Skip to main content

NCBI SARS-CoV-2 Resources

3D image of a coronavirus

Submit SARS-CoV-2 Sequences

Add assembled & raw read data to the growing public archive

Submit Now

SARS-CoV-2 Literature

Articles referencing SARS-CoV-2 and COVID-19 in PubMed

Free full-text content in PubMed Central (PMC), including preprints, from the Public Health Emergency COVID-19 Initiative, suitable for text mining and secondary analysis

LitCovid: Comprehensive curated literature collection regarding the 2019 novel Coronavirus

Full-text COVID-19 guidelines and reviews in Bookshelf

SARS-CoV-2 Sequence Resources

Genome Reference Sequence (NC_045512)

NCBI RefSeq SARS-CoV-2 genome annotation

NCBI RefSeq SARS-CoV-2 genome sequence record

NCBI RefSeq SARS-CoV-2 genome graphical display

NCBI Gene SARS-CoV-2 curated gene records

Explore the Data

Search a BLAST database of Betacoronavirus nucleotide sequences

Search, retrieve, and analyze sequences and other content in the NCBI Virus SARS-CoV-2 Data Hub Interactive Dashboard

Delve deeper into geotemporal and mutation data on variants and lineages via our interactive SARS-CoV-2 Variants Overview dashboard

Download viral genome and protein sequences, annotation, and a data report from NCBI Datasets

Get the latest list of SARS-CoV-2 nucleotide sequences. You can query these IDs in GenBank

SARS-CoV-2 SRA dataset on the Registry of Open Data on AWS (Amazon Web Services)

SARS-CoV-2 next-generation sequencing runs in SRA

Coronaviridae family-containing SRA runs

SARS-CoV-2 protein structures, domains, and sequences available through NCBI Structure

SARS-CoV-2 related compounds, substances, pathways, bioassays, and more in PubChem

Genome expression studies related to SARS-CoV-2 in GEO

COVID-19 Clinical Resources

Clinical studies related to COVID-19 registered in

Tool for specialized clinical topic searches of COVID-19 articles in PubMed

Studies in dbGaP focused on COVID-19

COVID-19 tests registered in the Genetic Testing Registry (GTR)

Compounds used in COVID-19 related studies registered in

COVID-19 related human gene annotation available through NCBI Gene

Other Websites