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COG definitions	Organims	Proteins	Median Protein Length	Genes
364	2,296	526,291	243.0	361

Organism	Protein	COG	Cat	Annotation
2285	4601	COG0008	J	Glutamyl- or glutaminyl-tRNA synthetase
2242	3252	COG0009	J	tRNA A37 threonylcarbamoyladenosine synthetase subunit TsaC/SUA5/YrdC
2264	2359	COG0012	J	Ribosome-binding ATPase YchF, GTP1/OBG family
2268	2542	COG0013	J	Alanyl-tRNA synthetase
2274	2321	COG0016	J	Phenylalanyl-tRNA synthetase alpha subunit
1294	1502	COG0017	J	Aspartyl/asparaginyl-tRNA synthetase
2269	2431	COG0018	J	Arginyl-tRNA synthetase
782	828	COG0023	J	Translation initiation factor 1 (eIF-1/SUI1)
2274	3226	COG0024	J	Methionine aminopeptidase
2251	2589	COG0030	J	rRNA adenine N6-methylase, includes 16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM and 23S rRNA A2058 N6-methylase ErmO/TlrD (may also have DNA glycosylase/AP lyase activity)
2249	3517	COG0037	J	tRNA-C32 2-thiocytidine or tRNA(Ile)-C34 C2-lysylcytidine synthase TtcA/TilS/MesJ
2086	3312	COG0042	J	tRNA-dihydrouridine synthase
2221	2148	COG0048	J	Ribosomal protein S12
2280	2269	COG0049	J	Ribosomal protein S7
2079	2400	COG0050	J	Translation elongation factor EF-Tu, a GTPase
2138	2031	COG0051	J	Ribosomal protein S10
2248	2246	COG0052	J	Ribosomal protein S2
2258	2313	COG0060	J	Isoleucyl-tRNA synthetase
1884	1929	COG0064	J	Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit
2254	2264	COG0072	J	Phenylalanyl-tRNA synthetase beta subunit
2258	4229	COG0073	J	tRNA-binding EMAP/Myf domain
2279	2281	COG0080	J	Ribosomal protein L11
2267	2265	COG0081	J	Ribosomal protein L1
2270	2265	COG0087	J	Ribosomal protein L3
2280	2269	COG0088	J	Ribosomal protein L4
2273	2259	COG0089	J	Ribosomal protein L23
2277	2274	COG0090	J	Ribosomal protein L2
2256	2229	COG0091	J	Ribosomal protein L22
2258	2236	COG0092	J	Ribosomal protein S3
2245	2186	COG0093	J	Ribosomal protein L14
2284	2276	COG0094	J	Ribosomal protein L5
2285	2276	COG0096	J	Ribosomal protein S8
2283	2279	COG0097	J	Ribosomal protein L6P/L9E
2263	2249	COG0098	J	Ribosomal protein S5
2269	2282	COG0099	J	Ribosomal protein S13
2247	2194	COG0100	J	Ribosomal protein S11
2162	2379	COG0101	J	tRNA U38,U39,U40 pseudouridine synthase TruA
2270	2261	COG0102	J	Ribosomal protein L13
2275	2262	COG0103	J	Ribosomal protein S9
1246	1309	COG0116	J	23S rRNA G2445 N2-methylase RlmL or tRNA-G6 N2-methylase Trm14
2264	2449	COG0124	J	Histidyl-tRNA synthetase
2210	2236	COG0130	J	tRNA U55 pseudouridine synthase TruB, may also work on U342 of tmRNA
2231	2388	COG0143	J	Methionyl-tRNA synthetase
1989	3034	COG0144	J	16S rRNA C967/C1407 or tRNA-C34 C5-methylase, RsmB/RsmF/Trm4 family
2039	5760	COG0154	J	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase
2272	2360	COG0162	J	Tyrosyl-tRNA synthetase
2280	2388	COG0172	J	Seryl-tRNA synthetase
2032	2080	COG0173	J	Aspartyl-tRNA synthetase
2274	2479	COG0180	J	Tryptophanyl-tRNA synthetase
2275	2270	COG0184	J	Ribosomal protein S15P/S13E
2258	2206	COG0185	J	Ribosomal protein S19
2263	2252	COG0186	J	Ribosomal protein S17
1589	3446	COG0189	J E H Q	Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily
2060	2079	COG0193	J	Peptidyl-tRNA hydrolase
2272	2251	COG0197	J	Ribosomal protein L16/L10AE
2253	2251	COG0198	J	Ribosomal protein L24
2261	2402	COG0199	J	Ribosomal protein S14
2259	2258	COG0200	J	Ribosomal protein L15
