibrillin-1 fragment concentrations in circulation. Circ Res. 2013 Oct 25;113(10):1159-68. doi: 10.1161/CIRCRESAHA.113.301498. Epub 2013 Sep 13. PubMed PMID: 24036495.

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Bailey SR, O'Malley JP, Gold R, Heintzman J, Likumahuwa S, DeVoe JE. Diabetes care quality is highly correlated with patient panel characteristics. J Am Board Fam Med. 2013 Nov-Dec;26(6):669-79. doi: 10.3122/jabfm.2013.06.130018. PubMed PMID: 24204063; PubMed Central PMCID: PMC3922763.

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Heintzman J, Bailey SR, Hoopes MJ, Le T, Gold R, O'Malley JP, Cowburn S, Marino M, Krist A, DeVoe JE. Agreement of Medicaid claims and electronic health records for assessing preventive care quality among adults. J Am Med Inform Assoc. 2014 Jul-Aug;21(4):720-4. doi: 10.1136/amiajnl-2013-002333. Epub 2014 Feb 7. PubMed PMID: 24508767; PubMed Central PMCID: PMC4078280.

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Hunsberger M, McGinnis P, Smith J, Beamer BA, O'Malley J. Elementary school children's recess schedule and dietary intake at lunch: a community-based participatory research partnership pilot study. BMC Public Health. 2014 Feb 12;14:156. doi: 10.1186/1471-2458-14-156. PubMed PMID: 24520852; PubMed Central PMCID: PMC3937036.

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Heintzman J, Marino M, Hoopes M, Bailey S, Gold R, Crawford C, Cowburn S, O'Malley J, Nelson C, DeVoe JE. Using electronic health record data to evaluate preventive service utilization among uninsured safety net patients. Prev Med. 2014 Oct;67:306-10. doi: 10.1016/j.ypmed.2014.08.006. Epub 2014 Aug 11. PubMed PMID: 25124279; PubMed Central PMCID: PMC4363138.

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Liu BY, O'Malley J, Mori M, Fagnan LJ, Lieberman D, Morris CD, Buckley DI, Heintzman JD, Carney PA. The association of type and number of chronic diseases with breast, cervical, and colorectal cancer screening. J Am Board Fam Med. 2014 Sep-Oct;27(5):669-81. doi: 10.3122/jabfm.2014.05.140005. PubMed PMID: 25201936; PubMed Central PMCID: PMC4273642.

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Gold R, Bailey SR, OʼMalley JP, Hoopes MJ, Cowburn S, Marino M, Heintzman J, Nelson C, Fortmann SP, DeVoe JE. Estimating demand for care after a medicaid expansion: lessons from Oregon. J Ambul Care Manage. 2014 Oct-Dec;37(4):282-92. doi: 10.1097/JAC.0000000000000023. PubMed PMID: 24608921; PubMed Central PMCID: PMC4172441.

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Angier H, Gold R, Crawford C, P O'Malley J, J Tillotson C, Marino M, DeVoe JE. Linkage methods for connecting children with parents in electronic health record and state public health insurance data. Matern Child Health J. 2014 Nov;18(9):2025-33. doi: 10.1007/s10995-014-1453-8. PubMed PMID: 24562505; PubMed Central PMCID: PMC4926760.

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Bailey SR, O'Malley JP, Gold R, Heintzman J, Marino M, DeVoe JE. Receipt of diabetes preventive services differs by insurance status at visit. Am J Prev Med. 2015 Feb;48(2):229-233. doi: 10.1016/j.amepre.2014.08.035. Epub 2014 Nov 6. PubMed PMID: 25442228; PubMed Central PMCID: PMC4301980.

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DeVoe JE, Marino M, Angier H, O'Malley JP, Crawford C, Nelson C, Tillotson CJ, Bailey SR, Gallia C, Gold R. Effect of expanding medicaid for parents on children's health insurance coverage: lessons from the Oregon experiment. JAMA Pediatr. 2015 Jan;169(1):e143145. doi: 10.1001/jamapediatrics.2014.3145. Epub 2015 Jan 5. PubMed PMID: 25561041; PubMed Central PMCID: PMC4918752.

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Hunsberger M, McGinnis P, Smith J, Beamer BA, O'Malley J. Calorie labeling in a rural middle school influences food selection: findings from community-based participatory research. J Obes. 2015;2015:531690. doi: 10.1155/2015/531690. Epub 2015 Mar 22. PubMed PMID: 25874121; PubMed Central PMCID: PMC4385590.

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Heintzman J, Marino M, Hoopes M, Bailey SR, Gold R, O'Malley J, Angier H, Nelson C, Cottrell E, Devoe J. Supporting health insurance expansion: do electronic health records have valid insurance verification and enrollment data?. J Am Med Inform Assoc. 2015 Jul;22(4):909-13. doi: 10.1093/jamia/ocv033. Epub 2015 Apr 17. PubMed PMID: 25888586; PubMed Central PMCID: PMC5009899.

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DeVoe JE, Marino M, Gold R, Hoopes MJ, Cowburn S, O'Malley JP, Heintzman J, Gallia C, McConnell KJ, Nelson CA, Huguet N, Bailey SR. Community Health Center Use After Oregon's Randomized Medicaid Experiment. Ann Fam Med. 2015 Jul-Aug;13(4):312-20. doi: 10.1370/afm.1812. PubMed PMID: 26195674; PubMed Central PMCID: PMC4508170.

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DeVoe JE, Crawford C, Angier H, O'Malley J, Gallia C, Marino M, Gold R. The Association Between Medicaid Coverage for Children and Parents Persists: 2002-2010. Matern Child Health J. 2015 Aug;19(8):1766-74. doi: 10.1007/s10995-015-1690-5. PubMed PMID: 25874876; PubMed Central PMCID: PMC4864606.

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Angier H, Marino M, Sumic A, O'Malley J, Likumahuwa-Ackman S, Hoopes M, Nelson C, Gold R, Cohen D, Dickerson K, DeVoe JE. Innovative methods for parents and clinics to create tools for kids' care (IMPACCT Kids' Care) study protocol. Contemp Clin Trials. 2015 Sep;44:159-163. doi: 10.1016/j.cct.2015.08.010. Epub 2015 Aug 18. PubMed PMID: 26291916; PubMed Central PMCID: PMC4757508.