J - COG2265 - tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family

Definition to JSON COGs to JSON

COG symbol: TrmA

PDB entry: 1UWV

Pathways: tRNA modification

Basic Stats

Organisms: 1089/1309

Genes: 1639/3456089

Proteins: 1639/3213255

Median Protein Length: 423.5

Taxonomy Categories

Click on table rows for more information

ARCHAEA

CRENARCHAEOTA [5/25 organisms 5 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000213215.1	Acidianus_hospitalis_W1	933801	1
GCF_000144915.1	Acidilobus_saccharovorans_345-15	666510	0
GCA_000011125.1	Aeropyrum_pernix_K1	272557	0
GCF_000317795.1	Caldisphaera_lagunensis_DSM_15908	1056495	1
GCF_000018305.1	Caldivirga_maquilingensis_IC-167	397948	0
GCF_000020905.1	Desulfurococcus_amylolyticus_1221n	490899	0
GCA_000258425.1	Fervidicoccus_fontis_Kam940	1163730	0
GCF_000015145.1	Hyperthermus_butylicus_DSM_5456	415426	0
GCF_000017945.1	Ignicoccus_hospitalis_KIN4I	453591	0
GCA_000145985.1	Ignisphaera_aggregans_DSM_17230	583356	0
GCF_000016605.1	Metallosphaera_sedula_DSM_5348	399549	0
GCF_000007225.1	Pyrobaculum_aerophilum_IM2	178306	1
GCF_001412615.1	Pyrodictium_delaneyi_Su06	1273541	0
GCF_000223395.1	Pyrolobus_fumarii_1A	694429	0
GCF_000007005.1	Saccharolobus_solfataricus_P2	273057	1
GCF_000092465.1	Staphylothermus_hellenicus_DSM_12710	591019	0
GCF_003967175.1	Sulfodiicoccus_acidiphilus_HS-1	1670455	0
GCF_000012285.1	Sulfolobus_acidocaldarius_DSM_639	330779	0
GCA_000022445.1	Sulfolobus_islandicus_M.16.4	426118	0
GCF_000011205.1	Sulfurisphaera_tokodaii_7	273063	1
GCF_000446015.1	Thermofilum_adornatus	1365176	0
GCF_000264495.1	Thermogladius_calderae_1633	1184251	0
GCF_000253055.1	Thermoproteus_tenax_Kra_1	768679	0
GCF_000092185.1	Thermosphaera_aggregans_DSM_11486	633148	0
GCF_000148385.1	Vulcanisaeta_distributa_DSM_14429	572478	0

EURYARCHAEOTA [18/79 organisms 29 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000008665.1	Archaeoglobus_fulgidus_DSM_4304	224325	0
GCF_000025505.1	Ferroglobus_placidus_DSM_10642	589924	0
GCF_000789255.1	Geoglobus_acetivorans_SBH6	565033	0
GCF_000025665.1	Aciduliprofundum_boonei_T469	439481	1
GCF_000196895.1	Halalkalicoccus_jeotgali_B3	795797	0
GCF_001011115.1	Halanaeroarchaeum_sulfurireducens_HSR2	1604004	0
GCF_000011085.1	Haloarcula_marismortui_ATCC_43049	272569	0
GCF_003058365.1	Haloarculaceae_archaeon_HArcel1	1679096	0
GCF_000006805.1	Halobacterium_salinarum_NRC-1_ATCC_700922	64091	0
GCF_000226975.2	Halobiforma_lacisalsi_AJ5	358396	0
GCF_001767315.1	Halodesulfurarchaeum_formicicum_HTSR1	1873524	0
GCF_000025685.1	Haloferax_volcanii_DS2	309800	0
GCF_000172995.2	Halogeometricum_borinquense_DSM_11551_PR_3	469382	0
GCF_002788215.1	Halohasta_litchfieldiae_tADL	1073996	0
GCF_000023965.1	Halomicrobium_mukohataei_DSM_12286	485914	0
GCF_002355635.1	Halopenitus_persicus_CBA1233	1048396	0
GCF_000224475.1	halophilic_archaeon_DL31	756883	0
GCF_000217715.1	Halopiger_xanaduensis_SH-6	797210	0
GCF_003856835.1	Haloplanus_aerogenes_JCM_16430	660522	0
GCF_000237865.1	Haloquadratum_walsbyi_C23	768065	0
GCF_000470655.1	Halorhabdus_tiamatea_SARL4B_type_strain_SARL4B	1033806	0
GCF_001989615.1	Halorientalis_IM1011	1932360	0
GCF_000022205.1	Halorubrum_lacusprofundi_ATCC_49239	416348	0
GCF_004087835.1	Halorussus_RC-68	2505977	0
GCF_000517625.1	Halostagnicola_larsenii_XH-48	797299	0
GCF_000025325.1	Haloterrigena_turkmenica_DSM_5511	543526	0
GCA_000328525.1	Halovivax_ruber_XH-70	797302	0
GCF_000025625.1	Natrialba_magadii_ATCC_43099	547559	0
GCF_000281695.1	Natrinema_J7-2	406552	0
GCF_000230715.2	Natronobacterium_gregoryi_SP2	797304	0
GCF_000328685.1	Natronococcus_occultus_SP4	694430	0
GCF_002156705.1	Natronolimnobius_aegyptiacus_JWNM-HA_15	745377	0
GCF_000026045.1	Natronomonas_pharaonis_DSM_2160_Gabara	348780	0
GCF_000403645.1	Salinarchaeum_Harcht-Bsk1	1333523	0
GCF_002906575.1	Salinigranum_rubrum_GX10	755307	0
GCA_000246735.1	uncultured_marine_group_II_euryarchaeote	274854	0
GCF_000191585.1	Methanobacterium_lacus_AL-21	877455	0
GCF_000024185.1	Methanobrevibacter_ruminantium_M1	634498	1
GCF_000012545.1	Methanosphaera_stadtmanae_DSM_3091	339860	0
GCF_000008645.1	Methanothermobacter_thermautotrophicus_Delta_H	187420	0
GCF_000166095.1	Methanothermus_fervidus_DSM_2088	523846	1
GCF_000091665.1	Methanocaldococcus_jannaschii_DSM_2661	243232	0
GCF_000011585.1	Methanococcus_maripaludis_S2	267377	0
GCF_000179575.2	Methanothermococcus_okinawensis_IH1	647113	0
GCF_000214415.1	Methanotorris_igneus_Kol_5	880724	0
GCF_000063445.1	Methanocella_arvoryzae_MRE50	351160	0
GCF_000013725.1	Methanococcoides_burtonii_DSM_6242	259564	1
GCF_000015765.1	Methanocorpusculum_labreanum_Z	410358	0
GCF_900079125.1	Methanoculleus_bourgensis	83986	2
GCF_000196655.1	Methanohalobium_evestigatum_Z-7303	644295	0
GCF_000025865.1	Methanohalophilus_mahii_DSM_5219	547558	1
GCF_000147875.1	Methanolacinia_petrolearia_DSM_11571	679926	2
GCF_000235685.2	Methanolinea_tarda_NOBI-1	882090	0
GCF_000306725.1	Methanolobus_psychrophilus_R15	1094980	1
GCF_000328665.1	Methanomethylovorans_hollandica_DSM_15978	867904	1
GCF_000327485.1	Methanoregula_formicica_SMSP	593750	0
GCF_000235565.1	Methanosaeta_harundinacea_6Ac	1110509	0
GCF_000217995.1	Methanosalsum_zhilinae_DSM_4017	679901	0
GCA_000007345.1	Methanosarcina_acetivorans_C2A	188937	2
GCF_000007065.1	Methanosarcina_mazei_Go1	192952	1
GCF_000021965.1	Methanosphaerula_palustris_E1-9c	521011	1
GCF_000013445.1	Methanospirillum_hungatei_JF-1	323259	2
GCF_000204415.1	Methanothrix_soehngenii_GP6	990316	0
GCA_000007185.1	Methanopyrus_kandleri_AV19	190192	0
GCA_001761425.1	Nanohaloarchaea_archaeon_SG9	1737403	0
GCF_000725425.1	Palaeococcus_pacificus_DY20341	1343739	2
GCF_000195935.2	Pyrococcus_abyssi_GE5	272844	3
GCF_000007305.1	Pyrococcus_furiosus_DSM_3638	186497	3
GCF_000009965.1	Thermococcus_kodakarensis_KOD1	69014	3
GCF_000404225.1	Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1	1295009	0
GCF_003711245.1	Candidatus_Methanomethylophilus_alvus_Mx-05	1291540	1
GCF_000800805.1	Candidatus_Methanoplasma_termitum_MpT1	1577791	0
GCF_900090055.1	Cuniculiplasma_divulgatum_PM4_JCM_30641_VKM_B-2940	1673428	0
GCF_000152265.2	Ferroplasma_acidarmanus_fer1	333146	0
GCF_001560915.1	methanogenic_archaeon_ISO4-H5	1495144	0
GCF_000008265.1	Picrophilus_torridus_DSM_9790	263820	0
GCF_000195915.1	Thermoplasma_acidophilum_DSM_1728	273075	0
GCF_000011185.1	Thermoplasma_volcanium_GSS1	273116	0
GCF_000350305.1	Thermoplasmatales_archaeon_BRNA1	1054217	0

THAUMARCHAEOTA [0/12 organisms 0 genes]

OTHER ARCHAEA [1/6 organisms 1 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000019605.1	Candidatus_Korarchaeum_cryptofilum_OPF8	374847	0
GCF_002214165.1	Candidatus_Mancarchaeum_acidiphilum_Mia14	1920749	0
GCA_001552015.1	Candidatus_Nanopusillus_acidilobi	1577684	0
GCA_000008085.1	Nanoarchaeum_equitans_Kin4-M	228908	1
GCF_002952775.1	archaeon_AArc-Sl	2055893	0
GCA_000830295.1	archaeon_GW2011_AR15	1579373	0

BACTERIA

ACIDOBACTERIA [7/7 organisms 8 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000022565.1	Acidobacterium_capsulatum_ATCC_51196	240015	1
GCF_000014005.1	Candidatus_Koribacter_versatilis_Ellin345	204669	1
GCF_000178975.2	Granulicella_tundricola_MP5ACTX9	1198114	1
GCF_000265425.1	Terriglobus_roseus_DSM_18391	926566	1
GCF_000226295.1	Chloracidobacterium_thermophilum_B	981222	1
GCF_000014905.1	Candidatus_Solibacter_usitatus_Ellin6076	234267	1
GCF_001618865.1	Luteitalea_pratensis_DSM_100886_HEG_-6_39	1855912	2