2047	2031	COG0203	J	Ribosomal protein L17
2081	2125	COG0211	J	Ribosomal protein L27
2251	2578	COG0215	J	Cysteinyl-tRNA synthetase
2087	2156	COG0216	J	Protein chain release factor RF1
2051	2219	COG0217	J K	Transcriptional and/or translational regulatory protein YebC/TACO1
1439	1500	COG0219	J	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain
1765	1951	COG0220	J	tRNA G46 N7-methylase TrmB
2086	2179	COG0222	J	Ribosomal protein L7/L12
2111	2893	COG0223	J	Methionyl-tRNA formyltransferase
2052	2094	COG0227	J	Ribosomal protein L28
2052	2047	COG0228	J	Ribosomal protein S16
1939	1843	COG0230	J	Ribosomal protein L34
2267	2526	COG0231	J	Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
2080	2084	COG0233	J	Ribosome recycling factor
2042	2006	COG0238	J	Ribosomal protein S18
2073	3194	COG0242	J	Peptide deformylase
2270	2262	COG0244	J	Ribosomal protein L10
1376	1707	COG0252	J E	L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D
2080	2265	COG0254	J	Ribosomal protein L31
2188	2165	COG0255	J	Ribosomal protein L29
2278	2268	COG0256	J	Ribosomal protein L18
1813	1694	COG0257	J	Ribosomal protein L36
2060	2051	COG0261	J	Ribosomal protein L21
2079	2097	COG0264	J	Translation elongation factor EF-Ts
2002	2217	COG0267	J	Ribosomal protein L33
2084	2075	COG0268	J	Ribosomal protein S20
1164	2268	COG0270	J L	DNA-cytosine methylase or eukaryotic tRNA-C38 C5-methylase, Dcm/DNMT2/TRDMT1 family
2063	2274	COG0275	J	16S rRNA C1402 N4-methylase RsmH
2053	2096	COG0290	J	Translation initiation factor IF-3
2032	2003	COG0291	J	Ribosomal protein L35
2080	2058	COG0292	J	Ribosomal protein L20
1024	1028	COG0293	J	23S rRNA U2552 or 16S rRNA-U1369 or eukaryotic tRNA-C32/G34 (ribose-2'-O)-methylase RlmE/FtsJ/TRM7
780	822	COG0301	J H	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)
1977	2341	COG0313	J	16S rRNA C1402 (ribose-2'-O) methylase RsmI
2055	2058	COG0319	J	ssRNA-specific RNase YbeY, 16S rRNA maturation enzyme
2056	2150	COG0324	J	tRNA A37 N6-isopentenylltransferase MiaA
1989	2003	COG0333	J	Ribosomal protein L32
2066	2056	COG0335	J	Ribosomal protein L19
2050	2052	COG0336	J	tRNA G37 N-methylase TrmD
2039	2151	COG0343	J	Queuine/archaeosine tRNA-ribosyltransferase
1165	1524	COG0349	J	Ribonuclease D
1948	1968	COG0357	J	16S rRNA G527 N7-methylase RsmG (former glucose-inhibited division protein B)
2060	2060	COG0359	J	Ribosomal protein L9
2085	2244	COG0360	J	Ribosomal protein S6
1951	2161	COG0361	J	Translation initiation factor IF-1
974	977	COG0423	J	Glycyl-tRNA synthetase, class II
1436	2495	COG0425	J O H	Sulfur carrier protein TusA (tRNA thiolation, molybdenum cofactor biosynthesis)
2259	2536	COG0441	J	Threonyl-tRNA synthetase
2257	2364	COG0442	J	Prolyl-tRNA synthetase
1741	1794	COG0445	J	tRNA U34 5-carboxymethylaminomethyl modifying enzyme MnmG/GidA
2163	14227	COG0456	J	Ribosomal protein S18 acetylase RimI and related acetyltransferases
2282	3770	COG0480	J	Translation elongation factor EF-G, a GTPase
2058	2089	COG0481	J	Translation elongation factor EF-4, membrane-bound GTPase
2069	2309	COG0482	J	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain
1839	2023	COG0486	J	tRNA U34 5-carboxymethylaminomethyl modifying GTPase MnmE/TrmE
2263	2339	COG0495	J	Leucyl-tRNA synthetase
2281	2357	COG0522	J	Ribosomal protein S4 or related protein
2261	2320	COG0525	J	Valyl-tRNA synthetase
2261	2275	COG0532	J	Translation initiation factor IF-2, a GTPase
