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    LOC107986735 uncharacterized LOC107986735 [ Homo sapiens (human) ]

    Gene ID: 107986735, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC107986735
    Gene description
    uncharacterized LOC107986735
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    Location:
    7p14.1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (42866329..42869299)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (43024466..43027437)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:42700646-42701845 Neighboring gene long intergenic non-protein coding RNA 1448 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:42726154-42726702 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr7:42789414-42790613 Neighboring gene NANOG hESC enhancer GRCh37_chr7:42845047-42845574 Neighboring gene t-complex 1 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18120 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:42910171-42910751 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:42915433-42916364 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:42917594-42918115 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:42923371-42924173 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:42927975-42928518 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:42950498-42951195 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:42951196-42951892 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25904 Neighboring gene serine-threonine kinase receptor-associated protein-like Neighboring gene chromosome 7 open reading frame 25 Neighboring gene proteasome 20S subunit alpha 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      42866329..42869299
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001745013.2 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      43024466..43027437
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007078104.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases