We're always interested in possible postdocs & students. If interested, please email me for more information.
In 2023/24, we're organizing the Text Mining COSI at ISMB
, BioCreative VIII
, & Workshop on Generative AI and LLMs at PSB
. Come and join us for these scientific events!
Call for JAMIA special issue on ChatGPT and LLMs in Biomedicine and Health details here
Recent NLP/AI tools
1. PhenoTagger: a hybrid method for phenotyping with HPO. Read our recent publication in Bioinformatics
2. The source code for DeepSeeNet
, a novel deep learning framework for automated AMD diagnosis is now publicly available. Its details are recently published in Ophthalmology
Web-based Lit Search Tools
: a system for literature recommendation and curation. NAR 2021.
: a collaborative text/corpus annotation tool. NAR 2020.
PubTator: Automated concept annotation for full-text articles. NAR 2013, 2019.
: Making sense of biomedical literature at sentence level. NAR 2019.
: a semantic literature search engine for genomic variants. NAR 2018.
ChestX-ray14 Data Release