2263	2362	COG0533	J	tRNA A37 threonylcarbamoyltransferase TsaD
2058	2445	COG0539	J	Ribosomal protein S1
2096	6030	COG0564	J	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific
1118	1222	COG0565	J	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase
2060	5192	COG0566	J	tRNA G18 (ribose-2'-O)-methylase SpoU
584	626	COG0585	J	tRNA(Glu) U13 pseudouridine synthase TruD
2021	3190	COG0590	J	tRNA(Arg) A34 adenosine deaminase TadA
1906	1906	COG0594	J	RNase P protein component
1394	1730	COG0595	J	mRNA degradation ribonuclease J1/J2
1304	1428	COG0603	J	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)
2052	2932	COG0617	J	tRNA nucleotidyltransferase (CCA-adding enzyme)/poly(A) polymerase
2130	4601	COG0621	J	tRNA A37 methylthiotransferase MiaB
971	1890	COG0684	J	RNA degradosome component RraA (regulator of RNase E activity)
1566	1578	COG0689	J	Ribonuclease PH
1836	1854	COG0721	J	Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit
589	1352	COG0724	J	RNA recognition motif (RRM) domain
486	577	COG0731	J	Wyosine [tRNA(Phe)-imidazoG37] synthetase, radical SAM superfamily
1987	2037	COG0742	J	16S rRNA G966 N2-methylase RsmD
1311	1318	COG0751	J	Glycyl-tRNA synthetase, beta subunit
1307	1308	COG0752	J	Glycyl-tRNA synthetase, alpha subunit
1805	1806	COG0779	J	Ribosome maturation factor RimP
1136	1148	COG0780	J	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamily
1954	1955	COG0799	J	Ribosomal silencing factor RsfS, regulates association of 30S and 50S subunits
2046	2051	COG0802	J	tRNA A37 threonylcarbamoyladenosine biosynthesis protein TsaE
1913	1916	COG0806	J	Ribosomal 30S subunit maturation factor RimM, required for 16S rRNA processing
1758	1894	COG0809	J	S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)
1983	2075	COG0816	J K L	YqgF/RuvX protein, pre-16S rRNA maturation RNase/Holliday junction resolvase/anti-termination factor
1918	2130	COG0820	J	Adenine C2-methylase RlmN of 23S rRNA A2503 and tRNA A37
1157	2358	COG0826	J	23S rRNA C2501 and tRNA U34 5'-hydroxylation protein RlhA/YrrN/YrrO, U32 peptidase family
1599	1721	COG0828	J	Ribosomal protein S21
2037	2063	COG0858	J	Ribosome-binding factor RbfA
424	494	COG1041	J	tRNA G10 N-methylase Trm11
944	980	COG1054	J	tRNA U34 5'-hydroxylase TrhO, rhodanese family
1279	1943	COG1092	J	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI
192	193	COG1093	J	Translation initiation factor 2, alpha subunit (eIF-2alpha)
674	675	COG1094	J	rRNA processing protein Krr1/Pno1, contains KH domain
37	49	COG1103	J	Archaeal Cys-tRNA synthase (O-phospho-L-seryl-tRNA:Cys-tRNA synthase)
2184	16983	COG1131	J V	Ribosome-associated ATPase or ATPase component of an ABC-type multidrug transport system
1972	2245	COG1159	J	GTPase Era, involved in 16S rRNA processing
2052	2604	COG1160	J	Double Era-like domain GTPase Der
777	990	COG1161	J	Ribosome biogenesis GTPase RbgA
1646	2004	COG1162	J	Ribosome biogenesis GTPase RsgA
234	241	COG1163	J	Ribosome-interacting GTPase RBG1
989	1152	COG1179	J	tRNA A37 threonylcarbamoyladenosine dehydratase
178	294	COG1184	J	Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family
2026	2036	COG1185	J	Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)
2052	3173	COG1186	J	Protein chain release factor PrfB
2016	4008	COG1187	J	Pseudouridylate synthase RsuA/RluF, specific for 16S rRNA U516, 23S rRNA U2605, and tRNA(Tyr)-35
