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    hopM1 type III secretion system effector HopM1 [ Pseudomonas syringae pv. tomato str. DC3000 ]

    Gene ID: 1183011, updated on 31-Jan-2024

    Summary

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    Gene symbol
    hopM1
    Gene description
    type III secretion system effector HopM1
    Locus tag
    PSPTO_RS07225
    Gene type
    protein coding
    Organism
    Pseudomonas syringae pv. tomato str. DC3000 (strain: DC3000, pathovar: tomato, type-material: reference strain of Pseudomonas syringae group genomosp. 3)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
    Old locus tag
    PSPTO1375; PSPTO_1375
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    Genomic context

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    Sequence:
    NC_004578.1 (1511461..1513599)

    NC_004578.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene pectate lyase Neighboring gene CesT family type III secretion system chaperone Neighboring gene type III secretion system chaperone Neighboring gene type III secretion system effector AvrE1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004578.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Basal resistance against bacteria in Nicotiana benthamiana leaves is accompanied by reduced vascular staining and suppressed by multiple Pseudomonas syringae type III secretion system effector proteins. Oh HS, et al. Plant J, 2005 Oct. PMID 16212612
    2. A family of conserved bacterial effectors inhibits salicylic acid-mediated basal immunity and promotes disease necrosis in plants. DebRoy S, et al. Proc Natl Acad Sci U S A, 2004 Jun 29. PMID 15210989, Free PMC Article
    3. Pseudomonas syringae pv. tomato DC3000 HopPtoM (CEL ORF3) is important for lesion formation but not growth in tomato and is secreted and translocated by the Hrp type III secretion system in a chaperone-dependent manner. Badel JL, et al. Mol Microbiol, 2003 Sep. PMID 12940984
    4. A bacterial virulence protein suppresses host innate immunity to cause plant disease. Nomura K, et al. Science, 2006 Jul 14. PMID 16840699
    5. A Pseudomonas syringae pv. tomato avrE1/hopM1 mutant is severely reduced in growth and lesion formation in tomato. Badel JL, et al. Mol Plant Microbe Interact, 2006 Feb. PMID 16529372

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    type III secretion system effector HopM1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004578.1 Reference assembly

      Range
      1511461..1513599
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_005763919.1 MULTISPECIES: type III secretion system effector HopM1 [Pseudomonas syringae group]

      See identical proteins and their annotated locations for WP_005763919.1

      UniProtKB/Swiss-Prot
      Q887D0, Q9JP36
      UniProtKB/TrEMBL
      A0A0N0G6H3, A0A3M3BUY9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q887D0.1

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