ACTINOBACTERIA [150/155 organisms 230 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000023265.1	Acidimicrobium_ferrooxidans_DSM_10331	525909	0
GCF_000310065.1	Acidipropionibacterium_acidipropionici_ATCC_4875	1171373	2
GCF_000015025.1	Acidothermus_cellulolyticus_11B_ATCC_43068	351607	1
GCF_002234535.1	Actinoalloteichus_hoggarensis_DSM_45943	1470176	1
GCF_003073475.1	Actinobaculum_313	2495645	2
GCF_003589885.1	Actinomadura_amylolytica_YIM_77502	1411117	1
GCA_002355915.1	Actinomyces_naeslundii_ATCC_27039	1655	2
GCF_000494755.1	Actinoplanes_friuliensis_DSM_7358	1246995	1
GCF_002263515.1	Actinopolyspora_erythraea_YIM_90600	414996	1
GCF_000023245.1	Actinosynnema_mirum_DSM_43827	446462	1
GCF_000724605.1	Actinotignum_schaalii_CCUG_27420	59505	2
GCF_001509405.1	Aeromicrobium_erythreum_AR18	2041	2
GCF_001660485.1	Agromyces_aureus_AR33	453304	2
GCF_900070365.1	Alloactinosynnema_L-07	1653480	1
GCF_000220945.1	Amycolatopsis_mediterranei_S699	713604	1
GCF_000092365.1	Arcanobacterium_haemolyticum_DSM_20595	644284	2
GCF_001189535.1	Arsenicicoccus_oral_taxon_190_F0371	1658671	2
GCF_000755585.2	Arthrobacter_alpinus_A3	656366	1
GCF_002355535.1	Aurantimicrobium_minutum_KNC	708131	1
GCF_003185725.2	Auritidibacter_NML130574	2170745	2
GCF_003391095.1	Austwickia_chelonae_LK16-18	100225	2
GCF_000023105.1	Beutenbergia_cavernae_DSM_12333	471853	2
GCF_000020425.1	Bifidobacterium_longum_sub_infantis_ATCC_15697_JCM_1222_DSM_20088	391904	1
GCF_000284015.1	Blastococcus_saxobsidens_DD2	1146883	2
GCF_000023405.1	Brachybacterium_faecium_DSM_4810	446465	2
GCF_001729525.1	Brevibacterium_aurantiacum_SMQ-1335	273384	2
GCF_002287885.2	Candidatus_Nanopelagicus_limnes	1884634	1
GCF_002287925.1	Candidatus_Planktophila_lacus	1884913	1
GCF_001854225.1	Candidatus_Rhodoluna_planktonica_MWH-Dar1	535712	1
GCF_000024025.1	Catenulispora_acidiphila_DSM_44928	479433	1
GCF_000212695.1	Cellulomonas_fimi_ATCC_484	590998	2
GCF_002162335.1	Cellulosimicrobium_cellulans_PSBB019	1710	2
GCF_000069225.1	Clavibacter_michiganensis_sub_sepedonicus_ATCC_33113	31964	2
GCF_002096055.1	Cnuibacter_physcomitrellae_XAT	1619308	2
GCF_001457455.1	Corynebacterium_diphtheriae_NCTC11397	1717	1
GCF_000011325.1	Corynebacterium_glutamicum_ATCC_13032	196627	1
GCF_001679725.1	Cryobacterium_arcticum_PAMC_27867	670052	1
GCF_002025645.1	Curtobacterium_pusillum_AA3	69373	2
GCF_000008345.1	Cutibacterium_acnes_KPA171202	267747	1
GCF_001678905.1	Dermabacter_vaginalis_AD1-86	1630135	2
GCF_000725405.1	Dermacoccus_nishinomiyaensis_M25	1274	3
GCF_900187045.1	Dermatophilus_congolensis_NCTC13039	1863	2
GCF_900070355.1	Devriesea_agamarum_IMP2	472569	2
GCF_001659785.1	Dietzia_timorensis_ID05-A0528	499555	1
GCF_003952265.1	Flaviflexus_salsibiostraticola_KCTC_33148	1282737	2
GCF_000018005.1	Frankia_EAN1pec_EAN1.pec	298653	1
GCF_001577365.1	Frondihabitans_PAMC_28766	1795630	1
GCF_000159155.2	Gardnerella_vaginalis_ATCC_14019	525284	1
GCF_000025345.1	Geodermatophilus_obscurus_DSM_43160	526225	2
GCF_003710105.1	Georgenia_ZLJ0423	2483799	1
GCF_000197735.1	Glutamicibacter_arilaitensis_Re117	861360	3
GCF_000143885.2	Gordonia_KTR9	337191	1
GCF_003627055.1	Gryllotalpicola_2DFW10M-5	2419771	2
GCF_000214175.1	Hoyosella_subflava_DQS3-9A1	443218	1
GCF_003347035.1	Humibacter_BT305	2282656	2
GCA_000348785.1	Ilumatobacter_coccineus_YM16-304	1313172	1
GCF_000184685.1	Intrasporangium_calvum_DSM_43043	710696	2
GCF_000215105.1	Isoptericola_variabilis_225	743718	2
GCF_001889125.1	Janibacter_indicus_YFY001	857417	2
GCF_000024065.1	Jonesia_denitrificans_DSM_20603	471856	2
GCF_001302585.1	Kibdelosporangium_phytohabitans_KLBMP1111	860235	1
GCF_000017305.1	Kineococcus_radiotolerans_SRS30216_ATCC_BAA-149	266940	2
GCF_000269985.1	Kitasatospora_setae_KM-6054	452652	2
GCF_000010285.1	Kocuria_rhizophila_DC2201_DC2201_NBRC_103217	378753	2
GCF_000024345.1	Kribbella_flavida_DSM_17836	479435	1
GCF_000525635.1	Kutzneria_albida_DSM_43870	1449976	1
GCF_000023925.1	Kytococcus_sedentarius_DSM_20547	478801	2
GCF_001281505.1	Lawsonella_clevelandensis_X1698	1528099	1
GCF_000470775.1	Leifsonia_xyli_sub_cynodontis_DSM_46306	1389489	2
GCF_001701025.1	Lentzea_guizhouensis_DHS_C013	1586287	1
GCF_004208635.1	Leucobacter_triazinivorans_JW-1	1784719	2
GCF_001190945.1	Luteipulveratus_mongoliensis_MN07-A0370	571913	1
GCF_003627075.1	Lysinimonas_2DFWR-13	2419774	2
GCF_000202635.1	Microbacterium_testaceum_StLB037	979556	1
GCF_002355395.1	Microcella_alkaliphila_JAM_AC0309	279828	3
GCF_000023205.1	Micrococcus_luteus_NCTC_2665	465515	2
GCF_000270245.1	Microlunatus_phosphovorus_NM-1	1032480	1
GCF_000145235.1	Micromonospora_aurantiaca_ATCC_27029	644283	1
GCF_900289045.1	Micropruina_glycogenica	75385	1
GCF_001542775.1	Microterricola_viridarii_ERGS5_02	412690	2
GCF_003074035.1	Miniimonas_S16	2171623	2
GCF_000196535.1	Mobiluncus_curtisii_ATCC_43063	548479	2
GCF_000306785.1	Modestobacter_marinus_BC501	477641	2
GCF_003065425.1	Mycetocola_449_449_CGMCC_1.16372	2079792	1
GCF_000007865.1	Mycobacterium_avium_sub_paratuberculosis_K-10	262316	0
GCF_000195855.1	Mycobacterium_leprae_TN	272631	0
GCF_000018345.1	Mycobacterium_marinum_M	216594	1
GCF_000195955.2	Mycobacterium_tuberculosis_H37Rv	83332	1
GCF_000013925.1	Mycobacterium_ulcerans_Agy99	362242	1
GCF_000069185.1	Mycobacteroides_abscessus	561007	1
GCF_000015005.1	Mycolicibacterium_smegmatis_MC2_155	246196	1
GCF_000024365.1	Nakamurella_multipartita_DSM_44233	479431	1
GCF_001887245.1	Neomicrococcus_aestuarii_B18	556325	2
GCF_000250675.2	Nocardia_brasiliensis_ATCC_700358_HUJEG-1	1133849	1
GCF_000015265.1	Nocardioides_JS614	196162	2
GCF_000294515.1	Nocardiopsis_alba_ATCC_BAA-2165	1205910	1
GCF_002057455.1	Nonomuraea_ATCC_55076	1909395	2
GCF_003351765.1	Ornithinimicrobium_AMA3305	2283195	2
GCF_000014925.1	Paenarthrobacter_aurescens_TC1	290340	1
GCF_001042675.1	Parascardovia_denticolens_DSM_10105_JCM_12538	864564	1
GCF_000785495.1	Pimelobacter_simplex_VKM_Ac-2033D	2045	2
GCF_003030385.1	Plantactinospora_BB1	2071627	1
GCF_002950575.1	Pontimonas_salivibrio_CL-TW6	1159327	1
GCF_002240355.1	Prauserella_marina_DSM_45268	530584	1
GCF_000940845.1	Propionibacterium_freudenreichii_sub_freudenreichii_DSM_20271	66712	1
GCF_000022025.1	Pseudarthrobacter_chlorophenolicus_A6	452863	3
GCF_000196675.1	Pseudonocardia_dioxanivorans_CB1190	675635	1
GCF_000277715.1	Pseudopropionibacterium_propionicum_F0230a	767029	2
GCF_000950575.1	Psychromicrobium_lacuslunae_IHBB_11108	1618207	1
GCF_000875675.1	Rathayibacter_toxicus_70137	145458	1
GCF_000018885.1	Renibacterium_salmoninarum_ATCC_33209	288705	2
GCF_000014565.1	Rhodococcus_jostii_RHA1	101510	1
GCF_000699505.1	Rhodoluna_lacicola_MWH-Ta8	529884	2
GCF_000164695.2	Rothia_dentocariosa_ATCC_17931	762948	2
GCF_000023865.1	Saccharomonospora_viridis_DSM_43017	471857	1
GCF_000062885.1	Saccharopolyspora_erythraea_NRRL_2338	405948	1
GCF_000328705.1	Saccharothrix_espanaensis_DSM_44229_type_strain_DSM_44229	1179773	1
GCF_004118935.1	Salinibacterium_UTAS2018	2508880	2
GCF_000018265.1	Salinispora_arenicola_CNS-205	391037	1
GCF_000024925.1	Sanguibacter_keddieii_DSM_10542	446469	1
GCF_001042695.1	Scardovia_inopinata_JCM_12537	1150468	1
GCF_001262055.1	Schaalia_meyeri_W712	52773	3
GCF_000092825.1	Segniliparus_rotundus_DSM_44985	640132	1
GCF_001685415.1	Serinicoccus_JLT9	1758689	3
GCF_001577305.1	Sinomonas_atrocyanea_KCTC_3377	37927	1
GCF_000024545.1	Stackebrandtia_nassauensis_DSM_44728	446470	1
GCF_003258605.2	Streptacidiphilus_DSM_106435	2126346	2
GCF_000203835.1	Streptomyces_coelicolor_A3_2	100226	1
GCF_000010605.1	Streptomyces_griseus_sub_griseus_NBRC_13350	455632	1
GCF_000024865.1	Streptosporangium_roseum_DSM_43021	479432	1
GCF_001998865.1	Tessaracoccus_flavescens_SST-39T	399497	2
GCF_000012405.1	Thermobifida_fusca_YX	269800	1
GCF_000092645.1	Thermobispora_bispora_DSM_43833	469371	1
GCF_000024385.1	Thermomonospora_curvata_DSM_43183	471852	2
GCF_000007485.1	Tropheryma_whipplei_Twist	203267	0
GCF_000612055.1	Trueperella_pyogenes_TP6375	1661	2
GCF_000092225.1	Tsukamurella_paurometabola_DSM_20162	521096	1
GCF_000204155.1	Verrucosispora_maris_AB-18-032	263358	1
GCF_004135345.1	Xylanibacterium_2JSPR-7	2509459	1
GCF_004135385.1	Xylanimicrobium_FW10M-9	2509457	2
GCF_000024965.1	Xylanimonas_cellulosilytica_DSM_15894	446471	2
GCF_000478885.1	Adlercreutzia_equolifaciens_DSM_19450	1384484	2
GCF_000024225.1	Atopobium_parvulum_DSM_20469	521095	2
GCF_003856815.1	Collinsella_aerofaciens_C11	74426	2
GCF_000195315.1	Coriobacterium_glomerans_PW2	700015	2
GCF_000023845.1	Cryptobacterium_curtum_DSM_15641	469378	2
GCF_001643775.1	Denitrobacterium_detoxificans_NPOH1	79604	2
GCF_000024265.1	Eggerthella_lenta_DSM_2243	479437	2
GCF_000143845.1	Olsenella_uli_DSM_7084	633147	2
GCF_003966955.1	Parolsenella_catena_JCM_31932	2003188	2
GCF_900169485.1	Phoenicibacter_massiliensis_Marseille-P3241	1944646	1
GCF_000023885.1	Slackia_heliotrinireducens_DSM_20476	471855	2
GCF_003344865.1	Euzebya_DY32-46	1608957	1
GCF_000014185.1	Rubrobacter_xylanophilus_DSM_9941	266117	0
GCF_000025265.1	Conexibacter_woesei_DSM_14684	469383	1

AQUIFICAE [9/9 organisms 9 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000008625.1	Aquifex_aeolicus_VF5	224324	1
GCF_000191045.1	Desulfurobacterium_thermolithotrophum_DSM_11699	868864	1
GCF_000164905.1	Hydrogenobacter_thermophilus_TK-6	608538	1
GCF_000020785.1	Hydrogenobaculum_Y04AAS1	380749	1
GCF_000021565.1	Persephonella_marina_EX-H1	123214	1
GCF_000021545.1	Sulfurihydrogenibium_azorense_Az-Fu1	204536	1
GCF_000025605.1	Thermocrinis_albus_DSM_14484	638303	1
GCF_001547735.1	Thermosulfidibacter_takaii_ABI70S6	1298851	1
GCF_000185805.1	Thermovibrio_ammonificans_HB-1	648996	1

BACTEROIDETES [99/107 organisms 136 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000024845.1	Rhodothermus_marinus_DSM_4252	518766	1
GCF_000090405.2	Salinibacter_ruber_M8	761659	0
GCF_000265365.1	Alistipes_finegoldii_DSM_17242	679935	2
GCF_002201795.1	Alkalitalea_saponilacus_SCBZ-SP2	889453	1
GCF_000011065.1	Bacteroides_thetaiotaomicron_VPI-5482	226186	1
GCF_000512915.1	Barnesiella_viscericola_DSM_18177_C46_DSM_18177	880074	2
GCF_003991565.1	Butyricimonas_faecalis_H184	2093856	1
GCF_000010645.1	Candidatus_Azobacteroides_pseudotrichonymphae_genomovar._CFP2	511995	0
GCF_000626635.1	Draconibacterium_orientale_FH5	1168034	1
GCF_000953535.1	Fermentimonas_caenicola	1562970	1
GCF_000723505.1	Mucinivorans_hirudinis	1433126	2
GCF_001688845.2	Muribaculum_intestinale_YL27	1796646	2
GCF_000190535.1	Odoribacter_splanchnicus_DSM_20712_DSM_220712	709991	2
GCF_000183135.1	Paludibacter_propionicigenes_WB4	694427	1
GCF_000012845.1	Parabacteroides_distasonis_ATCC_8503	435591	2
GCF_900095795.1	Petrimonas_mucosa	1642646	1
GCF_000007585.1	Porphyromonas_gingivalis_W83	242619	1
GCF_000025925.1	Prevotella_ruminicola_23_Bryant_23	264731	1
GCF_900095135.1	Proteiniphilum_saccharofermentans	1642647	1
GCF_001443605.1	Salinivirga_cyanobacteriivorans_L21-Spi-D4	1307839	1
GCF_000238215.1	Tannerella_forsythia_92A2	203275	2
GCF_003600625.1	Arachidicoccus_KIS59-12	2341117	1
GCF_000024005.1	Chitinophaga_pinensis_DSM_2588	485918	1
GCF_002355595.1	Filimonas_lacunae_NBRC_104114	477680	1
GCF_001644645.1	Flavisolibacter_tropicus_LCS9	1492898	1
GCF_000243115.2	Niabella_soli_DSM_19437_JS13-8	929713	1
GCF_000246855.1	Niastella_koreensis_GR20-10	700598	1
GCF_003555545.1	Pseudoflavitalea_5GH32-13	2315862	1
GCF_001593605.1	Algoriphagus_M8-2	1727163	1
GCF_003258705.1	Arcticibacterium_luteifluviistationis_SM1504	1784714	2
GCF_000265405.1	Belliella_baltica_DSM_15883	866536	2
GCF_000265505.1	Bernardetia_litoralis_DSM_6794	880071	2
GCF_000020565.1	Candidatus_Amoebophilus_asiaticus_5a2	452471	1
GCF_000304455.1	Cardinium_endosymbiont_cEper1_of_Encarsia_pergandiella	1231626	0
GCF_003589925.1	Chryseolinea_KIS68-18	2321403	2
GCF_000222485.1	Cyclobacterium_marinum_DSM_745	880070	2
GCF_000014145.1	Cytophaga_hutchinsonii_ATCC_33406	269798	2
GCF_000023125.1	Dyadobacter_fermentans_DSM_18053	471854	1
GCF_000325705.1	Echinicola_vietnamensis_DSM_17526	926556	1
GCA_000263195.1	Emticicia_oligotrophica_DSM_17448	929562	1
GCF_002108455.1	Fibrella_ES10-3-2-2	1834519	3
GCF_001682195.1	Flammeovirga_MY04	1191459	2
GCF_000576555.1	Hymenobacter_swuensis_DY53	1227739	2
GCF_000166395.1	Leadbetterella_byssophila_DSM_17132	649349	1
GCF_000183425.1	Marivirga_tractuosa_DSM_4126	643867	1
GCF_001308105.1	Persicobacter_JZB09	1085624	1
GCF_000973725.1	Pontibacter_korlensis_X14-1T	400092	2
GCF_003143535.1	Pseudarcicella_HME7025	2183547	2
GCF_001310085.1	Rufibacter_tibetensis_1351	512763	2
GCA_000218895.1	Runella_slithyformis_DSM_19594	761193	2
GCA_000024525.1	Spirosoma_linguale_DSM_74	504472	1
GCF_000265385.1	Aequorivita_sublithincola_DSM_14238	746697	1
GCF_001310225.1	Algibacter_alginicilyticus_HZ22	1736674	1
GCF_004014855.1	Apibacter_HY041	2500547	1
GCF_003443715.1	Aquimarina_AD10	1714849	1
GCF_002234495.1	Arenibacter_algicola_SMS7	616991	2
GCF_002966125.1	Aureitalea_RR4-38	2094025	1
GCF_000022605.2	Blattabacterium_Blattella_germanica_Bge	331104	0
GCF_001447915.1	Candidatus_Sulcia_muelleri_PUNC	336810	0
GCF_000331975.1	Candidatus_Uzinura_diaspidicola_ASNER	1133592	0
GCF_000709555.1	Candidatus_Walczuchella_monophlebidarum	1415657	0
GCF_000220625.1	Capnocytophaga_canimorsus_Cc5	860228	1
GCF_000186265.1	Cellulophaga_algicola_DSM_14237	688270	2
GCF_002025665.1	Chryseobacterium_indologenes_AA5	253	2
GCF_003860565.1	Cloacibacterium_normanense_NRS-1	237258	1
GCF_000196315.1	Croceibacter_atlanticus_HTCC2559	216432	1
GCF_000212355.1	Dokdonia_4H-3-7-5	983548	2
GCF_000495935.2	Elizabethkingia_anophelis_NUHP1	1338011	2
GCF_003687485.1	Euzebyella_marina_RN62	1761453	1
GCF_003269425.1	Flagellimonas_HME9304	1383885	1
GCF_002886045.1	Flavivirga_eckloniae_ECD14	1803846	1
GCF_000016645.1	Flavobacterium_johnsoniae_UW101_ATCC_17061	376686	1
GCF_000194605.1	Fluviicola_taffensis_DSM_16823	755732	1
GCF_000060345.1	Gramella_forsetii_KT0803	411154	1
GCF_002369955.1	Ichthyobacterium_seriolicida_JBKA-6	242600	0
GCF_003352465.1	Kordia_SMS9	2282170	2
GCF_000211855.2	Lacinutrix_5H-3-7-4	983544	1
GCF_001543325.1	Lutibacter_profundi_LP1	1622118	1
GCF_002269385.1	Maribacter_cobaltidurans_B1	1178778	2
GCF_003425985.1	Mariniflexile_TRM1-10	2027857	1
GCF_000224085.1	Muricauda_ruestringensis_DSM_13258	886377	1
GCF_004139715.1	Muriicola_MMS17-SY002	2507538	2
GCF_000833025.1	Myroides_profundi_D25	480520	1
GCF_000332115.1	Nonlabens_dokdonensis_DSW-6	592029	1
GCF_002831645.1	Olleya_Bg11-27	2058135	2
GCF_000265465.1	Ornithobacterium_rhinotracheale_DSM_15997	867902	1
GCF_000236705.1	Owenweeksia_hongkongensis_DSM_17368	926562	1
GCF_000152945.2	Polaribacter_MED152	313598	2
GCF_000153485.2	Psychroflexus_torquis_ATCC_700755	313595	2
GCF_000295655.1	Riemerella_anatipestifer_RA-CH-1	1228997	1
GCF_000024125.1	Robiginitalea_biformata_HTCC2501	313596	2
GCF_001430825.1	Sediminicola_YIK13	1453352	1
GCF_001971785.1	Seonamhaeicola_S2-3	1936081	1
GCF_000941055.1	Siansivirga_zeaxanthinifaciens_CC-SAMT-1	1454006	1
GCF_002893765.1	Tamlana_UJ94	2069432	1
GCF_001483385.1	Tenacibaculum_dicentrarchi_AY7486TD	669041	1
GCF_000189415.1	Weeksella_virosa_DSM_16922	865938	1
GCF_001697185.1	Wenyingzhuangia_fucanilytica_CZ1127	1790137	1
GCF_000828715.1	Winogradskyella_PG-2	754409	1
GCF_000973105.1	Zobellia_galactanivorans_DsiJT	63186	1
GCF_000023465.1	Zunongwangia_profunda_SM-A87_SMA-87	655815	1
GCF_000212735.1	Haliscomenobacter_hydrossis_DSM_1100	760192	1
GCF_000250635.1	Saprospira_grandis_Lewin	984262	2
GCF_000023825.1	Pedobacter_heparinus_DSM_2366	485917	2
GCF_000190735.1	Pseudopedobacter_saltans_DSM_12145	762903	2
GCF_000242635.2	Solitalea_canadensis_DSM_3403	929556	2
GCF_000192845.1	Sphingobacterium_21	743722	1