1416	1418	COG1188	J	Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain
1248	1258	COG1189	J	Predicted rRNA methylase YqxC, contains S4 and FtsJ domains
1779	1857	COG1190	J	Lysyl-tRNA synthetase, class II
965	1151	COG1193	J	Bacterial ribosome collision sensor RqcU, MutS2 ATPase family
701	732	COG1206	J	Folate-dependent tRNA-U54 methylase TrmFO/GidA
1563	3090	COG1208	J M	NDP-sugar pyrophosphorylase, includes eIF-2Bgamma, eIF-2Bepsilon, and LPS biosynthesis protein s
2049	2049	COG1214	J	tRNA A37 threonylcarbamoyladenosine modification protein TsaB
1491	2285	COG1234	J	Ribonuclease BN, tRNA processing enzyme
1079	1466	COG1236	J	RNA processing exonuclease, beta-lactamase fold, Cft2 family
377	382	COG1243	J	tRNA U34 5-carboxymethylaminomethylation enzyme Elp3 (RNA elongator complex protein 3), contains radical SAM and acetyltransferase domains
200	208	COG1244	J	Archaeosine formation enzyme, radical SAM superfamily
300	355	COG1245	J	Translation initiation factor RLI1, contains Fe-S and AAA+ ATPase domains
181	181	COG1258	J	tRNA U54 and U55 pseudouridine synthase Pus10
836	863	COG1293	J O	Ribosome quality control (RQC) protein RqcH, Rqc2/NEMF/Tae2 family, contains fibronectin-(FbpA) and RNA- (NFACT) binding domains
169	169	COG1303	J	tRNA C56-2-O'-methylase, SpoU family
365	369	COG1323	J	tRNA-Met C34-N4-acetylcytidine synthase TmcAL
84	92	COG1341	J	Polynucleotide 5'-kinase, involved in rRNA processing
633	801	COG1358	J	Ribosomal protein L7Ae or related RNA K-turn-binding protein
150	151	COG1369	J	RNase P/RNase MRP subunit POP5
171	173	COG1370	J	tRNA-guanine transglycosylase, archaeosine-15-forming, contains TGT and PUA domains
349	354	COG1371	J	Archease, activates RNA ligation by RtcB (tRNA splicing)
35	35	COG1374	J	Rbosome biogenesis protein Nip4, contains PUA domain
187	196	COG1383	J	Ribosomal protein S17E
513	522	COG1384	J	Lysyl-tRNA synthetase, class I
1921	2059	COG1385	J	16S rRNA U1498 N3-methylase RsmE
1660	1660	COG1399	J	23S rRNA accumulation protein YceD (essential in plants, uncharacterized in bacteria)
192	195	COG1412	J	rRNA-processing protein FCF1
1291	2209	COG1418	J R	HD superfamily phosphodieaserase, includes HD domain of RNase Y
53	60	COG1431	J V	PIWI domain, catalyzes dsRNA-guided hydrolysis of ssRNA, involved in RNA silencing, RNA metabolism and antiviral defense
177	179	COG1439	J	rRNA maturation endonuclease Nob1
323	347	COG1444	J	tRNA(Met) C34 N-acetyltransferase TmcA
193	193	COG1471	J	Ribosomal protein S4E
1545	1549	COG1490	J	D-aminoacyl-tRNA deacylase
187	187	COG1498	J	Box C/D ribonucleoprotein Nop56/Prp31/SIK1 subunit
181	189	COG1499	J	NMD protein affecting ribosome stability and mRNA decay
193	195	COG1500	J	Ribosome maturation protein Sdo1
251	318	COG1503	J	Peptide chain release factor 1 (eRF1)
1458	1884	COG1514	J	RNA 2',3'-cyclic phosphodiesterase (2'-5' RNA ligase)
1830	2467	COG1530	J	Ribonuclease G or E
990	990	COG1534	J	RNA-binding protein YhbY
196	197	COG1537	J	Stalled ribosome rescue protein Dom34, pelota family
1947	2320	COG1544	J	Ribosome-associated translation inhibitor RaiA
141	176	COG1549	J	Archaeosine tRNA-ribosyltransferase, contains uracil-DNA-glycosylase and PUA domains
221	236	COG1552	J	Ribosomal protein L40E
421	520	COG1553	J	tRNA U34 sulfur transfer complex TusBCD TusD component, DsrE family
1374	1380	COG1561	J	Endoribonuclease YloC, YicC family
180	256	COG1571	J	tRNA(Ile2) C34 agmatinyltransferase TiaS
1503	1520	COG1576	J	23S rRNA pseudoU1915 N3-methylase RlmH
185	186	COG1588	J	RNase P/RNase MRP subunit p29
52	63	COG1590	J	tRNA(Phe) wybutosine-synthesizing methylase Tyw3
1399	1909	COG1600	J	Epoxyqueuosine reductase QueG (queuosine biosynthesis)
188	218	COG1601	J	Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain
148	149	COG1603	J	RNase P/RNase MRP subunit p30
137	137	COG1617	J	tRNA threonylcarbamoyladenosine modification (KEOPS) complex, Cgi121 subunit
192	193	COG1631	J	Ribosomal protein L44E
190	193	COG1632	J	Ribosomal protein L15E
460	462	COG1636	J	Epoxyqueuosine reductase QueH (tRNA modification)
1105	1536	COG1643	J	HrpA-like RNA helicase
176	177	COG1650	J	D-tyrosyl-tRNA(Tyr) deacylase
369	455	COG1658	J	5S rRNA maturation ribonuclease M5, contains TOPRIM domain
1947	11347	COG1670	J O	Protein N-acetyltransferase, RimJ/RimL family
192	241	COG1676	J	tRNA splicing endonuclease subunit SEN34
923	1172	COG1690	J	RNA-splicing ligase RtcB, repairs tRNA damage
190	190	COG1717	J	Ribosomal protein L32E
698	881	COG1720	J	tRNA (Thr-GGU) A37 N6-methylase
167	171	COG1723	J	Mitochondrial translation protein, Rmd1/RMND1/DUF155 family
192	201	COG1727	J	Ribosomal protein L18E
183	190	COG1736	J	Diphthamide synthase subunit DPH2
950	1036	COG1738	J	Queuosine precursor transporter YhhQ, DUF165 family
200	204	COG1746	J	tRNA nucleotidyltransferase (archaeal CCA-adding enzyme)
71	76	COG1756	J	rRNA pseudouridine-1189 N-methylase Emg1, Nep1/Mra1 family
183	185	COG1798	J	Diphthamide biosynthesis methyltransferase
505	658	COG1813	J	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains
73	95	COG1818	J	tRNA(Ser,Leu) C12 N-acetylase TAN1, contains THUMP domain
1866	1886	COG1825	J	Ribosomal protein L25 (general stress protein Ctc)
1949	1919	COG1841	J	Ribosomal protein L30/L7E
339	352	COG1859	J	RNA:NAD 2'-phosphotransferase, TPT1/KptA family
209	213	COG1867	J	tRNA G26 N,N-dimethylase Trm1
186	186	COG1889	J	Fibrillarin-like rRNA 2'-O-methylase NOP1
190	192	COG1890	J	Ribosomal protein S3AE
517	594	COG1899	J O	Deoxyhypusine synthase
146	153	COG1901	J	tRNA pseudouridine-54 N-methylase
125	126	COG1911	J	Ribosomal protein L30E
651	784	COG1921	J	Seryl-tRNA(Sec) selenium transferase
432	432	COG1939	J	23S rRNA maturation mini-RNase III
610	791	COG1944	J	Ribosomal protein S12 methylthiotransferase accessory factor YcaO
186	186	COG1976	J	Translation initiation factor 6 (eIF-6)
257	263	COG1990	J	Peptidyl-tRNA hydrolase
203	218	COG1997	J	Ribosomal protein L37AE/L43A
187	190	COG1998	J	Ribosomal protein S27AE
1678	1695	COG2001	J	MraZ, DNA-binding transcriptional regulator and inhibitor of RsmH methyltransferase activity
189	194	COG2004	J	Ribosomal protein S24E
193	195	COG2007	J	Ribosomal protein S8E
173	176	COG2016	J	Predicted ribosome-associated RNA-binding protein Tma20, contains PUA domain
181	182	COG2023	J	Ribonuclease P protein subunit RPR2
43	43	COG2024	J	O-phosphoseryl-tRNA(Cys) synthetase
165	167	COG2042	J	Ribosome biogenesis protein Tsr3 (rRNA maturation)
209	214	COG2051	J	Ribosomal protein S27E
188	188	COG2053	J	Ribosomal protein S28E/S33
192	195	COG2058	J	Ribosomal protein L12E/L44/L45/RPP1/RPP2
190	192	COG2075	J	Ribosomal protein L24E
190	190	COG2092	J	Translation elongation factor EF-1beta
185	185	COG2097	J	Ribosomal protein L31E
424	479	COG2102	J	Diphthamide synthase (EF-2-diphthine--ammonia ligase)
