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Liman Zhang's Bibliography

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Ye K, Jia R, Lin J, Ju M, Peng J, Xu A, Zhang L. Structural organization of box C/D RNA-guided RNA methyltransferase. Proc Natl Acad Sci U S A. 2009 Aug 18;106(33):13808-13. doi: 10.1073/pnas.0905128106. Epub 2009 Aug 5. PubMed PMID: 19666563; PubMed Central PMCID: PMC2728976.

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Lin J, Lai S, Jia R, Xu A, Zhang L, Lu J, Ye K. Structural basis for site-specific ribose methylation by box C/D RNA protein complexes. Nature. 2011 Jan 27;469(7331):559-63. doi: 10.1038/nature09688. PubMed PMID: 21270896.

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Lin J, Zhang L, Lai S, Ye K. Structure and molecular evolution of CDGSH iron-sulfur domains. PLoS One. 2011;6(9):e24790. doi: 10.1371/journal.pone.0024790. Epub 2011 Sep 16. PubMed PMID: 21949752; PubMed Central PMCID: PMC3174974.

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Zhang L, Lin J, Ye K. Structural and functional analysis of the U3 snoRNA binding protein Rrp9. RNA. 2013 May;19(5):701-11. doi: 10.1261/rna.037580.112. Epub 2013 Mar 18. PubMed PMID: 23509373; PubMed Central PMCID: PMC3677284.

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Hauenstein AV, Zhang L, Wu H. The hierarchical structural architecture of inflammasomes, supramolecular inflammatory machines. Curr Opin Struct Biol. 2015 Apr;31:75-83. doi: 10.1016/j.sbi.2015.03.014. Epub 2015 Apr 13. Review. PubMed PMID: 25881155; PubMed Central PMCID: PMC4476925.

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Zhang L, Chen S, Ruan J, Wu J, Tong AB, Yin Q, Li Y, David L, Lu A, Wang WL, Marks C, Ouyang Q, Zhang X, Mao Y, Wu H. Cryo-EM structure of the activated NAIP2-NLRC4 inflammasome reveals nucleated polymerization. Science. 2015 Oct 23;350(6259):404-9. doi: 10.1126/science.aac5789. Epub 2015 Oct 8. PubMed PMID: 26449474; PubMed Central PMCID: PMC4640189.

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Zhang L, Wu C, Cai G, Chen S, Ye K. Stepwise and dynamic assembly of the earliest precursors of small ribosomal subunits in yeast. Genes Dev. 2016 Mar 15;30(6):718-32. doi: 10.1101/gad.274688.115. PubMed PMID: 26980190; PubMed Central PMCID: PMC4803056.

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Yang X, Yang F, Wang W, Lin G, Hu Z, Han Z, Qi Y, Zhang L, Wang J, Sui SF, Chai J. Structural basis for specific flagellin recognition by the NLR protein NAIP5. Cell Res. 2018 Jan;28(1):35-47. doi: 10.1038/cr.2017.148. Epub 2017 Nov 28. PubMed PMID: 29182158; PubMed Central PMCID: PMC5752844.

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Zhang L, Wu H. Bad germs are trapped. Cell Res. 2018 Feb;28(2):141-142. doi: 10.1038/cr.2018.5. Epub 2018 Jan 9. PubMed PMID: 29313529; PubMed Central PMCID: PMC5799821.

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Chen J, Zhang L, Ye K. Functional regions in the 5' external transcribed spacer of yeast pre-rRNA. RNA. 2020 Jul;26(7):866-877. doi: 10.1261/rna.074807.120. Epub 2020 Mar 25. PubMed PMID: 32213618; PubMed Central PMCID: PMC7297118.

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Nash G, Paidimuddala B, Zhang L. Structural aspects of the MHC expression control system. Biophys Chem. 2022 May;284:106781. doi: 10.1016/j.bpc.2022.106781. Epub 2022 Feb 15. Review. PubMed PMID: 35228036; PubMed Central PMCID: PMC8941990.

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Cao J, Nash G, Zhang L. Structural mechanisms of inflammasome regulation revealed by cryo-EM studies. Curr Opin Struct Biol. 2022 Aug;75:102390. doi: 10.1016/j.sbi.2022.102390. Epub 2022 May 26. Review. PubMed PMID: 35636002; PubMed Central PMCID: PMC9597862.

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Paidimuddala B, Cao J, Nash G, Xie Q, Wu H, Zhang L. Mechanism of NAIP-NLRC4 inflammasome activation revealed by cryo-EM structure of unliganded NAIP5. Nat Struct Mol Biol. 2023 Feb;30(2):159-166. doi: 10.1038/s41594-022-00889-2. Epub 2023 Jan 5. PubMed PMID: 36604500; PubMed Central PMCID: PMC10576962.

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Paidimuddala B, Cao J, Zhang L. Structural basis for flagellin-induced NAIP5 activation. Sci Adv. 2023 Dec 8;9(49):eadi8539. doi: 10.1126/sciadv.adi8539. Epub 2023 Dec 6. PubMed PMID: 38055825; PubMed Central PMCID: PMC10699770.

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Shen C, Pandey A, Enosi Tuipulotu D, Mathur A, Liu L, Yang H, Adikari NK, Ngo C, Jing W, Feng S, Hao Y, Zhao A, Kirkby M, Kurera M, Zhang J, Venkataraman S, Liu C, Song R, Wong JJ, Schumann U, Natoli R, Wen J, Zhang L, Kaakoush NO, Man SM. Inflammasome protein scaffolds the DNA damage complex during tumor development. Nat Immunol. 2024 Nov;25(11):2085-2096. doi: 10.1038/s41590-024-01988-6. Epub 2024 Oct 14. PubMed PMID: 39402152.

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