CHLAMYDIAE [6/6 organisms 11 genes]

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Assembly	Genome	TaxID	No. genes
GCF_001499655.1	Candidatus Protochlamydia naegleriophila	389348	3
GCF_000008745.1	Chlamydia_pneumoniae_CWL029	115713	1
GCF_000008725.1	Chlamydia_trachomatis_DUW-3CX	272561	1
GCF_000253035.1	Parachlamydia_acanthamoebae_UV-7	765952	2
GCF_000237205.1	Simkania_negevensis_Z	331113	2
GCF_000092785.1	Waddlia_chondrophila_WSU_86-1044	716544	2

CHLOROBI [5/5 organisms 9 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000006985.1	Chlorobaculum_tepidum_TLS	194439	2
GCF_000015125.1	Chlorobium_phaeobacteroides_DSM_266	290317	2
GCF_000020525.1	Chloroherpeton_thalassium_ATCC_35110	517418	1
GCF_000020645.1	Pelodictyon_phaeoclathratiforme_BU-1	324925	2
GCF_000020625.1	Prosthecochloris_aestuarii_DSM_271	290512	2

CHLOROFLEXI [12/14 organisms 17 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000199675.1	Anaerolinea_thermophila_UNI-1	926569	1
GCF_001717545.1	Anaerolineaceae_bacterium_oral_taxon_439_W11661	1889813	1
GCF_900184705.1	Brevefilum_fermentans	1986204	1
GCF_003966975.1	Pelolinea_submarina_MO-CFX1	913107	1
GCF_900066015.1	Candidatus_Promineofilum_breve_Cfx-K	1806508	2
GCF_000281175.1	Caldilinea_aerophila_DSM_14535_NBRC_104270	926550	0
GCF_000021945.1	Chloroflexus_aggregans_DSM_9485	326427	2
GCA_000018565.1	Herpetosiphon_aurantiacus_DSM_785	316274	1
GCF_000016665.1	Roseiflexus_RS-1	357808	2
GCF_000011905.1	Dehalococcoides_mccartyi_195	243164	1
GCF_000143165.1	Dehalogenimonas_lykanthroporepellens_BL-DC-9	552811	0
GCF_004208415.1	Ktedonobacterales_bacterium_SCAWS-G2	2509675	3
GCF_000024985.1	Sphaerobacter_thermophilus_DSM_20745	479434	1
GCF_000021685.1	Thermomicrobium_roseum_DSM_5159	309801	1

CYANOBACTERIA [40/41 organisms 45 genes]

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Assembly	Genome	TaxID	No. genes
GCA_001765415.1	Candidatus_Melainabacteria_bacterium_MEL.A1	1899017	1
GCF_000018105.1	Acaryochloris_marina_MBIC11017	329726	1
GCF_000317695.1	Anabaena_cylindrica_PCC_7122	272123	1
GCF_000316575.1	Calothrix_PCC_7507	99598	2
GCF_000317125.1	Chroococcidiopsis_thermalis_PCC_7203	251229	1
GCF_000316515.1	Cyanobium_gracile_PCC_6307	292564	1
GCA_000317535.1	Cylindrospermum_stagnale_PCC_7417	56107	1
GCF_000317615.1	Dactylococcopsis_salina_PCC_8305	13035	2
GCF_001548455.1	Fischerella_NIES-3754	1752063	1
GCF_002075285.2	Halomicronema_hongdechloris_C2206	1641165	1
GCF_000316605.1	Leptolyngbya_PCC_7376	111781	1
GCF_003054475.1	Nodularia_spumigena_UHCC_0039	1914872	1
GCF_000020025.1	Nostoc_punctiforme_PCC_73102_ATCC_29133	63737	1
GCF_000009705.1	Nostoc_PCC_7120	103690	1
GCA_003609755.1	Planktothrix_agardhii_NIES-204	282423	1
GCF_000317025.1	Pleurocapsa_PCC_7327	118163	1
GCF_000011485.1	Prochlorococcus_marinus_MIT_9313_MIT9313	74547	1
GCF_000007925.1	Prochlorococcus_marinus_sub_marinus_CCMP1375_SS120	167539	1
GCF_000317065.1	Pseudanabaena_PCC_7367	82654	1
GCF_000316665.1	Rivularia_PCC_7116	373994	1
GCF_000317575.1	Stanieria_cyanosphaera_PCC_7437	111780	2
GCF_000012525.1	Synechococcus_elongatus_PCC_7942	1140	1
GCF_000009725.1	Synechocystis_PCC_6803	1148	1
GCF_000011345.1	Thermosynechococcus_elongatus_BP-1	197221	1
GCF_000204075.1	Trichormus_variabilis_ATCC_29413	240292	1
GCF_000011385.1	Gloeobacter_violaceus_PCC_7421	251221	1
GCF_003060805.1	Arthrospira_TJSD092	2153484	1
GCF_000025125.1	Candidatus_Atelocyanobacterium_thalassa_isolate_ALOHA	1453429	0
GCA_000317145.1	Chamaesiphon_minutus_PCC_6605	1173020	1
GCF_002368355.1	Chondrocystis_NIES-4102	2005460	1
GCF_000317495.1	Crinalium_epipsammum_PCC_9333	1173022	1
GCF_000317675.1	Cyanobacterium_aponinum_PCC_10605	755178	1
GCF_000147335.1	Cyanothece_PCC_7822	497965	1
GCF_000317045.1	Geitlerinema_PCC_7407	1173025	1
GCF_000317555.1	Gloeocapsa_PCC_7428	1173026	1
GCF_000317635.1	Halothece_PCC_7418	65093	2
GCF_000317515.1	Microcoleus_PCC_7113	1173027	1
GCF_000010625.1	Microcystis_aeruginosa_NIES-843	449447	1
GCF_001767235.1	Moorea_producens_PAL-8-15-08-1	1458985	2
GCF_000317475.1	Oscillatoria_nigro-viridis_PCC_7112	179408	1
GCF_000014265.1	Trichodesmium_erythraeum_IMS101	203124	1

DEFERRIBACTERES [5/5 organisms 5 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000183405.1	Calditerrivibrio_nitroreducens_DSM_19672	768670	1
GCF_000010985.1	Deferribacter_desulfuricans_SSM1	639282	1
GCF_000025725.1	Denitrovibrio_acetiphilus_DSM_12809	522772	1
GCF_000218625.1	Flexistipes_sinusarabici_DSM_4947	717231	1
GCF_004087915.1	Geovibrio_thiophilus_DSM_11263	139438	1

DEINOCOCCUS-THERMUS [6/6 organisms 6 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000008565.1	Deinococcus_radiodurans_R1	243230	1
GCF_000195335.1	Marinithermus_hydrothermalis_DSM_14884	869210	1
GCF_000092125.1	Meiothermus_silvanus_DSM_9946	526227	1
GCF_000183745.1	Oceanithermus_profundus_DSM_14977	670487	1
GCF_000091545.1	Thermus_thermophilus_HB8	300852	1
GCF_000092425.1	Truepera_radiovictrix_DSM_17093	649638	1

FIRMICUTES

BACILLI [73/73 organisms 128 genes]

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Assembly	Genome	TaxID	No. genes
GCF_002243625.1	Aeribacillus_pallidus_KCTC3564	33936	2
GCF_003546865.1	Aerococcaceae_bacterium_ZY16052	2036206	2
GCF_000193205.1	Aerococcus_urinae_ACS-120-V-Col10a	866775	2
GCF_000219875.1	Alicyclobacillus_acidocaldarius_sub_acidocaldarius_Tc-4-1	1048834	1
GCF_000307165.1	Amphibacillus_xylanus_NBRC_15112	698758	2
GCF_002355375.1	Aneurinibacillus_soli_CB4	1500254	2
GCF_000019045.1	Anoxybacillus_flavithermus_WK1	491915	2
GCF_001989575.1	Auricoccus_indicus_S31	1849491	2
GCF_000007845.1	Bacillus_anthracis_Ames	198094	2
GCF_000007825.1	Bacillus_cereus_ATCC_14579	226900	1
GCF_000011145.1	Bacillus_halodurans_C-125	272558	2
GCF_000008425.1	Bacillus_licheniformis_DSM_13_ATCC_14580	279010	3
GCF_000009045.1	Bacillus_subtilis_sub_subtilis_168	224308	2
GCF_000338755.1	Bacillus_thuringiensis_serovar_kurstaki_HD73	1279365	2
GCF_000010165.1	Brevibacillus_brevis_NBRC_100599_NBRC_100599_47	358681	2
GCF_002381265.1	Brochothrix_thermosphacta_BI	2756	2
GCF_000317975.2	Carnobacterium_maltaromaticum_LMA28	1234679	1
GCF_003713065.1	Cohnella_18JY8-7	2480923	1
GCF_000007785.1	Enterococcus_faecalis_V583	226185	2
GCF_000496635.1	Exiguobacterium_MH3	1399115	1
GCF_001629705.1	Fictibacillus_phosphorivorans_G25-29	1221500	2
GCF_900638055.1	Gemella_haemolysans_NCTC10459	1379	2
GCF_000009785.1	Geobacillus_kaustophilus_HTA426	235909	3
GCF_000284515.1	Halobacillus_halophilus_DSM_2266_type_strain_DSM_2266	866895	1
GCF_002005405.1	Jeotgalibaca_dankookensis_EX-07	708126	2
GCF_000818095.1	Jeotgalibacillus_malaysiensis_D5	1508404	2
GCF_900637935.1	Kurthia_zopfii_NCTC404	1650	2
GCF_000092905.1	Kyrpidia_tusciae_DSM_2912	562970	1
GCF_002893785.1	Laceyella_sacchari_FBKL4.010	37482	2
GCF_000011985.1	Lactobacillus_acidophilus_NCFM	272621	2
GCF_000338115.2	Lactobacillus_plantarum_ZJ316	1284663	2
GCF_000016825.1	Lactobacillus_reuteri_DSM_20016	557436	2
GCF_000011045.1	Lactobacillus_rhamnosus_GG_ATCC_53103	568703	2
GCF_000006865.1	Lactococcus_lactis_sub_lactis_Il1403_IL1403	1358	2
GCF_001307805.1	Lentibacillus_amyloliquefaciens_LAM0015	1472767	1
GCF_000092505.1	Leuconostoc_kimchii_IMSNU_11154	762051	3
GCF_000195795.1	Listeria_innocua_Clip11262	272626	2
GCF_000196035.1	Listeria_monocytogenes_EGD-e	169963	2
GCF_002982115.1	Lysinibacillus_sphaericus_DSM_28	1421	2
GCF_000010585.1	Macrococcus_caseolyticus_JCSC5402	458233	2
GCF_001895285.1	Marinilactibacillus_15R	1911586	1
GCF_000747585.1	Melissococcus_plutonius_S1	1385937	1
GCF_002005165.1	Novibacillus_thermophilus_SG-1	1471761	1
GCF_000011245.1	Oceanobacillus_iheyensis_HTE831	221109	1
GCF_000014385.1	Oenococcus_oeni_PSU-1	203123	1
GCF_000164985.3	Paenibacillus_polymyxa_SC2	886882	1
GCF_003595195.1	Paenisporosarcina_K2R23-3	2320858	2
GCF_001700985.1	Parageobacillus_thermoglucosidasius_NCIMB_11955	1426	2
GCF_003268595.1	Paraliobacillus_X-1125	2213194	1
GCF_000237995.1	Pediococcus_claussenii_ATCC_BAA-344	701521	2
GCF_001687565.2	Planococcus_antarcticus_DSM_14505	1185653	2
GCF_001617605.1	Rummeliibacillus_stabekisii_PP9	241244	2
GCF_001685435.2	Salimicrobium_jeotgali_MJ3	1230341	2
GCF_001005905.1	Salinicoccus_halodurans_H3B36	407035	2
GCF_000271325.1	Solibacillus_silvestris_StLB046	1002809	2
GCF_004014985.1	Sporolactobacillus_terrae_DRG1	269673	2
GCF_001590685.1	Sporosarcina_psychrophila_DSM_6497	1476	1
GCF_000009645.1	Staphylococcus_aureus_sub_aureus_N315	158879	1
GCF_000007645.1	Staphylococcus_epidermidis_ATCC_12228	176280	1
GCF_000009865.1	Staphylococcus_haemolyticus_JCSC1435	279808	1
GCF_000007265.1	Streptococcus_agalactiae_2603VR	208435	2
GCF_000271865.1	Streptococcus_mutans_GS-5	1198676	2
GCF_000006885.1	Streptococcus_pneumoniae_TIGR4_ATCC_BAA-334	170187	2
GCF_000006785.2	Streptococcus_pyogenes_M1_GAS_SF370	160490	2
GCF_000253395.1	Streptococcus_thermophilus_JIM_8232	1051074	2
GCF_000725365.1	Terribacillus_goriensis_MP602	386490	2
GCF_000283615.1	Tetragenococcus_halophilus_NBRC_12172	945021	1
GCF_000227705.2	Thermobacillus_composti_KWC4	717605	2
GCF_002162355.1	Tumebacillus_avium_AR23208	1903704	2
GCF_002370195.2	Ureibacillus_thermosphaericus_A1	51173	2
GCF_001998885.1	Vagococcus_penaei_CD276	633807	1
GCF_003667805.1	Virgibacillus_halodenitrificans_Bac324	1482	1
GCF_000219805.1	Weissella_koreensis_KACC_15510	1045854	3