1394	1531	COG2104	J H	Sulfur carrier protein ThiS/TtuB (thiamine biosynthesis, tRNA 2-thiouridylation)
1101	1456	COG2110	J	O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain
90	90	COG2117	J	Adenosine-binding enzyme, AANH-like superfamily
192	193	COG2125	J	Ribosomal protein S6E (S10)
178	179	COG2126	J	Ribosomal protein L37E
933	969	COG2131	J F	dCMP deaminase ComEB or tRNA-C8 deaminase CDAT8
58	58	COG2136	J	rRNA maturation protein Rpf1, contains Brix/IMP4 (anticodon-binding) domain
190	190	COG2139	J	Ribosomal protein L21E
190	190	COG2147	J	Ribosomal protein L19E
140	140	COG2157	J	Ribosomal protein L20A (L18A)
211	211	COG2163	J	Ribosomal protein L14E/L6E/L27E
971	1063	COG2166	J O	Sulfur transfer protein SufE/CsdE, Fe-S cluster assembly
167	167	COG2167	J	Ribosomal protein L39E
287	290	COG2168	J	tRNA U34 sulfur transfer complex TusBCD TusB component, DsrH family
61	61	COG2174	J	Ribosomal protein L34E
2207	18977	COG2226	J H	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG or 23S rRNA G745 methylase RmlAII or tRNA-U5 methylase TRM9
192	193	COG2238	J	Ribosomal protein S19E (S16A)
184	215	COG2260	J	rRNA maturation protein Nop10, contains Zn-ribbon domain
2033	2210	COG2262	J	50S ribosomal subunit-associated GTPase HflX
1653	1882	COG2264	J	Ribosomal protein L11 methylase PrmA
1926	2899	COG2265	J	tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family
546	547	COG2269	J	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)
412	414	COG2302	J	Ribosome-associated quality control (RQC) protein YlmH, contains S4-like domain
403	406	COG2384	J	tRNA A22 N1-methylase
223	248	COG2404	J T	Oligoribonuclease NrnA/c-di-AMP phosphodiesterase DhhP, DHH superfamily
33	33	COG2419	J	tRNA (A,G)9-N1-methylase TRM10
20	20	COG2428	J	Rps3 or RNA methylase involved in ribosome biogenesis, SPOUT family
34	34	COG2451	J	Ribosomal protein L35AE/L33A
806	808	COG2501	J	Ribosome-associated protein YbcJ, S4-like RNA-binding protein
209	216	COG2511	J	Archaeal Glu-tRNAGln amidotransferase subunit E, contains GAD domain
657	726	COG2519	J	tRNA A57/A58 N1-methylase Trm61
252	429	COG2520	J	tRNA G37 N1-methylase Trm5
490	498	COG2603	J	tRNA U34 2-selenouridine synthase SelU, contains rhodanese domain
1305	2215	COG2606	J	Cys-tRNA(Pro) deacylase, prolyl-tRNA editing enzyme YbaK/EbsC
1042	1043	COG2740	J A	RNA-binding protein, RNase P regulator RnpM/YlxR/DUF448 family
936	1205	COG2813	J	16S rRNA G1207 or 23S rRNA G1835 methylase RsmC/RlmG
1226	1296	COG2835	J	RNA methyltransferase activator Trm112/YbaR
850	953	COG2840	J L	Stalled ribosome-rescuing mRNA endonuclease or DNA-nicking endonuclease, Smr domain
565	704	COG2850	J	Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain
935	1010	COG2867	J	Ribosome association toxin PasT (RatA) of the RatAB toxin-antitoxin module
491	554	COG2872	J	Ser-tRNA(Ala) deacylase AlaX (editing enzyme)
2249	3627	COG2890	J	Methylase of polypeptide chain release factors
142	146	COG2892	J	tRNA A37 N6-threonylcarbamoyladenosine modification (KEOPS) complex, Pcc1 subunit
351	356	COG2904	J	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, N-terminal domain
412	637	COG2920	J	tRNA U34 sulfur transfer complex TusBCD TusE component, DsrC family
307	312	COG2923	J	tRNA U34 sulfur transfer complex TusBCD TusC component, DsrF family
323	330	COG2933	J	23S rRNA C2498 (ribose-2'-O)-methylase RlmM
606	608	COG2961	J	23S rRNA A2030 N6-methylase RlmJ
470	471	COG3028	J	Ribosomal 50S subunit-associated protein YjgA, DUF615 family
102	103	COG3036	J	Stalled ribosome alternative rescue factor ArfA
292	421	COG3041	J V	mRNA-degrading endonuclease YafQ (mRNA interferase), toxin component of the YafQ-DinJ toxin-antitoxin module
146	148	COG3076	J	Regulator of RNase E activity RraB
128	128	COG3078	J	Ribosome assembly protein YihI, activator of Der GTPase
185	189	COG3101	J	Elongation factor P hydroxylase EpmC (EF-P beta-lysylation pathway)
239	242	COG3129	J	23S rRNA A1618 N6-methylase RlmF
163	177	COG3130	J	Ribosome modulation factor
271	380	COG3148	J	tRNA U47 aminocarboxypropyltransferaseTapT/TuaA/ YfiP, DTW domain
123	138	COG3231	J	Aminoglycoside phosphotransferase
376	390	COG3270	J	Ribosome biogenesis protein, NOL1/NOP2/FMU family
576	594	COG3276	J	Selenocysteine-specific translation elongation factor SelB
154	154	COG3277	J	rRNA processing protein Gar1
527	608	COG3481	J	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily
403	511	COG3642	J	tRNA A37 N6-threonylcarbamoyl transferase component Bud32
545	546	COG3688	J	EndoRNase involved in mRNA decay, NYN (Nedd4-BP1/Rae1/YacP nuclease) family, contains PIN domain
318	330	COG3719	J	Ribonuclease I
388	482	COG3751	J O	Proline 4-hydroxylase (includes Rps23 Pro-64 3,4-dihydroxylase Tpa1), contains SM-20 domain
98	105	COG4021	J	tRNA(His) 5'-end guanylyltransferase/3'-5' nucleotidyltransferase
36	38	COG4080	J	SpoU rRNA methylase family enzyme
33	33	COG4088	J V	tRNA uridine 5-carbamoylmethylation protein Kti12 (Killer toxin insensitivity protein)
1395	1405	COG4108	J	Peptide chain release factor RF-3
783	790	COG4121	J	tRNA U34 5-methylaminomethyl-2-thiouridine-forming methyltransferase MnmC
1357	2195	COG4122	J	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM
1219	1380	COG4123	J	tRNA1(Val) A37 N6-methylase TrmN6
132	133	COG4286	J A	3'-5' RNA exonuclease MYG1 involved in processing mRNA and rRNA, MYG1/UPF0160 family
23	24	COG4352	J	Ribosomal protein L13E
197	198	COG4394	J	Elongation factor P Arg32-rhamnosyltransferase EarP
399	455	COG4445	J	tRNA A37 isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE
370	556	COG4575	J	Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 family
268	374	COG4680	J V	mRNA-degrading endonuclease (mRNA interferase) HigB, toxic component of the HigAB toxin-antitoxin module
221	244	COG4694	J	Wobble nucleotide-excising tRNase
250	266	COG4708	J F	ECF-type transporter of queuosine precursor, membrane (S) component
162	194	COG4725	J	N6-adenosine-specific RNA methylase IME4
54	55	COG4830	J	Ribosomal protein S26e
37	38	COG4901	J	Ribosomal protein S25e
51	51	COG4919	J	Archaeal ribosomal protein RPS30/eS30
20	21	COG4937	J	Ferredoxin-fold anticodon binding domain
26	76	COG5238	J	Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport
191	213	COG5256	J	Translation elongation factor EF-1alpha (GTPase)
192	192	COG5257	J	Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase)
4	4	COG5269	J	Ribosome-associated chaperone zuotin, contains DnaJ domain
68	105	COG5270	J	PUA domain (predicted RNA-binding domain)
209	266	COG5271	J	Midasin, AAA ATPase with vWA domain, involved in ribosome maturation
11	11	COG5324	J	tRNA splicing ligase
181	192	COG5459	J	Ribosomal protein RSM22 (predicted mitochondrial rRNA methylase)
75	133	COG5758	J C	RNA-binding protein Tab2, reqiured for psaB translation