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Items: 20

1.

Coordinated Changes in Gene Expression Throughout Encystation of Giardia intestinalis.

Einarsson E, Troell K, Hoeppner MP, Grabherr M, Ribacke U, Svärd SG.

PLoS Negl Trop Dis. 2016 Mar 25;10(3):e0004571. doi: 10.1371/journal.pntd.0004571.

2.

Strand-specific RNA sequencing in Plasmodium falciparum malaria identifies developmentally regulated long non-coding RNA and circular RNA.

Broadbent KM, Broadbent JC, Ribacke U, Wirth D, Rinn JL, Sabeti PC.

BMC Genomics. 2015 Jun 13;16:454. doi: 10.1186/s12864-015-1603-4.

3.

The cytoplasmic prolyl-tRNA synthetase of the malaria parasite is a dual-stage target of febrifugine and its analogs.

Herman JD, Pepper LR, Cortese JF, Estiu G, Galinsky K, Zuzarte-Luis V, Derbyshire ER, Ribacke U, Lukens AK, Santos SA, Patel V, Clish CB, Sullivan WJ Jr, Zhou H, Bopp SE, Schimmel P, Lindquist S, Clardy J, Mota MM, Keller TL, Whitman M, Wiest O, Wirth DF, Mazitschek R.

Sci Transl Med. 2015 May 20;7(288):288ra77. doi: 10.1126/scitranslmed.aaa3575.

4.

A genomic and evolutionary approach reveals non-genetic drug resistance in malaria.

Herman JD, Rice DP, Ribacke U, Silterra J, Deik AA, Moss EL, Broadbent KM, Neafsey DE, Desai MM, Clish CB, Mazitschek R, Wirth DF.

Genome Biol. 2014;15(11):511.

5.

Immune characterization of Plasmodium falciparum parasites with a shared genetic signature in a region of decreasing transmission.

Bei AK, Diouf A, Miura K, Larremore DB, Ribacke U, Tullo G, Moss EL, Neafsey DE, Daniels RF, Zeituni AE, Nosamiefan I, Volkman SK, Ahouidi AD, Ndiaye D, Dieye T, Mboup S, Buckee CO, Long CA, Wirth DF.

Infect Immun. 2015 Jan;83(1):276-85. doi: 10.1128/IAI.01979-14.

6.

Improved in vitro culture of Plasmodium falciparum permits establishment of clinical isolates with preserved multiplication, invasion and rosetting phenotypes.

Ribacke U, Moll K, Albrecht L, Ahmed Ismail H, Normark J, Flaberg E, Szekely L, Hultenby K, Persson KE, Egwang TG, Wahlgren M.

PLoS One. 2013 Jul 22;8(7):e69781. doi: 10.1371/journal.pone.0069781.

7.

Acquired antibodies to merozoite antigens in children from Uganda with uncomplicated or severe Plasmodium falciparum malaria.

Ahmed Ismail H, Ribacke U, Reiling L, Normark J, Egwang T, Kironde F, Beeson JG, Wahlgren M, Persson KE.

Clin Vaccine Immunol. 2013 Aug;20(8):1170-80. doi: 10.1128/CVI.00156-13.

8.

Genetic diversity of Plasmodium falciparum infections in mild and severe malaria of children from Kampala, Uganda.

Kiwuwa MS, Ribacke U, Moll K, Byarugaba J, Lundblom K, Färnert A, Fred K, Wahlgren M.

Parasitol Res. 2013 Apr;112(4):1691-700. doi: 10.1007/s00436-013-3325-3.

9.

Nuclear repositioning precedes promoter accessibility and is linked to the switching frequency of a Plasmodium falciparum invasion gene.

Coleman BI, Ribacke U, Manary M, Bei AK, Winzeler EA, Wirth DF, Duraisingh MT.

Cell Host Microbe. 2012 Dec 13;12(6):739-50. doi: 10.1016/j.chom.2012.11.004.

10.

Sequence-based association and selection scans identify drug resistance loci in the Plasmodium falciparum malaria parasite.

Park DJ, Lukens AK, Neafsey DE, Schaffner SF, Chang HH, Valim C, Ribacke U, Van Tyne D, Galinsky K, Galligan M, Becker JS, Ndiaye D, Mboup S, Wiegand RC, Hartl DL, Sabeti PC, Wirth DF, Volkman SK.

Proc Natl Acad Sci U S A. 2012 Aug 7;109(32):13052-7. doi: 10.1073/pnas.1210585109.

11.

A global transcriptional analysis of Plasmodium falciparum malaria reveals a novel family of telomere-associated lncRNAs.

Broadbent KM, Park D, Wolf AR, Van Tyne D, Sims JS, Ribacke U, Volkman S, Duraisingh M, Wirth D, Sabeti PC, Rinn JL.

Genome Biol. 2011 Jun 20;12(6):R56. doi: 10.1186/gb-2011-12-6-r56.

12.

Antimalarial exposure delays Plasmodium falciparum intra-erythrocytic cycle and drives drug transporter genes expression.

Veiga MI, Ferreira PE, Schmidt BA, Ribacke U, Björkman A, Tichopad A, Gil JP.

PLoS One. 2010 Aug 25;5(8):e12408. doi: 10.1371/journal.pone.0012408.

13.

MYCN-regulated microRNAs repress estrogen receptor-alpha (ESR1) expression and neuronal differentiation in human neuroblastoma.

Lovén J, Zinin N, Wahlström T, Müller I, Brodin P, Fredlund E, Ribacke U, Pivarcsi A, Påhlman S, Henriksson M.

Proc Natl Acad Sci U S A. 2010 Jan 26;107(4):1553-8. doi: 10.1073/pnas.0913517107.

14.

Simultaneous transcription of duplicated var2csa gene copies in individual Plasmodium falciparum parasites.

Brolin KJ, Ribacke U, Nilsson S, Ankarklev J, Moll K, Wahlgren M, Chen Q.

Genome Biol. 2009;10(10):R117. doi: 10.1186/gb-2009-10-10-r117.

15.

SURFIN4.1, a schizont-merozoite associated protein in the SURFIN family of Plasmodium falciparum.

Mphande FA, Ribacke U, Kaneko O, Kironde F, Winter G, Wahlgren M.

Malar J. 2008 Jul 1;7:116. doi: 10.1186/1475-2875-7-116.

16.

Default Pathway of var2csa switching and translational repression in Plasmodium falciparum.

Mok BW, Ribacke U, Rasti N, Kironde F, Chen Q, Nilsson P, Wahlgren M.

PLoS One. 2008 Apr 23;3(4):e1982. doi: 10.1371/journal.pone.0001982.

17.

A highly conserved segmental duplication in the subtelomeres of Plasmodium falciparum chromosomes varies in copy number.

Mok BW, Ribacke U, Sherwood E, Wahlgren M.

Malar J. 2008 Mar 7;7:46. doi: 10.1186/1475-2875-7-46.

18.

PfEMP1-DBL1alpha amino acid motifs in severe disease states of Plasmodium falciparum malaria.

Normark J, Nilsson D, Ribacke U, Winter G, Moll K, Wheelock CE, Bayarugaba J, Kironde F, Egwang TG, Chen Q, Andersson B, Wahlgren M.

Proc Natl Acad Sci U S A. 2007 Oct 2;104(40):15835-40.

19.

A novel DBL-domain of the P. falciparum 332 molecule possibly involved in erythrocyte adhesion.

Moll K, Chêne A, Ribacke U, Kaneko O, Nilsson S, Winter G, Haeggström M, Pan W, Berzins K, Wahlgren M, Chen Q.

PLoS One. 2007 May 30;2(5):e477.

20.

Release of sequestered malaria parasites upon injection of a glycosaminoglycan.

Vogt AM, Pettersson F, Moll K, Jonsson C, Normark J, Ribacke U, Egwang TG, Ekre HP, Spillmann D, Chen Q, Wahlgren M.

PLoS Pathog. 2006 Sep;2(9):e100.

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