CLOSTRIDIA [79/79 organisms 127 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000020605.1	Eubacterium_rectale_ATCC_33656	515619	3
GCF_000196455.1	Acetoanaerobium_sticklandii_DSM_519	1511	2
GCF_000247605.1	Acetobacterium_woodii_DSM_1030	931626	2
GCF_000144695.1	Acetohalobium_arabaticum_DSM_5501	574087	1
GCF_000016985.1	Alkaliphilus_metalliredigens_QYMF	293826	2
GCF_004103735.1	Aminipila_JN-39	2507160	2
GCF_000024605.1	Ammonifex_degensii_KC4	429009	1
GCF_001998765.1	Anaerostipes_hadrus_BPB5	649756	2
GCF_001561955.1	Anaerotignum_propionicum_DSM_1682_X2	991789	2
GCF_003991135.1	Anoxybacter_fermentans_DY22613	1323375	1
GCF_002222595.2	Blautia_hansenii_DSM_20583	537007	2
GCF_000145035.1	Butyrivibrio_proteoclasticus_B316	515622	3
GCF_000007085.1	Caldanaerobacter_subterraneus_sub_tengcongensis_MB4	273068	2
GCF_000016545.1	Caldicellulosiruptor_saccharolyticus_DSM_8903	351627	1
GCF_000270205.1	Candidatus_Arthromitus_SFB-mouse-Japan	1029718	2
GCF_000018425.1	Candidatus_Desulforudis_audaxviator_MP104C	477974	1
GCF_004103755.1	Caproiciproducens_NJN-50	2507162	1
GCF_003054495.1	Carboxydocella_thermautotrophica_41	178899	1
GCF_000012865.1	Carboxydothermus_hydrogenoformans_Z-2901	246194	1
GCF_000178835.2	Cellulosilyticum_lentocellum_DSM_5427	642492	2
GCF_003628755.1	Christensenella_minuta_DSM_22607	626937	1
GCF_000009205.2	Clostridioides_difficile_630	272563	2
GCF_000008765.1	Clostridium_acetobutylicum_ATCC_824	272562	2
GCF_000063585.1	Clostridium_botulinum_A_ATCC_3502	413999	2
GCF_000013285.1	Clostridium_perfringens_ATCC_13124	195103	2
GCF_000007625.1	Clostridium_tetani_E88_Massachusetts_sub_E88	212717	2
GCF_000305815.1	Dehalobacter_CF	1131462	1
GCF_002224645.1	Dehalobacterium_formicoaceticum_DMC	51515	1
GCF_000233715.2	Desulfallas_gibsoniae_DSM_7213	767817	4
GCF_000010045.1	Desulfitobacterium_hafniense_Y51	138119	1
GCF_000024205.1	Desulfofarcimen_acetoxidans_DSM_771	485916	1
GCA_000214705.1	Desulfofundulus_kuznetsovii_DSM_6115	760568	2
GCF_000235605.1	Desulfosporosinus_orientis_DSM_765	768706	1
GCF_000215085.1	Desulfotomaculum_ruminis_DSM_2154	696281	1
GCF_000178115.2	Ethanoligenens_harbinense_YUAN-3	663278	1
GCF_000152245.2	Eubacterium_callanderi_KIST612	53442	2
GCF_002734145.1	Faecalibacterium_prausnitzii_A2165	718252	2
GCF_002998295.1	Fastidiosipila_sanguinis_CCUG_47711	236753	2
GCF_000163895.2	Filifactor_alocis_ATCC_35896	546269	2
GCF_001688625.2	Flavonifractor_plautii_YL31	292800	2
GCF_001750685.1	Geosporobacter_ferrireducens_IRF9	1424294	2
GCF_000166415.1	Halanaerobium_hydrogeniformans	656519	2
GCF_000328625.1	Halobacteroides_halobius_DSM_5150	748449	1
GCF_003953885.1	Halocella_SP3-1	2382161	2
GCF_000020485.1	Halothermothrix_orenii_H_168_DSM_9562	373903	1
GCF_000019165.1	Heliobacterium_modesticaldum_Ice1_ATCC_51547	498761	1
GCF_900070325.1	Herbinix_luporum_SD1D	1679721	2
GCF_000015865.1	Hungateiclostridium_thermocellum_ATCC_27405	203119	1
GCF_001454945.1	Intestinimonas_butyriciproducens_AF211	1297617	1
GCF_003589745.1	Lachnoanaerobaculum_umeaense_DSM_23576_CCUG_58757	617123	3
GCF_000018685.1	Lachnoclostridium_phytofermentans_ISDg	357809	3
GCF_000025225.2	Mageeibacillus_indolicus_UPII9-5	699246	1
GCF_000213255.1	Mahella_australiensis_50-1_BON	697281	1
GCF_002998925.1	Mogibacterium_diversum_CCUG_47132	114527	1
GCF_000013105.1	Moorella_thermoacetica_ATCC_39073	264732	2
GCF_900312975.1	Mordavella_Marseille-P3756	2086584	2
GCF_000020005.1	Natranaerobius_thermophilus_JWNM-WN-LF	457570	1
GCF_000283575.1	Oscillibacter_valericigenes_Sjm18-20	693746	1
GCF_002865995.1	Paeniclostridium_sordellii_AM370	1505	2
GCA_000010565.1	Pelotomaculum_thermopropionicum_SI	370438	1
GCF_000597865.1	Peptoclostridium_acidaminophilum_DSM_3953	1286171	2
GCF_002896855.1	Pseudoclostridium_thermosuccinogenes_DSM_5807	84032	1
GCF_000225345.1	Roseburia_hominis_A2-183	585394	3
GCF_000022065.1	Ruminiclostridium_cellulolyticum_H10_ATCC_35319	394503	1
GCF_000179635.2	Ruminococcus_albus_7_DSM_20455	697329	3
GCA_000219855.1	Sulfobacillus_acidophilus_TPY	1051632	1
GCF_000009905.1	Symbiobacterium_thermophilum_IAM_14863_IAM14863	292459	1
GCF_000190635.1	Syntrophobotulus_glycolicus_DSM_8271	645991	1
GCF_000014725.1	Syntrophomonas_wolfei_sub_wolfei_Goettingen_G311	335541	1
GCF_000092405.1	Syntrophothermus_lipocalidus_DSM_12680	643648	1
GCF_000213235.1	Tepidanaerobacter_acetatoxydans_Re1	1209989	2
GCF_000305935.1	Thermacetogenium_phaeum_DSM_12270	1089553	2
GCF_000184705.1	Thermaerobacter_marianensis_DSM_12885	644966	1
GCF_000092945.1	Thermincola_potens_JR	635013	1
GCF_000025645.1	Thermoanaerobacter_italicus_Ab9	580331	2
GCF_000328545.1	Thermoanaerobacterium_thermosaccharolyticum_M0795	698948	2
GCF_000331995.1	Thermoclostridium_stercorarium_sub_stercorarium_DSM_8532	1121335	1
GCF_000212395.1	Thermodesulfobium_narugense_DSM_14796	747365	1
GCF_000144645.1	Thermosediminibacter_oceani_DSM_16646	555079	1

NEGATIVICUTES [10/10 organisms 13 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000230275.1	Acidaminococcus_intestini_RyC-MR95	568816	1
GCF_900343095.1	Dialister_Marseille-P5638	2161821	1
GCF_900187035.1	Megamonas_hypermegale_NCTC10570	158847	1
GCF_003010495.1	Megasphaera_elsdenii_DSM_20460_ATCC_25940	1064535	1
GCF_003966895.1	Methylomusa_anaerophila_MMFC1	1930071	2
GCF_900155405.1	Negativicoccus_massiliensis_Marseille-P2082	1702287	1
GCF_000271665.2	Pelosinus_fermentans_JBW45	1192197	2
GCF_003945365.1	Phascolarctobacterium_faecium_JCM_30894	33025	1
GCF_000284095.1	Selenomonas_ruminantium_sub_lactilytica_TAM6421	927704	1
GCF_000024945.1	Veillonella_parvula_DSM_2008	479436	2

TISSIERELLIA [9/9 organisms 18 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000024105.1	Anaerococcus_prevotii_DSM_20548	525919	2
GCF_900120165.1	Ezakiella_massiliensis_Marseille-P2951	1852374	2
GCF_000010185.1	Finegoldia_magna_ATCC_29328	334413	2
GCF_000299355.1	Gottschalkia_acidurici_9a	1128398	2
GCF_900119705.1	Murdochiella_vaginalis_Marseille-P2341	1852373	2
GCF_000800295.1	Parvimonas_micra_KCOM_1535_ChDC_B708	33033	2
GCF_900638565.1	Peptoniphilus_harei_NCTC13077	54005	2
GCF_004101785.1	Soehngenia_W6	1582259	2
GCF_004103715.1	Sporanaerobacter_NJN-17	2507161	2

OTHER FIRMICUTES [4/4 organisms 7 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000270085.1	Erysipelothrix_rhusiopathiae_Fujisawa	650150	1
GCF_001543345.1	Turicibacter_H121	1712675	2
GCF_001544015.1	Limnochorda_pilosa_HC45	1555112	2
GCF_900120375.1	Ndongobacter_massiliensis_Marseille-P3170	1871025	2

FUSOBACTERIA [6/6 organisms 11 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000007325.1	Fusobacterium_nucleatum_sub_nucleatum_ATCC_25586	190304	1
GCF_000165505.1	Ilyobacter_polytropus_DSM_2926	572544	1
GCF_000023905.1	Leptotrichia_buccalis_C-1013-b_DSM_1135	523794	3
GCF_000024405.1	Sebaldella_termitidis_ATCC_33386	526218	2
GCF_000973085.1	Sneathia_amnii_SN35	187101	2
GCF_000024565.1	Streptobacillus_moniliformis_DSM_12112	519441	2

MOLLICUTES [3/14 organisms 9 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000018785.1	Acholeplasma_laidlawii_PG-8A	441768	4
GCF_000012225.1	Aster_yellows_witches-broom_phytoplasma_AYWB	322098	0
GCF_000582535.1	Candidatus_Hepatoplasma_crinochetorum_Av	1427984	0
GCF_000069925.1	Candidatus_Phytoplasma_australiense	59748	0
GCF_002803985.1	Entomoplasma_luminosum_PIMN-1	214888	0
GCF_000479355.1	Mesoplasma_florum_W37	1406864	0
GCF_000027325.1	Mycoplasma_genitalium_G37_G-37	243273	0
GCF_000027345.1	Mycoplasma_pneumoniae_M129	272634	0
GCF_000009845.1	Onion_yellows_phytoplasma_OY-M_onion_yellows	262768	0
GCF_000400935.1	Spiroplasma_chrysopicola_DF-1	1276227	0
GCF_000397185.1	Strawberry_lethal_yellows_phytoplasma_CPA_NZSb11	980422	0
GCF_000006625.1	Ureaplasma_parvum_serovar_3_ATCC_700970	273119	0
GCF_000755705.1	Candidatus_Izimaplasma_HR1	1541959	2
GCF_002838185.1	Tenericutes_bacterium_MO-XQ	1911684	3

PLANCTOMYCETES [1/14 organisms 2 genes]

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Assembly	Genome	TaxID	No. genes
GCF_900232105.1	Candidatus_Kuenenia_stuttgartiensis	174633	0
GCF_000284115.1	Phycisphaera_mikurensis_NBRC_102666	1142394	0
GCF_002117005.1	Sedimentisphaera_salicampi_ST-PulAB-D4	1941349	0
GCF_001983935.1	Fuerstia_marisgermanicae_NH11	1891926	0
GCF_003149495.1	Gemmata_obscuriglobus_DSM_5831	114	0
GCF_000186345.1	Isosphaera_pallida_ATCC_43644	575540	0
GCF_001956985.1	Paludisphaera_borealis_PX4	1387353	0
GCF_000025185.1	Pirellula_staleyi_DSM_6068	530564	0
GCF_001610835.1	Planctomyces_SH-PL14	1632864	0
GCF_000092105.1	Planctopirus_limnophila_DSM_3776	521674	0
GCF_000196115.1	Rhodopirellula_baltica_SH_1	243090	0
GCF_000165715.2	Rubinisphaera_brasiliensis_DSM_5305	756272	0
GCF_000242455.2	Singulisphaera_acidiphila_DSM_18658	886293	2
GCF_002277955.1	Thermogutta_terrifontis_R1	1331910	0

PROTEOBACTERIA

ALPHAPROTEOBACTERIA [135/158 organisms 140 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000010825.1	Acetobacter_pasteurianus_IFO_3283-01_IFO_3283_sub_IFO_3283-01	634452	1
GCF_000202835.1	Acidiphilium_multivorum_AIU301	926570	1
GCF_003352165.1	Acidisphaera_G45-3	1969806	0
GCF_000092025.1	Agrobacterium_fabrum_C58	176299	2
GCF_001008165.2	Altererythrobacter_atlanticus_26DY36	1267766	1
GCF_001605015.1	Aminobacter_aminovorans_KCTC_2477	83263	1
GCF_000013125.1	Anaplasma_phagocytophilum_HZ	212042	0
GCF_900149695.1	Anderseniella_Alg231-50	1922226	1
GCF_002237555.1	Antarctobacter_heliothermus_SMS3	74033	1
GCF_001547995.1	Asaia_bogorensis_NBRC_16594	1231624	1
GCF_000175215.2	Asticcacaulis_excentricus_CB_48	573065	1
GCF_001442755.1	Aureimonas_AU20	1349819	1
GCF_000010525.1	Azorhizobium_caulinodans_ORS_571	438753	1
GCF_001315015.1	Azospirillum_brasilense_Sp_7	192	1
GCF_000046685.1	Bartonella_quintana_Toulouse	283165	0
GCF_000019845.1	Beijerinckia_indica_sub_indica_ATCC_9039	395963	1
GCF_001402875.1	Blastochloris_viridis_ATCC_19567	1079	1
GCF_001713435.1	Blastomonas_RAC04	1842535	1
GCF_001741865.1	Bosea_vaviloviae_Vaf18	1526658	1
GCF_000284375.1	Bradyrhizobium_japonicum_USDA_6	1037409	1
GCF_003432385.1	Breoghania_L-A4	2304600	0
GCF_000144605.1	Brevundimonas_subvibrioides_ATCC_15264	633149	1
GCF_000007125.1	Brucella_melitensis_bv._1_16M	224914	1
GCF_000319385.1	Candidatus_Endolissoclinum_faulkneri_L2	1193729	0
GCF_000981545.1	Candidatus_Filomicrobium_marinum_Y	1608628	1
GCF_003072485.1	Candidatus_Fokinia_solitaria	1802984	0
GCF_002688585.1	Candidatus_Fonsibacter_ubiquis	1925548	0
GCA_000021505.1	Candidatus_Hodgkinia_cicadicola_Dsem	573234	0
GCF_000219355.1	Candidatus_Midichloria_mitochondrii_IricVA	696127	0
GCF_002117145.1	Candidatus_Nucleicultrix_amoebiphila_FS5	1414854	1
GCF_000742835.1	Candidatus_Paracaedibacter_acanthamoebae	91604	1
GCA_000743035.1	Candidatus_Paracaedimonas_acanthamoebae	244581	1
GCF_000195085.1	Candidatus_Pelagibacter_IMCC9063	1002672	0
GCF_003015145.1	Candidatus_Phycorickettsia_trachydisci	2115978	1
GCF_000024465.1	Candidatus_Puniceispirillum_marinum_IMCC1322	488538	1
GCA_002005325.1	Candidatus_Tokpelaia_hoelldoblerii	1902579	1
GCF_000006905.1	Caulobacter_vibrioides_CB15	190650	1
GCF_000819565.1	Celeribacter_indicus_P73	1208324	1
GCF_000014245.1	Chelativorans_BNC1	266779	1
GCF_001271345.1	Chelatococcus_CO-6	1702325	2
GCF_001304795.1	Citromicrobium_JL477	1634516	1
GCF_003691365.1	Commensalibacter_AMU001	2478912	0
GCF_001305615.1	Confluentimicrobium_EMB200-NS6	1609966	1
GCF_001661675.2	Croceicoccus_marinus_E4A9	450378	1
GCF_001620265.1	Defluviimonas_alba_cai42	1335048	1
GCF_001402915.1	Devosia_A16	1736675	1
GCF_000018145.1	Dinoroseobacter_shibae_DFL_12_DSM_16493	398580	1
GCF_000013145.1	Ehrlichia_chaffeensis_Arkansas	205920	0
GCF_000730245.1	endosymbiont_of_Acanthamoeba_UWC8	86106	0
GCF_000697965.2	Ensifer_adhaerens_Casida_A	106592	1
GCF_000376545.2	Epibacterium_mobile_F1926	1265309	1
GCF_000013005.1	Erythrobacter_litoralis_HTCC2594	314225	1
GCF_003060865.1	Gemmobacter_HYN0069	2169400	1
GCF_000021325.1	Gluconacetobacter_diazotrophicus_PA1_5	272568	1
GCF_000311765.1	Gluconobacter_oxydans_H24	1224746	1
GCF_004000605.1	Glycocaulis_alkaliphilus_6B-8	1434191	1
GCF_000014285.2	Granulibacter_bethesdensis_CGDNIH1	391165	1
GCF_001611975.1	Haematospirillum_jordaniae_H5569	1549855	1
GCF_000812665.2	Halocynthiibacter_arcticus_PAMC_20958	1579316	1
GCF_900231165.1	Hartmannibacter_diazotrophicus_type_strain_E19	1482074	1
GCF_000023785.1	Hirschia_baltica_ATCC_49814	582402	0
GCF_000253295.1	Hyphomicrobium_MC1	717785	1
GCF_000013025.1	Hyphomonas_neptunium_ATCC_15444	228405	1
GCF_003568845.1	Indioceanicola_profundi_SCSIO_08040	2220096	2
GCF_000013565.1	Jannaschia_CCS1	290400	1
GCF_000164885.1	Ketogulonicigenium_vulgare_Y25	880591	1
GCF_000550765.1	Komagataeibacter_xylinus_E25	1296990	1
GCF_001787335.1	Kozakia_baliensis_DSM_14400	153496	0
GCF_001999245.1	Labrenzia_aggregata_RMAR6-6	187304	1
GCF_000511355.1	Leisingera_methylohalidivorans_DSM_14336_MB2	999552	1
GCF_000325745.1	Liberibacter_crescens_BT-1	1215343	0
GCF_000014865.1	Magnetococcus_marinus_MC-1	156889	1
GCF_000968135.1	Magnetospira_QH-2	1288970	1
GCF_000009985.1	Magnetospirillum_magneticum_AMB-1	342108	1
GCF_000014745.1	Maricaulis_maris_MCS10	394221	0
GCF_001046955.1	Marinovum_algicola_DG_898	988812	1
GCF_003433515.1	Maritalea_myrionectae_HL2708#5	454601	0
GCF_001908835.1	Marivivens_JLT3646	1920883	1
GCF_002043005.1	Martelella_mediterranea_DSM_17316_MACL11	1122214	1
GCF_000009625.1	Mesorhizobium_japonicum_MAFF_303099	266835	1
GCF_000022085.1	Methylobacterium_nodulans_ORS_2060	460265	1
GCF_000828475.1	Methyloceanibacter_caenitepidi_Gela4	1384459	1
GCF_000021745.1	Methylocella_silvestris_BL2	395965	1
GCF_000304315.1	Methylocystis_SC2	187303	1
GCF_000022685.1	Methylorubrum_extorquens_AM1	272630	1
GCF_002752655.1	Methylosinus_trichosporium_OB3b	595536	0
GCF_004135935.1	Methylovirgula_ligni_BW863	569860	1
GCF_000226315.1	Micavibrio_aeruginosavorus_ARL-13	856793	1
GCF_002741015.1	Microvirga_ossetica_V53M	1882682	1
GCF_002005465.1	Neoasaia_chiangmaiensis_NBRC_101099	320497	1
GCF_000731315.1	Neorhizobium_galegae_bv._orientalis_HAMBI_540	1028800	1
GCF_000013165.1	Neorickettsia_sennetsu_Miyayama	222891	0
GCF_003296175.1	Nitratireductor_OM-1	1756988	1
GCF_000013885.1	Nitrobacter_hamburgensis_X14	323097	1
GCF_000730165.1	Nitrospirillum_amazonense_CBAmc_CBAmC	1441467	1
GCF_002868735.1	Niveispirillum_cyanobacteriorum_TH16	1612173	1
GCF_001742225.1	Novosphingobium_resinovorum_SA1	158500	1
GCF_000017405.1	Ochrobactrum_anthropi_ATCC_49188	439375	1
GCF_000155735.2	Octadecabacter_arcticus_238	391616	1
GCF_000218565.1	Oligotropha_carboxidovorans_OM5	504832	1
GCF_000010205.1	Orientia_tsutsugamushi_Ikeda	334380	0
GCF_001484065.1	Pannonibacter_phragmitetus_31801	121719	1
GCF_000203895.1	Paracoccus_denitrificans_PD1222	318586	1
GCF_000284415.1	Pararhodospirillum_photometricum_DSM_122	1150469	1
GCF_002079945.1	Parasaccharibacter_apium_G7_7_3c	1510841	1
GCF_000017565.1	Parvibaculum_lavamentivorans_DS-1	402881	1
GCF_000152825.2	Parvularcula_bermudensis_HTCC2503	314260	1
GCF_001975705.1	Pelagibaca_abyssi_JLT2014	1250539	1
GCF_000230555.1	Pelagibacterium_halotolerans_B2	1082931	1
GCF_000511385.1	Phaeobacter_gallaeciensis_DSM_26640	1423144	1
GCF_000017265.1	Phenylobacterium_zucineum_HLK1	450851	1
GCF_003008515.1	Phreatobacter_cathodiphilus_S-12	1868589	1
GCF_002764115.1	Phyllobacterium_zundukense_Tri-48_RCAM_03910	1867719	1
GCA_000738435.1	Planktomarina_temperata_RCA23	666509	1
GCF_003966995.1	Pleomorphomonas_SM30	1885025	1
GCF_000192745.1	Polymorphum_gilvum_SL003B-26A1	991905	1
GCF_001663175.1	Porphyrobacter_neustonensis_DSM_9434	1112	1
GCF_002119765.1	Pseudorhodoplanes_sinuspersici_RIPI110	1235591	3
GCF_000009265.1	Rhizobium_leguminosarum_bv._viciae_3841	216596	1
GCF_002355275.1	Rhizorhabdus_dicambivorans_Ndbn-20	1850238	1
GCF_001870665.2	Rhodobaca_barguzinensis_alga05	441209	1
GCF_000021005.1	Rhodobacter_sphaeroides_KD131_KCTC_12085	557760	1
GCF_000166055.1	Rhodomicrobium_vannielii_ATCC_17100	648757	1
GCF_001579845.1	Rhodoplanes_Z2-YC6860	674703	1
GCF_000195775.1	Rhodopseudomonas_palustris_CGA009	258594	1
GCF_000013085.1	Rhodospirillum_rubrum_ATCC_11170	269796	1
GCF_001633165.1	Rhodovulum_sulfidophilum_DSM_1374	1188256	1
GCF_000195735.1	Rickettsia_prowazekii_Madrid_E	272947	0
GCF_000590925.1	Roseibacterium_elongatum_DSM_19469_DFL-43	1294273	1
GCF_000154785.2	Roseobacter_litoralis_Och_149	391595	1
GCF_001941945.1	Roseomonas_gilardii_U14-5	257708	1
GCF_002080415.1	Roseovarius_mucosus_SMR3	215743	1
GCF_000011965.2	Ruegeria_pomeroyi_DSS-3	246200	1
GCF_002814095.1	Sagittula_P11	2009329	1
GCF_001969385.1	Salipiger_profundus_JLT2016	1229727	1
GCF_004006175.1	Sedimentitalea_W43	2483033	1
GCF_001652565.1	Shinella_HZN7	879274	1
GCF_003970735.1	Silicimonas_algicola_KC90	1826607	1
GCF_000006965.1	Sinorhizobium_meliloti_1021	266834	1
GCF_000091125.1	Sphingobium_japonicum_UT26S	452662	1
GCF_000016765.1	Sphingomonas_wittichii_RW1	392499	1
GCF_000013985.1	Sphingopyxis_alaskensis_RB2256	317655	1
GCF_002218195.1	Sphingorhabdus_flavimaris_SMR4y	266812	1
GCF_003967095.1	Sphingosinicella_microcystinivorans_B9	335406	1
GCF_000092925.1	Starkeya_novella_DSM_506	639283	1
GCF_002222635.1	Sulfitobacter_pseudonitzschiae_SMR1	1402135	1
GCF_003940805.1	Tabrizicola_K13M18	2494374	1
GCF_001969365.1	Tateyamaria_omphalii_DOK1-4	299262	1
GCF_003008555.1	Thalassococcus_SH-1	2109625	1
GCF_000300235.2	Thalassospira_xiamenensis_M-5_DSM_17429	1123366	1
GCF_001940525.2	Thioclava_nitratireducens_25B10_4	1915078	1
GCF_000264455.2	Tistrella_mobilis_KA081020-065	1110502	1
GCF_002355335.1	Variibacter_gotjawalensis_GJW-30	1333996	1
GCF_000022285.1	Wolbachia_wRi	66084	0
GCF_000017645.1	Xanthobacter_autotrophicus_Py2	78245	1
GCF_001687105.1	Yangia_CCB-MM3	1792508	1
GCF_002158905.1	Yoonia_vestfoldensis_SMR4r	245188	1
GCF_000024245.1	Zymomonas_mobilis_sub_mobilis_NCIMB_11163	622759	1

BETAPROTEOBACTERIA [96/102 organisms 116 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000165835.1	Achromobacter_xylosoxidans_A8	762376	1
GCF_000176855.2	Acidovorax_avenae_sub_avenae_ATCC_19860	643561	1
GCF_000219915.2	Advenella_kashmirensis_WT001	1036672	1
GCF_000967305.2	Alcaligenes_faecalis_ZD02	511	1
GCF_000204645.1	Alicycliphilus_denitrificans_K601	596154	1
GCF_003100395.1	Aquabacterium_olei_NBRC_110486	1296669	1
GCF_002002905.1	Aquaspirillum_LM1	1938604	1
GCF_002217795.2	Aquitalea_magnusonii_H3	332411	1
GCF_000025965.1	Aromatoleum_aromaticum_EbN1	76114	2
GCF_000349945.1	Azoarcus_KH32C	748247	2
GCF_000236665.1	Azospira_oryzae_PS	640081	2
GCF_000743945.1	Basilea_psittacipulmonis_DSM_24701	1072685	1
GCF_000067205.1	Bordetella_petrii_DSM_12804	94624	1
GCF_003546465.1	Burkholderia_cepacia_ATCC_25416	983594	1
GCF_000024165.1	Candidatus_Accumulibacter_phosphatis_clade_IIA_UW-1	522306	1
GCF_000340795.1	Candidatus_Kinetoplastibacterium_desouzaii_TCC079E	1208919	1
GCF_000953015.1	Candidatus_Methylopumilus_turicensis_MMS-10A-171	1581680	1
GCF_000442605.1	Candidatus_Nasuia_deltocephalinicola_NAS-ALF	1343077	0
GCF_000441555.1	Candidatus_Profftella_armatura_DC	669502	0
GCF_000477435.1	Candidatus_Symbiobacter_mobilis_CR	946483	1
GCA_000412755.1	Candidatus_Tremblaya_phenacola_PAVE	1266371	0
GCA_003391315.1	Candidatus_Vidania_fulgoroideae_OLIH	881286	0
GCA_000147015.1	Candidatus_Zinderia_insecticola_CARI	871271	0
GCF_000612685.1	Castellaniella_defragrans_65Phen	1437824	2
GCF_000007705.1	Chromobacterium_violaceum_ATCC_12472	243365	1
GCF_000221045.1	Collimonas_fungivorans_Ter331	1005048	1
GCF_000093145.3	Comamonas_thiooxydans_CNB-1_sub_CNB-2	363952	1
GCF_000219215.1	Cupriavidus_necator_N-1	1042878	1
GCF_000012425.1	Dechloromonas_aromatica_RCB	159087	2
GCF_000018665.1	Delftia_acidovorans_SPH-1	398578	1
GCF_002214645.1	Diaphorobacter_polyhydroxybutyrativorans_SL-205	1546149	2
GCF_003990355.1	Eikenella_corrodens_KCOM_3110	539	2
GCF_000974685.2	Ferriphaselus_amnicola_OYT1	1188319	1
GCF_000145255.1	Gallionella_capsiferriformans_ES-2	395494	1
GCF_000143225.1	Herbaspirillum_seropedicae_SmR1	757424	1
GCF_000026125.1	Herminiimonas_arsenicoxydans	204773	1
GCF_000263795.2	Hydrogenophaga_PBC	795665	1
GCF_003339525.1	Hydromonas_F02	2268024	1
GCF_003952345.1	Iodobacter_H11R3	2496266	1
GCF_000013625.1	Janthinobacterium_Marseille	375286	1
GCF_001808185.1	Jeongeupia_USM3	1906741	1
GCF_900475905.1	Kingella_kingae_NCTC10529	504	2
GCF_000021025.1	Laribacter_hongkongensis_HLHK9	557598	1
GCF_900637555.1	Lautropia_mirabilis_NCTC12852	47671	2
GCF_000019785.1	Leptothrix_cholodnii_SP-6	395495	1
GCF_001412535.1	Limnohabitans_63ED37-2	1678128	1
GCF_001941825.1	Massilia_putida_6NM-7T	1141883	1
GCF_003008575.1	Melaminivora_SC2-9	2109913	1
GCF_000015725.1	Methylibium_petroleiphilum_PM1	420662	1
GCF_000013705.1	Methylobacillus_flagellatus_KT	265072	1
GCF_001183865.1	Methylophilus_TWE2	1662285	1
GCF_000093025.1	Methylotenera_versatilis_301	666681	1
GCF_001713355.1	Methyloversatilis_RAC08	1842540	1
GCF_000023745.1	Methylovorus_glucosetrophus_SIP3-4	582744	2
GCF_001653795.1	Mitsuaria_7	1658665	1
GCF_003966915.1	Mycoavidus_cysteinexigens_B1-EB	1553431	0
GCF_000006845.1	Neisseria_gonorrhoeae_FA_1090	242231	1
GCF_000008805.1	Neisseria_meningitidis_MC58	122586	1
GCF_000009145.1	Nitrosomonas_europaea_ATCC_19718	228410	1
GCF_000196355.1	Nitrosospira_multiformis_ATCC_25196	323848	1
GCF_002984485.1	Oligella_urethralis_FDAARGOS_329	90245	1
GCF_900089455.2	Orrella_dioscoreae	1851544	2
GCF_003008535.1	Ottowia_oryzae_KADR8-3	2109914	1
GCF_002127965.1	Oxalobacter_formigenes_HC-1	847	1
GCF_002005365.1	Paenalcaligenes_hominis_15S00501	643674	1
GCF_000590495.2	Pandoraea_pnomenusa_3kgm	1416914	1
GCF_000013645.1	Paraburkholderia_xenovorans_LB400	266265	1
GCF_001477625.1	Paucibacter_KCTC_42545	1768242	1
GCA_900475325.1	Paucimonas_lemoignei_NCTC10937	29443	2
GCF_003854895.1	Pigmentiphaga_H8	2488560	2
GCF_000013865.1	Polaromonas_JS666	296591	1
GCF_001017435.1	Polyangium_brachysporum_DSM_7029	413882	2
GCF_000016345.1	Polynucleobacter_asymbioticus_QLW-P1DMWA-1	312153	1
GCF_000283535.1	Pseudogulbenkiania_NH8B	748280	1
GCF_000209655.1	Pusillimonas_T7-7	1007105	1
GCF_000009125.1	Ralstonia_solanacearum_GMI1000	267608	1
GCF_000215705.1	Ramlibacter_tataouinensis_TTB310	365046	1
GCF_002116905.1	Rhizobacter_gummiphilus_NS21	946333	1
GCF_002863805.1	Rhodocyclaceae_bacterium_Thauera-like	1898103	2
GCF_000013605.1	Rhodoferax_ferrireducens_T118_DSM_15236	338969	1
GCF_001483865.1	Roseateles_depolymerans_KCTC_42856	76731	1
GCF_000284255.1	Rubrivivax_gelatinosus_IL144	983917	1
GCA_000934545.1	Rugosibacter_aromaticivorans_Ca6	1565605	1
GCF_000828895.1	Serpentinomonas_raichei_A1	1458425	1
GCF_000025705.1	Sideroxydans_lithotrophicus_ES-1	580332	1
GCF_002951835.1	Simonsiella_muelleri_ATCC_29453	641147	2
GCF_003008595.1	Simplicispira_suum_SC1-8	2109915	1
GCF_000600005.1	Snodgrassella_alvi_wkB2	1196094	2
GCF_000297055.2	Sulfuricella_denitrificans_skB26	1163617	1
GCF_002162035.1	Sulfuriferula_AH1	1985873	1
GCF_000828635.1	Sulfuritalea_hydrogenivorans_sk43H_DSM_22779	1223802	1
GCF_003967275.1	Sulfuritortus_calidifontis_J1A	1914471	1
GCF_003609995.1	Sutterella_megalosphaeroides_6FBBBH3	2494234	2
GCF_000185745.1	Taylorella_equigenitalis_MCE9	937774	1
GCF_000021765.1	Thauera_MZ1T	85643	2
GCF_000012745.1	Thiobacillus_denitrificans_ATCC_25259	292415	1
GCF_000092605.1	Thiomonas_intermedia_K12	426114	1
GCF_003955735.1	Undibacterium_parvum_DSM_23061	401471	1
GCF_000463015.1	Variovorax_paradoxus_B4	1246301	1
GCF_000015565.1	Verminephrobacter_eiseniae_EF01-2	391735	1
GCF_002222655.1	Vitreoscilla_filiformis_ATCC_15551	63	1
GCF_003054515.1	Zoogloeaceae_bacteirum_Par-f-2	2080469	2

DELTAPROTEOBACTERIA [36/39 organisms 55 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000022145.1	Anaeromyxobacter_dehalogenans_2CP-1	455488	1
GCF_001027285.1	Archangium_gephyra_DSM_2261	48	2
GCF_003258315.1	Bradymonas_sediminis_FA350	1548548	4
GCF_001189295.1	Chondromyces_crocatus_Cm_c5	52	2
GCF_000255295.1	Corallococcus_coralloides_DSM_2259	1144275	2
GCF_002305875.1	Cystobacter_fuscus_DSM_52655	43	1
GCF_000143965.1	Desulfarculus_baarsii_DSM_2075	644282	2
GCF_000021905.1	Desulfatibacillum_alkenivorans_AK-01	439235	2
GCF_000195295.1	Desulfobacca_acetoxidans_DSM_11109	880072	0
GCF_000020365.1	Desulfobacterium_autotrophicum_HRM2	177437	1
GCF_000307105.1	Desulfobacula_toluolica_Tol2	651182	1
GCF_002952055.1	Desulfobulbus_oralis_ORNL	1986146	1
GCF_000341395.1	Desulfocapsa_sulfexigens_DSM_10523	1167006	1
GCF_000018405.1	Desulfococcus_oleovorans_Hxd3	96561	2
GCF_000024325.1	Desulfohalobium_retbaense_DSM_5692	485915	1
GCF_000023225.1	Desulfomicrobium_baculatum_DSM_4028	525897	1
GCF_000266945.1	Desulfomonile_tiedjei_DSM_6799	706587	0
GCF_000025945.1	Desulfotalea_psychrophila_LSv54	177439	1
GCF_000195755.1	Desulfovibrio_vulgaris_Hildenborough	882	1
GCF_000517565.1	Desulfurella_acetivorans_A63	694431	1
GCF_000092205.1	Desulfurivibrio_alkaliphilus_AHT_2	589865	1
GCF_001278055.1	Desulfuromonas_soudanensis_WTL	1603606	2
GCF_000827125.1	Geoalkalibacter_subterraneus_Red1	483547	2
GCF_000012925.1	Geobacter_metallireducens_GS-15	269799	2
GCF_000024805.1	Haliangium_ochraceum_DSM_14365	502025	2
GCF_000194135.1	Hippea_maritima_DSM_10411	760142	0
GCA_001263205.1	Labilithrix_luteola_DSM_27648	1391654	2
GCF_000331715.1	Lawsonia_intracellularis_N343	1234378	1
GCF_002305855.1	Melittangium_boletus_DSM_14713	1294270	1
GCA_001931535.1	Minicystis_rosea_DSM_24000	888845	2
GCF_000012685.1	Myxococcus_xanthus_DK_1622	246197	1
GCF_000015045.1	Pelobacter_propionicus_DSM_2379	338966	2
GCF_000176915.2	Pseudodesulfovibrio_aespoeensis_Aspo-2	643562	1
GCF_000737325.1	Sandaracinus_amylolyticus_DSM_53668	927083	3
GCF_000067165.1	Sorangium_cellulosum_So_ce56_So_ce_56	448385	2
GCF_000165485.1	Stigmatella_aurantiaca_DW43-1	378806	1
GCF_000014965.1	Syntrophobacter_fumaroxidans_MPOB	335543	1
GCF_000013405.1	Syntrophus_aciditrophicus_SB	56780	1
GCF_001263175.1	Vulgatibacter_incomptus_DSM_27710	1391653	1

EPSILONPROTEOBACTERIA [11/12 organisms 14 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000092245.1	Arcobacter_nitrofigilis_DSM_7299	572480	1
GCF_000009085.1	Campylobacter_jejuni_sub_jejuni_NCTC_11168_ATCC_700819	32022	1
GCF_000008525.1	Helicobacter_pylori_26695	85962	0
GCA_003945285.1	Hydrogenimonas	2231112	1
GCF_000021725.1	Nautilia_profundicola_AmH	598659	1
GCF_000186245.1	Nitratifractor_salsuginis_DSM_16511	749222	1
GCF_000010325.1	Nitratiruptor_SB155-2	387092	1
GCF_000183725.1	Sulfuricurvum_kujiense_DSM_16994	709032	2
GCF_000147355.1	Sulfurimonas_autotrophica_DSM_16294	563040	1
GCF_000265295.1	Sulfurospirillum_barnesii_SES-3	760154	1
GCF_000010345.1	Sulfurovum_NBC37-1	387093	1
GCF_000196135.1	Wolinella_succinogenes_DSM_1740_DSMZ_1740	273121	3

