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    RNU6-172P RNA, U6 small nuclear 172, pseudogene [ Homo sapiens (human) ]

    Gene ID: 106479642, updated on 10-Oct-2023

    Summary

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    Official Symbol
    RNU6-172Pprovided by HGNC
    Official Full Name
    RNA, U6 small nuclear 172, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:47135
    See related
    Ensembl:ENSG00000222932 AllianceGenome:HGNC:47135
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See RNU6-172P in Genome Data Viewer
    Location:
    12q23.2
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (101796410..101796502, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (101757640..101757732, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (102190188..102190280, complement)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene N-acetylglucosamine-1-phosphate transferase subunits alpha and beta Neighboring gene RNA, 5S ribosomal pseudogene 368 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:102181608-102181804 Neighboring gene small nucleolar RNA U13 Neighboring gene Sharpr-MPRA regulatory region 5955 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4771 Neighboring gene RNA, 5S ribosomal pseudogene 369 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:102248561-102249060 Neighboring gene CRISPRi-validated cis-regulatory element chr12.3153 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6867 Neighboring gene RNA, U6 small nuclear 1183, pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_045322.1 

      Range
      101..193
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      101796410..101796502 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      101757640..101757732 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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