GAMMAPROTEOBACTERIA [199/224 organisms 407 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000007945.1	Haemophilus_ducreyi_35000HP	233412	3
GCF_000007745.1	Mannheimia_succiniciproducens_MBEL55E	221988	3
GCF_003184265.1	Acidiferrobacter_SPIII_3	1281578	1
GCF_001753245.1	Acidihalobacter_prosperus_F5	160660	1
GCF_001593425.2	Acinetobacter_baumannii_ATCC_17978	470	2
GCF_000739435.1	Actinobacillus_suis_ATCC_33415	743972	3
GCF_000196395.1	Aeromonas_salmonicida_sub_salmonicida_A449	382245	3
GCF_002157225.2	Agarilytica_rhodophyticola_017	1737490	2
GCF_001420915.1	Agarivorans_gilvus_WH0801	680279	2
GCF_000163615.3	Aggregatibacter_actinomycetemcomitans_D7S-1	694569	3
GCF_003015185.1	Ahniella_affigens_D13	2021234	1
GCF_000009365.1	Alcanivorax_borkumensis_SK2	393595	1
GCF_000011805.1	Aliivibrio_fischeri_ES114	312309	2
GCF_000014785.1	Alkalilimnicola_ehrlichii_MLHE-1	187272	1
GCF_000025485.1	Allochromatium_vinosum_DSM_180	572477	1
GCF_000815225.1	Allofrancisella_guangzhouensis_08HL01032	594679	1
GCF_000172635.2	Alteromonas_macleodii_ATCC_27126	529120	2
GCF_900635495.1	Atlantibacter_hermannii_NCTC12129	565	3
GCF_003864155.1	Avibacterium_paragallinarum_FARPER-174	728	3
GCF_000021045.1	Azotobacter_vinelandii_DJ_ATCC_BAA-1303	322710	2
GCF_002237535.1	Bacterioplanes_sanyensis_NV9	1249553	2
GCF_003711265.1	Bathymodiolus_thermophilus_thioautotrophic_gill_symbiont_EPR9N	2360	1
GCF_000013185.1	Baumannia_cicadellinicola_Hc_Homalodisca_coagulata_Hc_Homalodisca_coagulata	374463	0
GCF_001305575.2	Beggiatoa_leptomitoformis_D-402	288004	1
GCF_000347595.1	Bibersteinia_trehalosi_USDA-ARS-USMARC-192	1171377	3
GCF_002291445.1	Brenneria_goodwinii_FRB141	1109412	4
GCF_000009605.1	Buchnera_aphidicola_APS_Acyrthosiphon_pisum	107806	0
GCF_003675305.1	Buttiauxella_3AFRM03	2479367	3
GCF_001534665.1	Candidatus_Arsenophonus_lipoptenae_CB	634113	0
GCF_000011745.1	Candidatus_Blochmannia_pennsylvanicus_BPEN	291272	0
GCA_000441575.1	Candidatus_Carsonella_ruddii_DC	667013	0
GCF_900039485.1	Candidatus_Doolittlea_endobia	1778262	0
GCF_000953435.1	Candidatus_Evansia_muelleri	1495769	0
GCF_003122425.1	Candidatus_Fukatsuia_symbiotica_5D	1878942	1
GCF_900048035.1	Candidatus_Gullanella_endobia	1070130	0
GCF_002285855.1	Candidatus_Hamiltonella_defensa_Bemisia_tabaci_MEAM1	672795	0
GCF_900044015.1	Candidatus_Hoaglandella_endobia	1778263	0
GCF_000828515.1	Candidatus_Ishikawaella_capsulata_Mpkobe	476281	0
GCF_900048045.1	Candidatus_Mikella_endobia	1778264	0
GCF_000364725.1	Candidatus_Moranella_endobia_PCVAL	1234603	0
GCF_002356115.1	Candidatus_Nitrosoglobus_terrae_TAO100	1630141	0
GCF_000298385.1	Candidatus_Portiera_aleyrodidarum_BT-QVLC	1239881	0
GCF_003391335.1	Candidatus_Purcelliella_pentastirinorum_OLIH	472834	0
GCF_003966755.1	Candidatus_Rickettsiella_viridis_Ap-RA04	676208	0
GCF_000093065.1	Candidatus_Riesia_pediculicola_USDA	515618	0
GCF_000015105.1	Candidatus_Ruthia_magnifica_Cm_Calyptogena_magnifica	413404	0
GCF_000828815.1	Candidatus_Tachikawaea_gelatinosa_UwTKB	1410383	0
GCA_001447805.1	Candidatus_Tenderia_electrophaga	1748243	1
GCF_002813775.1	Candidatus_Thiodictyon_syntrophicum_Cad16T	1166950	1
GCF_001281385.1	Candidatus_Thioglobus_singularis_PS1	1125411	1
GCF_000010405.1	Candidatus_Vesicomyosocius_okutanii_HA	412965	1
GCF_900637305.1	Cardiobacterium_hominis_NCTC10426	2718	2
GCF_003063625.1	Catenovulum_CCB-QB4	2172099	2
GCF_000757825.1	Cedecea_neteri_SSMD04	158822	3
GCF_000019225.1	Cellvibrio_japonicus_Ueda107	498211	2
GCF_000520015.2	Chania_multitudinisentens_RB-25	1441930	3
GCF_002009425.1	Chromatiaceae_bacterium_2141T.STBD.0c.01a	1978339	1
GCF_000055785.1	Chromohalobacter_salexigens_DSM_3043	290398	2
GCF_000648515.1	Citrobacter_freundii_CFNIH1	1333848	3
GCF_001720485.1	Cobetia_marina_JCM_21022	28258	2
GCF_000012325.1	Colwellia_psychrerythraea_34H_BAA-681	167879	2
GCF_000017105.1	Coxiella_burnetii_Dugway_5J108-111	434922	0
GCF_000982825.1	Cronobacter_sakazakii_ATCC_29544	28141	4
GCF_000442595.1	Cycloclasticus_zancles_78-ME	1198232	1
GCF_000015345.1	Dichelobacter_nodosus_VCS1703A	246195	2
GCF_000147055.1	Dickeya_dadantii_3937	198628	3
GCF_001632775.1	Dokdonella_koreensis_DS-123	1300342	1
GCA_000632805.1	Dyella_jiangningensis_SBZ_3-12	1379159	1
GCF_001632845.1	Ectothiorhodospira_BSL-9	1442136	1
GCF_000022885.2	Edwardsiella_ictaluri_93-146	634503	3
GCF_000025565.1	Enterobacter_cloacae_sub_cloacae_ATCC_13047	716541	3
GCF_000027205.1	Erwinia_amylovora_ATCC_49946	716540	3
GCF_000008865.2	Escherichia_coli_O157_H7_Sakai_Sakai_sub_RIMD_0509952	386585	3
GCF_000005845.2	Escherichia_coli_K-12_sub_MG1655	511145	3
GCF_000148645.1	Ferrimonas_balearica_DSM_9799	550540	2
GCF_000008985.1	Francisella_tularensis_sub_tularensis_SCHU_S4	177416	1
GCF_000242255.2	Frateuria_aurantia_DSM_6220	767434	1
GCF_000807275.1	Frischella_perrara_PEB0191	1267021	3
GCF_003367375.1	Gallaecimonas_HK-28	2291597	3
GCF_000209675.1	Gallibacterium_anatis_UMN179	1005058	3
GCF_002291425.1	Gibbsiella_quercinecans_FRB97	929813	3
GCF_000599985.1	Gilliamella_apicola_wkB1	1196095	3
GCF_000212335.1	Glaciecola_4H-3-7YE-5_4H-3-7YE-5	983545	1
GCF_000021885.1	Glaesserella_parasuis_SH0165	557723	2
GCF_002215215.1	Granulosicoccus_antarcticus_IMCC3135	1192854	1
GCF_001558255.2	Grimontia_hollisae_ATCC_33564	673	3
GCF_000940805.1	Gynuella_sunshinyii_YC6258	1445510	2
GCF_000027305.1	Haemophilus_influenzae_Rd_KW20	71421	3
GCF_000597785.2	Hafnia_alvei_FB1	1453496	3
GCF_000012985.1	Hahella_chejuensis_KCTC_2396	349521	1
GCF_001953075.1	Halioglobus_pacificus_RR3-57	930806	1
GCF_000196875.2	Halomonas_elongata_DSM_2581_type_strain_DSM_2581	768066	2
GCF_000015585.1	Halorhodospira_halophila_SL1	349124	1
GCF_001648175.1	Halotalea_alkalilenta_IHB_B_13600	376489	2
GCF_000024765.1	Halothiobacillus_neapolitanus_c2	555778	2
GCF_000019405.1	Histophilus_somni_2336	228400	2
GCF_000012605.1	Hydrogenovibrio_crunogenus_XCL-2	317025	2
GCF_000008465.1	Idiomarina_loihiensis_L2TR	283942	2
GCF_001697225.1	Immundisolibacter_cernigliae_TR3.2	1810504	1
GCF_000024085.1	Kangiella_koreensis_DSM_16069	523791	1
GCF_002863865.1	Ketobacter_alkanivorans_GI5	1917421	1
GCF_000215745.1	Klebsiella_aerogenes_KCTC_2190	1028307	3
GCF_000016305.1	Klebsiella_pneumoniae_sub_pneumoniae_MGH_78578_ATCC_700721	272620	3
GCF_000019565.1	Klebsiella_variicola_342	244366	3
GCF_900635475.1	Kluyvera_intermedia_NCTC12125	61648	3
GCF_000300455.3	Kosakonia_sacchari_SP1	1235834	3
GCF_002157205.1	Kushneria_marisflavi_SW32	157779	2
GCF_001466725.1	Lacimicrobium_alkaliphilum_YelD216	1526571	2
GCF_001518835.1	Leclercia_adecarboxylata_USDA-ARS-USMARC-60222	83655	3
GCF_000008485.1	Legionella_pneumophila_sub_pneumophila_Philadelphia_1	272624	1
GCF_002952735.2	Lelliottia_nimipressuralis_SGAir0187	69220	3
GCF_900478135.1	Leminorella_richardii_NCTC12151	158841	4
GCF_003096015.2	Limnobaculum_parvum_HYN0051	2172103	3
GCF_003515985.1	Lonsdalea_britannica_477	1082704	3
GCF_001887595.1	Luteibacter_rhizovicinus_DSM_16549_LJ96T	1440763	1
GCF_002327105.1	Luteimonas_100111	2006110	1
GCF_002355975.1	Lysobacter_enzymogenes_M497-1	69	1
GCF_000376645.1	Mannheimia_haemolytica_M42548	1316932	3
GCF_000224005.2	Marichromatium_purpuratum_984	765910	1
GCF_000284615.1	Marinobacter_hydrocarbonoclasticus_ATCC_49840	1163748	1
GCF_000017285.1	Marinomonas_MWYL1	400668	2
GCF_003925915.1	Metakosakonia_MRY16-398	2487150	3
GCF_003584645.1	Methylocaldum_marinum_S8	1432792	1
GCF_000008325.1	Methylococcus_capsulatus_Bath	243233	1
GCF_000968535.2	Methylomicrobium_alcaliphilum_20Z	1091494	1
GCF_000214665.1	Methylomonas_methanica_MC09	857087	1
GCF_000260985.4	Methylophaga_nitratireducenticrescens_JAM1	754476	1
GCF_002209385.1	Methylovulum_psychrotolerans_HV10_M2	1704499	1
GCF_001999945.1	Microbulbifer_agarilyticus_GP101	260552	2
GCF_002953195.1	Mixta_gaviniae_DSM_22758	665914	3
GCF_000092265.1	Moraxella_catarrhalis_BBH18	1236608	1
GCF_000286435.2	Morganella_morganii_sub_morganii_KT	1124991	3
GCF_000953735.1	Moritella_viscosa	80854	2
GCF_000024725.1	Nitrosococcus_halophilus_Nc_4	472759	1
GCF_001586165.1	Obesumbacterium_proteus_DSM_2777	82983	3
GCF_001267175.1	Oblitimonas_alkaliphila_B4199	1697053	2
GCF_002117105.1	Oceanicoccus_sagamiensis_NBRC_107125	716816	2
GCF_000243075.1	Oceanimonas_GK1	511062	3
GCF_002157895.1	Oceanisphaera_profunda_SM1222	1416627	2
GCF_002162375.1	Oleiphilus_messinensis_ME102	141451	1
GCF_000967895.1	Oleispira_antarctica_RB-8	698738	2
GCF_000025405.2	Pantoea_ananatis_LMG_20103	706191	3
GCF_000347635.1	Paraglaciecola_psychrophila_170	1129794	1
GCF_002216855.1	Paraphotobacterium_marinum_NSCS20N07D	1755811	0
GCF_000006825.1	Pasteurella_multocida_sub_multocida_Pm70	272843	3
GCF_000260925.1	Pectobacterium_parmentieri_SCC3193	1905730	3
GCF_000196255.1	Photobacterium_profundum_SS9	298386	2
GCF_000196155.1	Photorhabdus_laumondii_sub_laumondii_TTO1	243265	3
GCF_001022135.1	Phytobacter_ursingii_CAV1151	1972431	3
GCF_000300295.4	Piscirickettsia_salmonis_LF-89_ATCC_VR-1361	1227812	1
GCF_000180175.2	Plautia_stali_symbiont	891974	1
GCF_003019855.1	Plesiomonas_shigelloides_MS-17-188	703	3
GCF_000757785.1	Pluralibacter_gergoviae_FB2	61647	4
GCF_001026985.1	Pragia_fontium_24613	82985	3
GCF_000069965.1	Proteus_mirabilis_HI4320	529507	3
GCF_000259175.1	Providencia_stuartii_MRSN_2154	1157951	3
GCF_000014225.1	Pseudoalteromonas_atlantica_T6c	342610	1
GCF_001444425.1	Pseudohongiella_spirulinae_KCTC_32221	1249552	1
GCF_000006765.1	Pseudomonas_aeruginosa_PAO1	208964	2
GCF_000007565.2	Pseudomonas_putida_KT2440	160488	2
GCF_000013785.1	Pseudomonas_stutzeri_A1501	379731	2
GCF_000012245.1	Pseudomonas_syringae_pv._syringae_B728a	205918	2
GCF_000233915.3	Pseudoxanthomonas_spadix_BD-a59	1045855	1
GCF_000012305.1	Psychrobacter_arcticus_273-4	259536	1
GCF_000015285.1	Psychromonas_ingrahamii_37	357804	2
GCF_000187705.1	Rahnella_Y9602	741091	3
GCF_000367425.1	Raoultella_ornithinolytica_B6	1286170	4
GCF_002795845.1	Reinekea_forsetii_Hel1_31_D35	1336806	2
GCF_003990335.1	Rheinheimera_LHK132	2498451	4
GCF_000230695.2	Rhodanobacter_denitrificans_2APBS1	666685	1
GCA_900637805.1	Rodentibacter_pneumotropicus	1122936	7
GCF_000013665.1	Saccharophagus_degradans_2-40	203122	2
GCF_003367315.1	Saccharospirillum_mangrovi_HK-33	2161747	1
GCF_003006155.1	Salinicola_tamaricis_F01	1771309	2
GCF_003429285.1	Salinimonas_N102	2303538	2
GCF_003177035.1	Salinisphaera_LB1	2183911	1
GCF_000006945.2	Salmonella_enterica_sub_enterica_serovar_Typhimurium_LT2	99287	3
GCF_000287335.1	secondary_endosymbiont_of_Ctenarytaina_eucalypti	1199245	0
GCF_001007875.1	Sedimenticola_thiotaurini_SIP-G1	1543721	1
GCF_000513215.1	Serratia_marcescens_sub_marcescens_Db11	273526	3
GCF_000146165.2	Shewanella_oneidensis_MR-1	211586	3
GCF_000012005.1	Shigella_dysenteriae_Sd197	300267	3
GCF_000006925.2	Shigella_flexneri_2a_301	198214	3
GCF_000262305.1	Shimwellia_blattae_DSM_4481_NBRC_105725	630626	3
GCF_000305785.2	Simiduia_agarivorans_SA1_DSM_21679_SA1_DSM_21679	1117647	2
GCF_000010085.1	Sodalis_glossinidius_morsitans	343509	1
GCF_003428335.1	Solimonas_K1W22B-7	2303331	1
GCF_000319575.2	Spiribacter_salinus_M19-40	1260251	1
GCF_001010805.1	Spongiibacter_IMCC21906	1620392	2
GCF_000072485.1	Stenotrophomonas_maltophilia_K279a	522373	1
GCF_001579945.1	Steroidobacter_denitrificans_DSM_18526	465721	2
GCF_002355735.1	Sulfuricaulis_limicola_HA5	1620215	1
GCF_003967195.1	Sulfuriflexus_mobilis_aks1	1811807	1
GCF_002355415.1	Sulfurifustis_variabilis_skN76	1675686	2
GCF_004001245.1	Sulfurivermis_fontis_JG42	1972068	2
GCF_000953635.1	Tatlockia_micdadei_ATCC_33218	451	1
GCF_002163585.1	Tatumella_citrea_DSM_13699	53336	2
GCF_000023025.1	Teredinibacter_turnerae_T7901	377629	2
GCF_000355675.1	Thalassolituus_oleivorans_MIL-1	1298593	2
GCF_001831495.1	Thalassotalea_crassostreae_LPB0090	1763536	2
GCF_000321415.2	Thioalkalivibrio_nitratireducens_DSM_14787	1255043	1
GCF_000227745.2	Thiocystis_violascens_DSM_198	765911	1
GCF_000327045.1	Thioflavicoccus_mobilis_8321	765912	1
GCF_002356355.1	Thiohalobacter_thiocyanaticus_FOKN1	585455	1
GCF_000828615.1	Thiolapillus_brandeum_Hiromi_1	1076588	1
GCF_004293625.1	Thiomicrorhabdus_13-15A	2267253	2
GCF_000214825.1	Thiomicrospira_cyclica_ALM1	717773	2
GCF_000828835.1	Thioploca_ingrica	40754	0
GCF_000023065.1	Tolumonas_auensis_DSM_9187	595494	3
GCF_000462975.1	Vibrio_anguillarum_M3	882944	3
GCF_000006745.1	Vibrio_cholerae_O1_biovar_El_Tor_N16961	243277	3
GCF_000196095.1	Vibrio_parahaemolyticus_RIMD_2210633	223926	2
GCF_001187785.1	Wenzhouxiangella_marina_KCTC_42284	1579979	1
GCF_000247565.1	Wigglesworthia_glossinidia_endosymbiont_of_Glossina_morsitans_morsitans_Yale_colony	1142511	0
GCF_001677435.1	Woeseia_oceani_XK5	1548547	1
GCF_000007145.1	Xanthomonas_campestris_pv._campestris_ATCC_33913	190485	1
GCF_000019585.2	Xanthomonas_oryzae_pv._oryzae_PXO99A	360094	1
GCF_000953355.1	Xenorhabdus_nematophila_AN61	1437823	3
GCF_000006725.1	Xylella_fastidiosa_9a5c	160492	1
GCF_000009345.1	Yersinia_enterocolitica_sub_enterocolitica_8081	393305	3
GCF_000009065.1	Yersinia_pestis_CO92	214092	2
GCF_001586255.1	Zhongshania_aliphaticivorans_SM2	1470434	3
GCF_002407485.1	Zobellella_denitrificans_F13-1	347534	3
GCF_003610015.1	Zymobacter_palmae_IAM14233	33074	2

OTHER PROTEOBACTERIA [6/6 organisms 9 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000021485.1	Acidithiobacillus_ferrooxidans_ATCC_23270	243159	1
GCF_003574215.1	Hydrogenophilus_thermoluteolus_TH-1	297	1
GCF_002872415.1	Bacteriovorax_stolpii_DSM_12778	960	3
GCF_000196175.1	Bdellovibrio_bacteriovorus_HD100	264462	2
GCF_000210915.2	Halobacteriovorax_marinus_SJ	862908	1
GCF_002795805.1	Mariprofundus_aestuarium_CP-5	1921086	1

SPIROCHAETES [8/11 organisms 15 genes]

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Assembly	Genome	TaxID	No. genes
GCF_001660005.1	Borrelia_hermsii_HS1	1867252	0
GCF_000008685.2	Borreliella_burgdorferi_B31	224326	0
GCF_000223215.1	Brachyspira_intermedia_PWSA	1045858	1
GCF_000017605.1	Leptospira_biflexa_serovar_Patoc_strain_Patoc_1_Ames__Patoc_1_Ames	355278	3
GCF_000092565.1	Leptospira_interrogans_serovar_Lai_56601	189518	3
GCF_000507245.1	Salinispira_pacifica_L21-RPul-D2	1307761	2
GCF_000143985.1	Sediminispirochaeta_smaragdinae_DSM_11293	573413	1
GCF_000236685.1	Sphaerochaeta_pleomorpha_Grapes	158190	2
GCF_000008185.1	Treponema_denticola_ATCC_35405	243275	1
GCF_000604125.1	Treponema_pallidum_sub_pallidum_Sea_81-4	1095955	0
GCF_000266885.1	Turneriella_parva_DSM_21527	869212	2

SYNERGISTETES [5/5 organisms 7 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000266925.1	Acetomicrobium_mobile_DSM_13181	891968	1
GCF_000025885.1	Aminobacterium_colombiense_DSM_12261	572547	2
GCF_001701045.1	Cloacibacillus_porcorum_CL-84	1197717	1
GCF_000024905.1	Thermanaerovibrio_acidaminovorans_DSM_6589	525903	2
GCF_000233775.1	Thermovirga_lienii_DSM_17291	580340	1

THERMOTOGAE [8/9 organisms 11 genes]

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Assembly	Genome	TaxID	No. genes
GCF_000953715.1	Defluviitoga_tunisiensis	1006576	2
GCF_000235405.2	Fervidobacterium_pennivorans_DSM_9078	771875	1
GCF_000023325.1	Kosmotoga_olearia_TBF_19.5.1	521045	1
GCF_000255135.1	Marinitoga_piezophila_KA3	443254	2
GCF_000147715.2	Mesotoga_prima_MesG1.Ag.4.2	660470	1
GCF_000018605.1	Petrotoga_mobilis_SJ95	403833	2
GCF_000017865.1	Pseudothermotoga_lettingae_TMO	416591	0
GCF_000021285.1	Thermosipho_africanus_TCF52B	484019	1
GCF_000008545.1	Thermotoga_maritima_MSB8	243274	1

VERRUCOMICROBIA [8/9 organisms 8 genes]

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Assembly	Genome	TaxID	No. genes
GCF_002310495.1	Verrucomicrobia_bacterium_HZ-65	2026799	1
GCF_000972765.1	Verrucomicrobia_bacterium_IMCC26134	1637999	1
GCF_000019665.1	Methylacidiphilum_infernorum_V4	481448	1
GCF_000025905.1	Coraliomargarita_akajimensis_DSM_45221	583355	1
GCF_001746835.1	Lacunisphaera_limnophila_IG16b	1838286	1
GCF_000242935.2	Opitutaceae_bacterium_TAV5	794903	1
GCF_000019965.1	Opitutus_terrae_PB90-1	452637	1
GCF_001318295.1	Candidatus_Xiphinematobacter_Idaho_Grape	1704307	0
GCF_000020225.1	Akkermansia_muciniphila_ATCC_BAA-835	349741	1

OTHER BACTERIA [29/48 organisms 31 genes]

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Assembly	Genome	TaxID	No. genes
GCA_002162075.1	Armatimonadetes_bacterium_Uphvl-Ar1	2004467	0
GCF_000724625.1	Fimbriimonas_ginsengisoli_Gsoil_348	661478	0
GCF_003353065.1	Candidatus_Cyclonatronum_proteinivorum_Omega	1457365	1
GCF_000284335.1	Caldisericum_exile_AZM16c01	511051	0
GCF_001886815.1	Caldithrix_abyssi_DSM_13497_LF13	880073	1
GCA_001029795.1	candidate_division_Kazan_bacterium_GW2011_GWA1_50_15	1620412	0
GCA_000091165.1	Candidatus_Methylomirabilis_oxyfera	671143	0
GCA_001007975.1	candidate_division_SR1_bacterium_Aalborg_AAW-1	1643353	1
GCA_000503875.1	candidate_division_SR1_bacterium_RAAC1_SR1_1	1394709	1
GCA_000503835.1	candidate_division_WWE3_bacterium_RAAC2_WWE3_1	1394710	0
GCA_001029675.1	Candidatus_Beckwithbacteria_bacterium_GW2011_GWC1_49_16	1618372	0
GCA_001029735.1	Berkelbacteria_bacterium_GW2011_GWE1_39_12	1618337	0
GCF_900465355.1	Candidatus_Bipolaricaulis_anaerobius	2026885	0
GCF_000146065.2	Candidatus_Cloacimonas_acidaminovorans_Evry	459349	1
GCF_000513475.1	Candidatus_Babela_massiliensis_673862	673862	0
GCA_001029715.1	candidate_division_TM6_bacterium_GW2011_GWF2_28_16	1619077	0
GCF_003366055.1	Candidatus_Dependentiae_bacterium_ex_Spumella_elongata_CCAP_9551_SeV1	2066483	0
GCF_002761215.1	Candidatus_Gracilibacteria_bacterium_HOT-871	1540872	1
GCA_001430755.1	Candidatus_Peribacter_riflensis	1735162	1
GCA_000503915.1	Candidatus_Saccharibacteria_bacterium_RAAC3_TM7_1	1394711	1
GCF_002952755.1	Candidatus_Saccharibacteria_bacterium_YM_S32_TM7_50_20	2056494	1
GCF_000803625.1	Candidatus_Saccharibacteria_oral_taxon_TM7x	1476577	1
GCF_000392435.1	Candidatus_Saccharimonas_aalborgensis	1332188	1
GCA_001029755.1	Candidatus_Woesebacteria_bacterium_GW2011_GWF1_31_35	1618600	0
GCA_001029635.1	Candidatus_Wolfebacteria_bacterium_GW2011_GWB1_47_1	1619007	0
GCF_000177635.2	Desulfurispirillum_indicum_S5	653733	1
GCF_000020945.1	Coprothermobacter_proteolyticus_DSM_5265	309798	1
GCF_000020965.1	Dictyoglomus_thermophilum_H-6-12_ATCC_35947	309799	1
GCF_000020145.1	Elusimicrobium_minutum_Pei191	445932	1
GCF_001027545.1	Endomicrobium_proavitum_Rsa215	1408281	1
GCF_000146025.2	uncultured_Termite_group_1_bacterium_phylotype_Rs-D17	471821	1
GCF_000024665.1	Fibrobacter_succinogenes_sub_succinogenes_S85	59374	2
GCF_000010305.1	Gemmatimonas_aurantiaca_T-27	379066	1
GCF_000522985.1	Gemmatirosa_kalamazoonesis_KBS708	861299	1
GCF_000258405.1	Ignavibacterium_album_JCM_16511	945713	1
GCF_000279145.1	Melioribacter_roseus_P3M-2	1191523	1
GCF_001017655.1	Kiritimatiella_glycovorans_L21-Fru-AB	1307763	1
GCF_002998355.1	Victivallales_bacterium_CCUG_44730	2094242	1
GCF_000299235.1	Leptospirillum_ferriphilum_ML-04	1048260	0
GCF_000196815.1	Nitrospira_defluvii	330214	0
GCF_000020985.1	Thermodesulfovibrio_yellowstonii_DSM_11347	289376	1
GCF_001548275.1	Caldimicrobium_thiodismutans_TF1	1653476	1
GCF_000217795.1	Thermodesulfatator_indicus_DSM_15286	667014	1
GCF_000215975.1	Thermodesulfobacterium_geofontis_OPF15	795359	1
GCA_001029775.1	Candidatus_Campbellbacteria_bacterium_GW2011_OD1_34_28	1618633	0
GCA_001729625.1	bacterium_AB1	1898108	0
GCF_004102945.1	Vampirococcus_LiM	1930593	0
GCF_000025005.1	Thermobaculum_terrenum_ATCC_BAA-798	525904	2

Assembly:
TaxID:
Category:

COGs

GeneTag	Protein	Protein Length	FootPrint	FootPrint Length	Bitscore	E-Value	Profile Length	Protein coords	Membership

J - COG2265 - tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family

Basic Stats

Taxonomy Categories

ARCHAEA

+CRENARCHAEOTA [5/25 organisms 5 genes]

+EURYARCHAEOTA [18/79 organisms 29 genes]

THAUMARCHAEOTA [0/12 organisms 0 genes]

+OTHER ARCHAEA [1/6 organisms 1 genes]

BACTERIA

+ACIDOBACTERIA [7/7 organisms 8 genes]

+ACTINOBACTERIA [150/155 organisms 230 genes]

+AQUIFICAE [9/9 organisms 9 genes]

+BACTEROIDETES [99/107 organisms 136 genes]

+CHLAMYDIAE [6/6 organisms 11 genes]

+CHLOROBI [5/5 organisms 9 genes]

+CHLOROFLEXI [12/14 organisms 17 genes]

+CYANOBACTERIA [40/41 organisms 45 genes]

+DEFERRIBACTERES [5/5 organisms 5 genes]

+DEINOCOCCUS-THERMUS [6/6 organisms 6 genes]

FIRMICUTES

+BACILLI [73/73 organisms 128 genes]

+CLOSTRIDIA [79/79 organisms 127 genes]

+NEGATIVICUTES [10/10 organisms 13 genes]

+TISSIERELLIA [9/9 organisms 18 genes]

+OTHER FIRMICUTES [4/4 organisms 7 genes]

+FUSOBACTERIA [6/6 organisms 11 genes]

+MOLLICUTES [3/14 organisms 9 genes]

+PLANCTOMYCETES [1/14 organisms 2 genes]

PROTEOBACTERIA

+ALPHAPROTEOBACTERIA [135/158 organisms 140 genes]

+BETAPROTEOBACTERIA [96/102 organisms 116 genes]

+DELTAPROTEOBACTERIA [36/39 organisms 55 genes]

+EPSILONPROTEOBACTERIA [11/12 organisms 14 genes]

+GAMMAPROTEOBACTERIA [199/224 organisms 407 genes]

+OTHER PROTEOBACTERIA [6/6 organisms 9 genes]

+SPIROCHAETES [8/11 organisms 15 genes]

+SYNERGISTETES [5/5 organisms 7 genes]

+THERMOTOGAE [8/9 organisms 11 genes]

+VERRUCOMICROBIA [8/9 organisms 8 genes]

+OTHER BACTERIA [29/48 organisms 31 genes]

COGs

CRENARCHAEOTA [5/25 organisms 5 genes]

EURYARCHAEOTA [18/79 organisms 29 genes]

OTHER ARCHAEA [1/6 organisms 1 genes]

ACIDOBACTERIA [7/7 organisms 8 genes]

ACTINOBACTERIA [150/155 organisms 230 genes]

AQUIFICAE [9/9 organisms 9 genes]

BACTEROIDETES [99/107 organisms 136 genes]

CHLAMYDIAE [6/6 organisms 11 genes]

CHLOROBI [5/5 organisms 9 genes]

CHLOROFLEXI [12/14 organisms 17 genes]

CYANOBACTERIA [40/41 organisms 45 genes]

DEFERRIBACTERES [5/5 organisms 5 genes]

DEINOCOCCUS-THERMUS [6/6 organisms 6 genes]

BACILLI [73/73 organisms 128 genes]

CLOSTRIDIA [79/79 organisms 127 genes]

NEGATIVICUTES [10/10 organisms 13 genes]

TISSIERELLIA [9/9 organisms 18 genes]

OTHER FIRMICUTES [4/4 organisms 7 genes]

FUSOBACTERIA [6/6 organisms 11 genes]

MOLLICUTES [3/14 organisms 9 genes]

PLANCTOMYCETES [1/14 organisms 2 genes]

ALPHAPROTEOBACTERIA [135/158 organisms 140 genes]

BETAPROTEOBACTERIA [96/102 organisms 116 genes]

DELTAPROTEOBACTERIA [36/39 organisms 55 genes]

EPSILONPROTEOBACTERIA [11/12 organisms 14 genes]

GAMMAPROTEOBACTERIA [199/224 organisms 407 genes]

OTHER PROTEOBACTERIA [6/6 organisms 9 genes]

SPIROCHAETES [8/11 organisms 15 genes]

SYNERGISTETES [5/5 organisms 7 genes]

THERMOTOGAE [8/9 organisms 11 genes]

VERRUCOMICROBIA [8/9 organisms 8 genes]

OTHER BACTERIA [29/48 organisms 31 genes]